NZ_NAYY01000008.1	padloc	CRISPR_array	247271	248295	6.26	-	.	Name=CRISPR_array;HMM.accession=NA;HMM.name=NA;Target.coverage=NA;HMM.coverage=NA;Alt=NA
NZ_NAYY01000008.1	padloc	cas_type_II-A	248396	249061	1.2999999999999997e-107	-	.	Name=Csn2;HMM.accession=PDLC01371;HMM.name=cd09758;Target.coverage=0.977;HMM.coverage=0.991;Alt=PDLC01371, cd09758, 1.3e-107, 0.977, 0.991 | PDLC02121, Csn2_WP_159082072.1, 2.5e-102, 0.977, 0.991 | PDLC01648, pfam09711, 5.6e-73, 0.792, 0.994 | PDLC01023, cas_Csn2, 8.6e-51, 0.964, 0.995 | PDLC02119, Csn2_WP_115483433.1, 2.8e-32, 0.946, 0.973
NZ_NAYY01000008.1	padloc	cas_type_II-A	249048	249389	1.5e-44	-	.	Name=Cas2_II;HMM.accession=PDLC02068;HMM.name=Cas2_II_WP_167337171.1;Target.coverage=0.973;HMM.coverage=0.774;Alt=PDLC02068, Cas2_II_WP_167337171.1, 1.5e-44, 0.973, 0.774 | PDLC02072, Cas2_II_WP_038817100.1, 1.7e-35, 0.628, 0.986 | PDLC02073, Cas2_II_WP_029776276.1, 5.5e-31, 0.425, 0.98 | PDLC02071, Cas2_II_WP_086428212.1, 2e-29, 0.814, 0.959 | PDLC02069, Cas2_II_WP_178005650.1, 9.1e-26, 0.858, 0.754
NZ_NAYY01000008.1	padloc	cas_type_II-A	249386	250255	8.499999999999999e-105	-	.	Name=Cas1_II;HMM.accession=PDLC02061;HMM.name=Cas1_II_WP_078484493.1;Target.coverage=0.969;HMM.coverage=0.8;Alt=PDLC02061, Cas1_II_WP_078484493.1, 8.5e-105, 0.969, 0.8 | PDLC02062, Cas1_II_WP_122951193.1, 9.1e-17, 0.869, 0.883
NZ_NAYY01000008.1	padloc	cas_type_II-A	250257	254369	0	-	.	Name=Cas9;HMM.accession=PDLC01460;HMM.name=COG3513;Target.coverage=0.995;HMM.coverage=0.998;Alt=PDLC00973, cas_Csn1, 0, 0.762, 0.999 | PDLC00975, cas9_maka_4_II, 0, 0.995, 0.997 | PDLC01460, COG3513, 0, 0.995, 0.998 | PDLC01256, cd09643, 6.4e-286, 0.761, 0.999 | PDLC01580, mkCas0193, 6.9e-278, 0.996, 0.998
NZ_NAYY01000012.1	padloc	gabija	5747	7792	8.199999999999996e-212	+	.	Name=GajA;HMM.accession=PDLC00080;HMM.name=GajA_00020;Target.coverage=0.984;HMM.coverage=0.995;Alt=PDLC00080, GajA_00020, 8.2e-212, 0.984, 0.995 | PDLC00099, GajA_00039, 8.9e-175, 0.987, 0.99 | PDLC00096, GajA_00036, 2e-125, 0.99, 0.981 | PDLC00091, GajA_00031, 7.7e-93, 0.99, 0.995 | PDLC00071, GajA_00011, 4.3e-88, 0.988, 0.995
NZ_NAYY01000012.1	padloc	gabija	7785	9605	4.8999999999999985e-225	+	.	Name=GajB;HMM.accession=PDLC00126;HMM.name=GajB_00024;Target.coverage=0.995;HMM.coverage=0.987;Alt=PDLC00126, GajB_00024, 4.9e-225, 0.995, 0.987 | PDLC00131, GajB_00029, 4.7e-82, 0.609, 0.589 | PDLC00147, GajB_00045, 5.3e-60, 0.551, 0.52 | PDLC00105, GajB_00003, 4.5e-45, 0.622, 0.575 | PDLC00139, GajB_00037, 2.2e-41, 0.576, 0.537
NZ_NAYY01000012.1	padloc	RM_type_IIG	1046	5743	0	+	.	Name=REase_MTase_IIG;HMM.accession=PDLC03597;HMM.name=REase_MTase_IIG_00002;Target.coverage=0.998;HMM.coverage=0.995;Alt=PDLC03597, REase_MTase_IIG_00002, 0, 0.998, 0.995 | PDLC03621, REase_MTase_IIG_00026, 2.3e-117, 0.521, 0.805 | PDLC03631, REase_MTase_IIG_00036, 1.6e-49, 0.477, 0.708 | PDLC03610, REase_MTase_IIG_00015, 7.4e-30, 0.303, 0.444
NZ_NAYY01000012.1	padloc	DMS_other	5747	7792	1.7e-10	+	.	Name=mad3;HMM.accession=PDLC04135;HMM.name=mads_3;Target.coverage=0.495;HMM.coverage=0.893;Alt=PDLC04135, mads_3, 1.7e-10, 0.495, 0.893 | PDLC04136, mads_4, 0.00068, 0.109, 0.636 | PDLC03660, mREase_IV_00006, 0.0016, 0.079, 0.128 | PDLC02739, PbeC_00031, 0.0035, 0.088, 0.093 | PDLC04140, mads_8, 0.0036, 0.435, 0.653
NZ_NAYY01000029.1	padloc	RM_type_I	673	3650	2.3999999999999994e-164	+	.	Name=REase_I;HMM.accession=PDLC03048;HMM.name=REase_I_00009;Target.coverage=0.953;HMM.coverage=0.961;Alt=PDLC03048, REase_I_00009, 2.4e-164, 0.953, 0.961 | PDLC03046, REase_I_00007, 2e-155, 0.991, 0.993 | PDLC03045, REase_I_00006, 7.6e-92, 0.719, 0.718 | PDLC03040, REase_I_00001, 8e-43, 0.734, 0.699 | PDLC03044, REase_I_00005, 2.8e-31, 0.353, 0.331
NZ_NAYY01000029.1	padloc	RM_type_I	3663	4862	2.099999999999999e-152	+	.	Name=Specificity_I;HMM.accession=PDLC03185;HMM.name=Specificity_I_00134;Target.coverage=0.997;HMM.coverage=0.998;Alt=PDLC03185, Specificity_I_00134, 2.1e-152, 0.997, 0.998 | PDLC03078, Specificity_I_00027, 2.7e-72, 0.997, 0.998 | PDLC03178, Specificity_I_00127, 2.3e-71, 0.997, 0.998 | PDLC03124, Specificity_I_00073, 1.3e-65, 0.997, 0.995 | PDLC03064, Specificity_I_00013, 8.9e-61, 0.629, 0.628
NZ_NAYY01000029.1	padloc	RM_type_I	4875	5666	5.4e-33	+	.	Name=MTase_I;HMM.accession=PDLC03020;HMM.name=MTase_I_00003;Target.coverage=0.863;HMM.coverage=0.537;Alt=PDLC03022, MTase_I_00005, 3e-55, 0.856, 0.256 | PDLC03020, MTase_I_00003, 5.4e-33, 0.863, 0.537 | PDLC03031, MTase_I_00014, 2.3e-31, 0.852, 0.253 | PDLC03035, MTase_I_00018, 6.2e-21, 0.852, 0.303 | PDLC03029, MTase_I_00012, 2.1e-20, 0.867, 0.325
NZ_NAYY01000029.1	padloc	DMS_other	21448	22395	6.900000000000001e-59	+	.	Name=MTase_II;HMM.accession=PDLC03272;HMM.name=MTase_II_00058;Target.coverage=0.99;HMM.coverage=0.774;Alt=PDLC03272, MTase_II_00058, 6.9e-59, 0.99, 0.774 | PDLC03388, MTase_II_00174, 3.7e-42, 0.787, 0.667 | PDLC03378, MTase_II_00164, 1.8e-36, 0.581, 0.526 | PDLC03361, MTase_II_00147, 3.9e-34, 0.981, 0.763 | PDLC03242, MTase_II_00028, 3e-32, 0.965, 0.709
NZ_NAYY01000029.1	padloc	RM_type_II	31880	32902	1.8999999999999996e-124	+	.	Name=MTase_II;HMM.accession=PDLC03378;HMM.name=MTase_II_00164;Target.coverage=0.962;HMM.coverage=0.962;Alt=PDLC03378, MTase_II_00164, 1.9e-124, 0.962, 0.962 | PDLC03272, MTase_II_00058, 3.8e-89, 0.962, 0.784 | PDLC03234, MTase_II_00020, 5.2e-59, 0.571, 0.547 | PDLC03326, MTase_II_00112, 5.6e-55, 0.55, 0.507 | PDLC03217, MTase_II_00003, 5.1e-43, 0.941, 0.445
NZ_NAYY01000029.1	padloc	RM_type_II	32916	33872	4.599999999999999e-127	+	.	Name=REase_II;HMM.accession=PDLC03430;HMM.name=REase_II_00032;Target.coverage=0.987;HMM.coverage=0.991;Alt=PDLC03430, REase_II_00032, 4.6e-127, 0.987, 0.991
NZ_NAYY01000029.1	padloc	RM_type_II	33914	35797	1.7e-34	+	.	Name=REase_II;HMM.accession=PDLC03485;HMM.name=REase_II_00087;Target.coverage=0.558;HMM.coverage=0.581;Alt=PDLC03485, REase_II_00087, 1.7e-34, 0.558, 0.581 | PDLC03419, REase_II_00021, 1.4e-25, 0.295, 0.282
NZ_NAYY01000029.1	padloc	RM_type_II	35828	37081	8.699999999999999e-97	+	.	Name=MTase_II;HMM.accession=PDLC03232;HMM.name=MTase_II_00018;Target.coverage=0.986;HMM.coverage=0.985;Alt=PDLC03232, MTase_II_00018, 8.7e-97, 0.986, 0.985 | PDLC03378, MTase_II_00164, 7e-78, 0.99, 0.962 | PDLC03234, MTase_II_00020, 2.9e-77, 0.993, 0.976 | PDLC03326, MTase_II_00112, 4.6e-65, 0.743, 0.75 | PDLC03272, MTase_II_00058, 6.9e-49, 0.801, 0.666
NZ_NAYY01000001.1	padloc	PD-Lambda-1	29498	30742	4.599999999999998e-131	-	.	Name=PD-Lambda-1;HMM.accession=PD-Lambda-1_WP_005960421.1;HMM.name=PD-Lambda-1_WP_005960421.1;Target.coverage=0.93;HMM.coverage=0.784;Alt=PD-Lambda-1_WP_005960421.1, PD-Lambda-1_WP_005960421.1, 4.6e-131, 0.93, 0.784 | PD-Lambda-1_WP_082363513.1, PD-Lambda-1_WP_082363513.1, 1e-116, 0.957, 0.802
NZ_NAYY01000012.1	padloc	SEFIR	11063	12031	9.799999999999999e-35	-	.	Name=bSEFIR;HMM.accession=SEFIR__bSEFIR;HMM.name=SEFIR__bSEFIR;Target.coverage=0.789;HMM.coverage=0.701;Alt=SEFIR__bSEFIR, SEFIR__bSEFIR, 9.8e-35, 0.789, 0.701
NZ_NAYY01000022.1	padloc	RosmerTA	24144	25310	4.099999999999999e-150	-	.	Name=RmrA;HMM.accession=RosmerTA__RmrA_2603008502;HMM.name=RosmerTA__RmrA_2603008502;Target.coverage=0.987;HMM.coverage=0.992;Alt=RosmerTA__RmrA_2603008502, RosmerTA__RmrA_2603008502, 4.1e-150, 0.987, 0.992 | RosmerTA__RmrA_2664250653, RosmerTA__RmrA_2664250653, 4.6e-62, 0.928, 0.906 | RosmerTA__RmrA_2600853143, RosmerTA__RmrA_2600853143, 7.7e-62, 0.884, 0.875 | RosmerTA__RmrA_2623274509, RosmerTA__RmrA_2623274509, 9.9e-62, 0.948, 0.932 | RosmerTA__RmrA_2677172838, RosmerTA__RmrA_2677172838, 1.3e-59, 0.928, 0.937
NZ_NAYY01000022.1	padloc	RosmerTA	25331	26038	1.6e-64	-	.	Name=RmrT;HMM.accession=RosmerTA__RmrT_2603008502;HMM.name=RosmerTA__RmrT_2603008502;Target.coverage=0.983;HMM.coverage=0.972;Alt=RosmerTA__RmrT_2603008502, RosmerTA__RmrT_2603008502, 1.6e-64, 0.983, 0.972
NZ_NAYY01000028.1	padloc	PD-T4-6	18423	20378	1.2999999999999995e-104	-	.	Name=PD-T4-6;HMM.accession=PD-T4-6_WP_011718859.1;HMM.name=PD-T4-6_WP_011718859.1;Target.coverage=0.796;HMM.coverage=0.934;Alt=PD-T4-6_WP_144078097.1, PD-T4-6_WP_144078097.1, 1.4e-178, 0.525, 0.972 | PD-T4-6_WP_139553373.1, PD-T4-6_WP_139553373.1, 1.2e-148, 0.475, 0.945 | PD-T4-6_WP_203635815.1, PD-T4-6_WP_203635815.1, 3.7e-121, 0.693, 0.963 | PD-T4-6_WP_160801532.1, PD-T4-6_WP_160801532.1, 5.9e-112, 0.621, 0.828 | PD-T4-6_WP_011718859.1, PD-T4-6_WP_011718859.1, 1.3e-104, 0.796, 0.934
NZ_NAYY01000013.1	padloc	PDC-S04	21953	22564	2.1e-46	-	.	Name=PDC-S04;HMM.accession=PDLC04838;HMM.name=PDC-S04_WP_169250289.1;Target.coverage=0.931;HMM.coverage=0.909;Alt=PDLC04838, PDC-S04_WP_169250289.1, 2.1e-46, 0.931, 0.909 | PDLC04839, PDC-S04_WP_034227615.1, 2.2e-30, 0.882, 0.902 | PDLC04842, PDC-S04_WP_163235784.1, 1.4e-16, 0.621, 0.594 | PDLC04841, PDC-S04_WP_121941008.1, 5.6e-13, 0.483, 0.301 | PDLC04840, PDC-S04_WP_201691753.1, 4.1e-07, 0.67, 0.595
NZ_NAYY01000029.1	padloc	PDC-S22	5726	6574	3.8999999999999985e-130	+	.	Name=PDC-S22;HMM.accession=PDLC04962;HMM.name=PDC-S22_WP_003530377.1;Target.coverage=0.972;HMM.coverage=0.972;Alt=PDLC04962, PDC-S22_WP_003530377.1, 3.9e-130, 0.972, 0.972
NZ_NAYY01000031.1	padloc	PDC-S19	70508	71473	1.0999999999999996e-148	+	.	Name=PDC-S19;HMM.accession=PDLC04952;HMM.name=PDC-S19_WP_106843225.1;Target.coverage=0.994;HMM.coverage=0.985;Alt=PDLC04952, PDC-S19_WP_106843225.1, 1.1e-148, 0.994, 0.985 | PDLC04949, PDC-S19_WP_218140341.1, 9.9e-117, 0.984, 0.964 | PDLC04953, PDC-S19_WP_220621526.1, 7.3e-28, 0.944, 0.922 | PDLC04955, PDC-S19_WP_066067885.1, 6.8e-21, 0.941, 0.95 | PDLC04950, PDC-S19_WP_052739558.1, 2.5e-20, 0.95, 0.926