Array 1 145739-145104 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEWW01000001.1 Ignatzschineria cameli strain UAE-HKU57 NODE_1_length_778452_cov_258.909053, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 145738 28 96.4 32 A........................... CTAAGCGGTGTAAGGATTAATGATTTAAAAGA 145678 28 96.4 32 A........................... TGTATCTACAATTGCGCATCTCTTTAAAGCAT 145618 28 100.0 32 ............................ TTATTTTTAGCGCCACCCATCACCCCAACTCT 145558 28 100.0 32 ............................ TTGGAAGTTAAAATCCCCGCTTTCAGACTGAA 145498 28 100.0 32 ............................ TATTATCGCCGCTCCCAATACAGGGAGAAGCT 145438 28 100.0 32 ............................ TGTTTCTTGACTGTGAATCTATTGTAGCTAAT 145378 28 100.0 32 ............................ TTGAGCGCCCACTCTAAATGTAACAATCTCTT 145318 28 100.0 32 ............................ TGAAGGAGACTCAACATCATCAAAGCCGGCTT 145258 28 100.0 32 ............................ AAATTTGAACGATTTAACTTTTTAGGTAGTTA 145198 28 96.4 39 .........................G.. TATTTTCCTCTGGAAGGAACTATTCACTATTCAATTGCT 145131 27 71.4 0 A.....C...AC...A.TG....-.... | G [145105] ========== ====== ====== ====== ============================ ======================================= ================== 11 28 96.4 33 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TCTCTTCAGGACAGCCAATCATCACCCATATTGCCTTAAAGCCAACCTCAAGCTTACGTCTCGAAGGTCGCACTGTCGATACTGAGGGAAATGAGACTTCGGTCATTACCAAAGGTCGACACGATCCTTGTGTTGGAATCCGTGCAACACCCATTGCTGAAGCAATGTTAGCGATCACTCTACTCGATCATGCCCTTCGCCATCGCGGACAAACAGGAAGATAATACTCTTCTTAAAATCACTTGATGGACAATTGAAAATCAATTAGGCTTCAATAGAAGCAGATATTCATTCACCATCTAAAAAAAATTATAAAAGTAACTATACAAAAAAGGATTAATCTGCTTATCGCTTACTCATCCTTTTTTAACCTTTATTTTAAGCTCTTTAAAAAATTAAACTAAAATCAATGAGTTAGATAAAAGAGGAAAATAATAGGTTTTAAGGAGCAAACAACCCTAAACTTCGATTTTTCCTCTCTTTTAACGTTTTAACTCACT # Right flank : TATTAGATAATCAAGTAGGATTAATTAATTTCAAATAGATAAATTTCAAATAGATAAACTTCTCTATAAAAATAAAAAAGATCCTAAAATCAATCTCTAATAGATCTCTAATATAGTATTAATGCCCTAATAATCATAAGGCTGATAGAATCGGGATATTGACCTCATGAGTTCATTACTCTAAGGTGAAAGAGATAATATTATAGGGATAGAGAGAAATGATCAGAAACTTCAAGATTCGCAGCCTCTTTTTAATGCTTCTTCTACTCTTTTCGATGGGACTTTCCCCTTTAATGGCGGAAGATACACCGATCGAAGAGCGTACCGAAAAACTCAATGATATTGAATTAAAACTTGAGGATATTCTTGCAAGAAAGAAATCCCTTCAAAGTCAGCTCAAAGATAAAGCGCTCTCGGAAGAGGAGGTCGCTGATCTTAACCAACGACTACAGACTCTTTTGCATCAACAGAAAGAATTTAATGCCCTCTTTGAACAGACA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 358371-362657 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEWW01000001.1 Ignatzschineria cameli strain UAE-HKU57 NODE_1_length_778452_cov_258.909053, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 358371 28 100.0 32 ............................ TTTATGGGAGCGCGTGGGAATAAATTCGTAAA 358431 28 100.0 32 ............................ CGTACATGCGCCAAGTACCCCCACGCCATGTA 358491 28 100.0 32 ............................ GCTCGGTGAATTTAAGATCGTGGCGCTCAATT 358551 28 100.0 32 ............................ CAGCGCTCTCCCTCGGATTCAGAGCATCTGTA 358611 28 100.0 32 ............................ TTATGCCCCCCTGCGGTGGTAGCTTACTTTTT 358671 28 100.0 32 ............................ TACGGTTGGAAAGGATCTGCTTCTAACCATAA 358731 28 100.0 32 ............................ CTCGCCGGTGGGCAGAGGGCATGGCTAAAACC 358791 28 100.0 32 ............................ TTATCAGGCTTAACAGGCAATGATTACAACGT 358851 28 100.0 32 ............................ CCCCATTAATCCTACCTTTTTTTATCTCTCTA 358911 28 100.0 32 ............................ CGAAGCAACAGTTAACGGCCAAAAAGTCGTGT 358971 28 100.0 32 ............................ CTGAGATGTGGGTTTGATTCCCACCAGGCTAA 359031 28 100.0 32 ............................ TACTGTCTAGCGTGCTTACATGCTGTTTTGCA 359091 28 100.0 32 ............................ GGACAGATCGATAGCAGATACGATCGCATTTA 359151 28 100.0 32 ............................ GCTACTCTGAATTGCGTTAACTGTTTCAGTTG 359211 28 100.0 32 ............................ GGACAGATCGATAGCAGATACGATCGCATTTA 359271 28 100.0 32 ............................ ACCGCCTTGTGGGCGCATATGATATTGATTAA 359331 28 100.0 32 ............................ AAACGAGAAACCGCAAACGTGAGCTACGCTTG 359391 28 100.0 32 ............................ GAATCTTGCTCGACATCCCTGCATTGTCTTGC 359451 28 100.0 32 ............................ GCTCGTCGATGGTAAACCCCTTTATCCAGGAT 359511 28 100.0 32 ............................ AATAACGAGTACAATAGGATTCGCCAGAACAG 359571 28 100.0 32 ............................ AATCACTAATGCATCAAGGTTTGCATAATCAC 359631 28 100.0 32 ............................ GATTGGCTCGCTCGAGCAATTGTGGATTACCC 359691 28 100.0 32 ............................ GCCGCTGCAATCTGGTACAGAGATAACGCCGG 359751 28 100.0 32 ............................ TAGATAGCTGCAAAAGAGATCTGCCGGAAAAT 359811 28 100.0 32 ............................ GCAATGTCCTTCAGCGTTAAAACCCGTGATGC 359871 28 96.4 32 ..........A................. TCAATACGATTCATATCGCTTGCGCCGGGAAG 359931 28 100.0 32 ............................ ACCCAGATGGCAATCCCTATCTCTCAACTGCT 359991 28 100.0 32 ............................ ATGGTTTGTGGTTTGGTCTTTTGGTATGGTAC 360051 28 100.0 32 ............................ CATGGTTGCCACGTCGGGCATAGTTGTGGGCA 360111 28 100.0 32 ............................ TCGAGAGCATCATAATACTGCCTCTCGCTTAT 360171 28 96.4 32 .............T.............. TTGATGCTCTCTGACTTAGCTTGGTGATCTGT 360231 28 96.4 32 .............T.............. GATTTGAAAAAGGTTTTAATAGAAAGAGATAA 360291 28 96.4 32 .............T.............. TTTAACGAAAGCCTCTGGACGGTAGACTGCAA 360351 28 96.4 32 .............T.............. CTTTACCCCTTAGACGCTCGGCGCTTGCCAGA 360411 28 96.4 32 .............T.............. TTTTTGTGCAGCTGCTTCTGCGCTCTTAATAA 360471 28 92.9 32 ............GT.............. AAATCGATTGCGGATATGCTCCATAGGTGAGC 360531 28 96.4 32 .............T.............. TATTTCATACACGAGAACTATAAATAGAGGTG 360591 28 96.4 32 .............T.............. GCAACTGTCTTCCCGCCGATCTGCTGCAAAGA 360651 28 96.4 32 .............T.............. TTGATGCTCTCTGACTTAGCTTGGTGATCTGT 360711 28 96.4 32 .............T.............. TTAAGGTAGGCCAGAAAACCTCTTATAGTATC 360771 28 96.4 32 .............T.............. GGTGCATCTTTCGCTATCAACATATAACGAAT 360831 28 96.4 32 .............T.............. TAAAGCTGATGAGATCTGGATAGTGGAAGGAA 360891 28 96.4 32 .............T.............. TCTTCGCTTTCGAAGATTGTGCGTAATCTATG 360951 28 96.4 32 .............T.............. TATCCTATGTTAGAAGCAATCAAAGCGGAGCT 361011 28 96.4 32 .............T.............. TTGCAAAGCTTCGAGAAGATACACAGAAAGAG 361071 28 96.4 32 .............T.............. TGCTGAAGCTCCTTCAAAAGTTGTTTTACCTG 361131 28 96.4 32 .............T.............. TGAGATTTCATGAAGAGCCGGAAGAGTATGAA 361191 28 96.4 32 .............T.............. AACGAAAGATTATCCCTTCTATCGCGTGCTTG 361251 28 100.0 32 ............................ CATTCATTGTCTGATAGCTTCAGCATCAATTG 361311 28 100.0 32 ............................ CATGGTTGCCACGTCGGGCATAGTTGTGGGCA 361371 28 100.0 32 ............................ AACGCTTGATGACTTGGTGTGTGGGTAATGCG 361431 28 100.0 32 ............................ TTCGCCGTCAACCAATACAGATACCTGGCTAC 361491 28 100.0 32 ............................ GTACGGGCTTAAATTTAGCCAATCATTTGAGC 361551 28 100.0 32 ............................ TAATAGCAATCAATTCTTATCTCCTCTCGATC 361611 28 100.0 32 ............................ AACGCTTGATGACTTGGTGTGTGGGTAATGCG 361671 28 100.0 32 ............................ TTCGCCGTCAACCAATATAGATACCTGGCTAC 361731 28 100.0 32 ............................ ATGTGAACCACAGCTCGCTGTCGGCCTTTCTG 361791 28 100.0 32 ............................ ACCATTCATTAGATACAATCGTTACCGTATAA 361851 28 100.0 32 ............................ TAACTAATATCGAGAAGATCGAAGGCGGTAGT 361911 28 100.0 32 ............................ TCATCGAATGACTTAATAAAATCTATCCCATC 361971 28 100.0 32 ............................ AAACTTTCCTGAGCCGGCAACTCTCGGCGATA 362031 28 100.0 32 ............................ ACGTACGCCGGCGCAACCGAGCGATGGCCGCC 362091 28 100.0 32 ............................ CACGTATCACAAGAGAAGACATCTTCATTGCC 362151 28 96.4 32 .............T.............. AAAAGAAAGTTAAGAATTGATACAGCAGAATC 362211 28 96.4 32 .............T.............. AATCAGATCGGCAATTTAACCGCAGCGGTCAA 362271 28 96.4 32 .............T.............. TTGATCACCTTCAATAAGCCCTTTCACCCAAG 362331 28 100.0 32 ............................ TTGCGGATAAAACTTCCGCGGTTGTAGAAGAG 362391 28 100.0 32 ............................ ATATTAGGGTCGGCTAACTTCAATATAAATTT 362451 28 100.0 32 ............................ TATTATCTTTCTCACTACTAAAGAGTCTCCAA 362511 28 96.4 32 ..................A......... AATTCCTGATTCTGTAGCTGTAGAGCGTTGAC 362571 28 85.7 32 ...CG.T...........A......... TTTGGCGGGTAGGGCTTTTCGCCTTTCCCTTC 362631 27 71.4 0 ...CG.T.T.........A.T...-..G | ========== ====== ====== ====== ============================ ================================ ================== 72 28 98.2 32 GTTAACCGCCGCACAGGCGGCTTAGAAA # Left flank : ATTCGTGATTATGCTTTAGTAACTTCCATAAAAAGAGTTCCAGATGAGGTGGATGATTATGTCATTTTTTCAAGATGGAGACCCCAATCAATTAGTAAAAGCCAAGTGAGACGTTATCAAAAGCGTCATCCTGAAAAGTGGAGTGATGCTGTTTGTGAATATGTTTTAACTGAGCGTTCTTTACCTTTTGGCATTCCGCACTTTAAAGTGAAAAGTGGAAGTACAGGACAGACTTTTACAATTTGGGTAAAACGACACTCTTGGGATAAGCGCAATCAACGTCATGGAGTATTCGATAGTTATGGCTTGAGTAAAACTGCTGCTGTTCCTATTTTTTAAAAAAGAATGCACCTTTCTGATTAGATAATAACCCTAATTTTTCGTTAAGATGTAACTTATTGATTTTTAATCATGAAAAGTAATCTAGAAAAATTAGGGTTTTTTTATCCCTGTTCTTTAACAATTTGGATATAATGAGCGTTCTAGAAGATTTATCTCTA # Right flank : GTTTCGGCGGAAAAGGAGTCCGTCGATGCTTTGGTACAGTAGCATTTGGGGCAAGTAGATAGAAAAAAGGCCGTTAATATAACGGCCTTCTTTTTAGGTTTAATCTGATATTTTTTATCAGAGATCAAGTCTTAATCAGCAATTAAATGATTAATGCTTGATTAGAATGGAGCGTCGATATCGACAACATCAACGAGTTTGATATTAACGAACTCTTTAAGACCTAAGTCGATCAATTCACGACCATATCCTGAACGGCGGATACCACCGAATGGGAGATCTGCTTTAACCATGGTTGGGTGGTTAACAAATACCATTCCTGTTGAGATTTGGTTTGCAACACGACGGCCACGCTCATTATCTGAAGTGAATACTGATCCACCTAAACCAAATGGTGAGTCATTAGCAATGCGAATCGCATCAGCTTCATCTTCTGCTTTAATGATCATCGATACAGGACCGAAGAACTCTTGGTAGTATGCTGGGTTATCAGGCGTTAC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCGCCGCACAGGCGGCTTAGAAA # Alternate repeat : GTTAACCGCCGCATAGGCGGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //