Array 1 181201-185047 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNWH01000002.1 Halomonas ventosae strain 1_TX Ga0227259_102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 181201 33 100.0 34 ................................. ATATATCAGAACGCGAGTTGATGGAAGGCACTAC 181268 33 100.0 34 ................................. AAGGAGGCGCCGCCCGTGAGGGCCGCGTGACCGA 181335 33 100.0 35 ................................. CCGCAGTTGTGGTGATAGACGCCTGCTGCCCGGTA 181403 33 100.0 36 ................................. ACCTTCGCCTTGATGTTGTCCATCAGGCCGGTGCCG 181472 33 100.0 36 ................................. GCCGCTGAGGATGATCACGGCAAGGCAGACTTTTAC 181541 33 100.0 36 ................................. GCCGAGCACCGCCGGGCGATGCGCTCCCCGCTGACC 181610 33 100.0 33 ................................. CGCTTCGACCCGGCATGTGACTGGCGCCGCCCG 181676 33 100.0 35 ................................. CTAAAACCCAGTTCAAAGAGACCGTCAACCACATC 181744 33 100.0 35 ................................. GCCTTTGGTCTAAGCCGCCATCGGCACCAGGGCAG 181812 33 100.0 34 ................................. ACCTCAACGCCAACGATGGAGGCGCCTGATGCCA 181879 33 100.0 37 ................................. GCGTCACGGGCTGCCGTGATGCCGAGACTCAGGTCAA 181949 33 100.0 36 ................................. GGTACAAGTCAGGCGCGTGGCGGATTGGTGAGTACC 182018 33 100.0 35 ................................. TCGGCTTCGGTCTCGTACTCTTGCAGCCGGCGCTT 182086 33 100.0 36 ................................. AGCTCCTGCCACTCGTCGGTAGAGGTGTCGCCGATG 182155 33 100.0 36 ................................. GAGCGCGAGGCAGGCTTCGCGGTGCAGGCCATCCAG 182224 33 100.0 34 ................................. CAGGCGCTCGAGCGGTCGCGGATGGCGTTGACCT 182291 33 100.0 35 ................................. TGGCCGAGAACTTGAGCGACTTCTGGATCTCGCGG 182359 33 100.0 35 ................................. GTGAGCTACTGGCCCGGCATGCCGCTGTTCGTCAA 182427 33 100.0 33 ................................. ACCACCGAGCTGGACGGCCGGCTGAACCTGCAC 182493 33 100.0 35 ................................. GGGTCGTGCTCCATGATCGACATCCAGCAGCCCGG 182561 33 100.0 36 ................................. TCGGAGACCTGGCCGAACTGGGGTATGACGCGGAAT 182630 33 100.0 35 ................................. CGACGCCAAGGGCTCAGGAGCCGGGATCGACATCG 182698 33 100.0 34 ................................. CTGCCACGCTGCGCAGGTGCTCGATGGCGTACTG 182765 33 100.0 34 ................................. GGGCGCACCGCTGCTGGTCTCAACGCCACCGGCG 182832 33 100.0 35 ................................. GCCTTCGTCTACGAGGTGGCCTCTTGGGCGAAACC 182900 33 100.0 36 ................................. GCTACGTCCTCGAATGTTTACGCCGGCCTCCAGGAG 182969 33 100.0 36 ................................. GGCTACTCCAGCGACGGACTGGTCAGCGACGAGGGT 183038 33 100.0 34 ................................. ATCGCCTGGCTCATGCGCTGGGCGACCTGGTGCG 183105 33 100.0 34 ................................. GGTGACGGCACCGGCTCAAGCAGCGCGGCCTCGG 183172 33 100.0 35 ................................. AAGGGCAAGGGGCCCCGCAAGCTGGCGCTGGCCAT 183240 33 100.0 34 ................................. AGCGTCACCGGCAACGTACCCATGCCAGGCTCGG 183307 33 100.0 36 ................................. ACCAGCTCCTCGGCGATGGCCTTGGCGCTGTCGCGC 183376 33 100.0 34 ................................. CTGATGAACCTGGAGTGGTCCGACGTTGCCGAGA 183443 33 100.0 36 ................................. CAGTCCGGAATTGCGCAAGGAGGCCATCGAGCAAGG 183512 33 100.0 36 ................................. AGGTCTTGCGAATCATCTTCCATCACCGGTCTCCTG 183581 33 100.0 36 ................................. CGCGAGGTGTGGCGCGTGCTGCGCGACGACGGGACG 183650 33 100.0 32 ................................. GCCAGCATCGATCATGACGCCGCCATGGCCAG 183715 33 100.0 36 ................................. GACCAGGCGGCAAGGGATCTCGCCGATGAGCTGATC 183784 33 100.0 34 ................................. TCAAGCCCAGCCAGACGCTTACCGCCAGCATATA 183851 33 100.0 35 ................................. CCACGGTGGACGGCATGACCGACAAGACGCCAGAG 183919 33 100.0 34 ................................. ACCACGGCGGAAGGCGGCAACGTAAAGCCCGAGG 183986 33 100.0 36 ................................. TCCTTGACGTAGTCGGTGAACTGGTTGAAGCCCCGG 184055 33 100.0 35 ................................. GAGGCGTCGGTTCCAGAAGTTGTCGTTGCCCCAGA 184123 33 100.0 37 ................................. GCCCTCTCTTGAGCCCGTCGTTGCTGACGCCGTTCAC 184193 33 100.0 37 ................................. ACTGCGATCCCCTGCAAGCCCGAGAGCCTGAAAACCC 184263 33 100.0 36 ................................. GCCCGGGTGGTGGTGGCGGTGAGCACGTCGGCGACG 184332 33 100.0 36 ................................. GTCATCACCAGCGCCGTGGGTGGTGACGACTCCATC 184401 33 100.0 35 ................................. CGCCTGTGGCACTACGACATGTGGCTGGCCATCCA 184469 33 100.0 36 ................................. CAGCTGGACCGCCATCGAGATTAACGCCGAGCGAGT 184538 33 100.0 35 ................................. CGACCTGGGGAACCTCGACATCCATCTCGACGGTG 184606 33 100.0 35 ................................. TCCTGCTCCTTTGCATTAAAAATGCCAGCACTAGG 184674 33 90.9 36 ......C.....C....G............... ATCGAGGAGCAAGCACATGGACCAGATTGAAAGCAT 184743 33 90.9 34 ......C.....C....G............... ACCTTCGGCCACCGCATCACCAAACAACAGGAGG 184810 33 97.0 36 ......C.......................... TGGAATGACCTGGATGGCTCCGTCGAGGTCAACTAC 184879 33 100.0 34 ................................. ACCCAGAGGCTCGTATGCTCGTTGATCTGCTCGA 184946 33 100.0 36 ................................. ATTTATATGACAATTGCATTAGCTTTAATTGATAAA 185015 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 57 33 99.6 35 GTCGCGGCCCGCACGGGCCGCGCGGATAGAAAC # Left flank : TTGACGTTTCCGCGCGAACCGCGTTGCTGCGCCAAATGGCGCCAGGCCGGGCGGCGTTCCGCAAGGCGCGGGATGCAGGGAAGGGTGGTTCCCTTGTCAAATCCCGCAACGCCGCATGGCGCCATTTGCCGCGCAACCCAAAGGGCCGGGCCCGTTTTTGCACGGTGCGGCGTTATTCGTCGTTCATTTGAAATAACCAAACTACTCTCCTCATGCCTTGCCCCGCACAAAAACGGGCTCCGGCGCGGCCGTGCAGGAAACGTCAACAGGCCCTAATCATCGTATCCGGCCAACCACTTAATCCGGATTACCTAGATTTTTCCTCTGCGAACCACAAGTGTTCCGCTCTTTCCCCCCAGGTTCGCAACTCTTTAACAATCTATTTTAAAAGCCACTTTTTCATAAGATGGCGATGGCATTGTCGTAATGATCGATTCCAGGAAGGGGTTCGCTTTGCTCGCGTTATTTGCTTAACTGAATCAAAGCGTTATAAAGGAACA # Right flank : CTACTGTCGAGCAGCGCATCCGCTGGAACTACAACCTGTCGCGGCCCGCACGGGCCGCGCGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGGCCCGCACGGGCCGCGCGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 185904-187771 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNWH01000002.1 Halomonas ventosae strain 1_TX Ga0227259_102, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 185904 33 100.0 38 ................................. GCTGAACATGACCATTGGCGAACTGCGCGATTTTGCGG 185975 33 100.0 37 ................................. AGATAGTGCCGCTGCGGCTGCGTGTCGCTCATAGCCT 186045 33 100.0 35 ................................. GTCGAGCGCTACAAGGATCACGACAACAAGCATGT 186113 33 100.0 36 ................................. ATGCGTCCAGCGATGTCGTCCTCGGTTCCCTCAAGC 186182 33 100.0 34 ................................. ATGACCGCCGCCGACGCCTACGGGGCGGACAGCG 186249 33 100.0 35 ................................. AGCGACCAGCACCGCTTGGACGGCACCATCACCCC 186317 33 100.0 34 ................................. GATAGTCGGGCCGTCGCGGTCGACACGGTCGCGC 186384 33 100.0 35 ................................. CTGGTTGATGTCCGGCTCAAGCAGGTGAATCACGC 186452 33 100.0 34 ................................. TAGCGCGCCCGATGCCGCGCGACAGCTGCTGAGG 186519 33 100.0 34 ................................. CGCGACGGCGCTGCGGCGAAGATCGACTTCACCC 186586 33 100.0 34 ................................. GGGCCTAATATCCTGACCGCTGGCAAGGCGCTGC 186653 33 100.0 33 ................................. TAAATCGCAGGATCGTAAGTGCTCATCGTACGG 186719 33 100.0 36 ................................. GGCATCGCCGTAGAATTCGCGCCACCGCTCTTCCAG 186788 33 100.0 36 ................................. ACCGCAAGGATCGCGTCTATCTAACGACTAGCTATA 186857 33 100.0 36 ................................. CTCGTCGGCGGGGTCGAAAAGAGCCACATCATGGTG 186926 33 100.0 34 ................................. ACTAGCTTGGACAAAAACCTTGATGGCTTGCTAA 186993 33 100.0 34 ................................. TTACCCATCCCATCCCCCTACGTATAGTTATCGC 187060 33 100.0 35 ................................. CTCAAGCCCGTTGAATACCTGAATAACGCCGGTAG 187128 33 100.0 34 ................................. CTGCTCGCGGTCGGACTCGATGAGCACCACCGGC 187195 33 100.0 34 ................................. CACATACCAAACGTCATCCTGTCCCTCAGTTCCT 187262 33 90.9 34 ......C.....C....G............... GTCTTTATCAAACAAATCGGGATACTCTGACAGT 187329 33 90.9 37 ......C.....C....G............... ACGTCTCCACCTCCAGGTCGCCATCGGACTCCTTCTC 187399 33 90.9 36 ......C.....C....G............... TATAATATGCCCAGCAAGAAAGGTTACGTATTGGGG 187468 33 90.9 34 ......C.....C....G............... ATACTCATCAACAAGTTCGGCGATGCGATCATCA 187535 33 90.9 35 ......C.....C....G............... CCTGTAAACCTATCGCGATCACCTTGCCAGCGTGT 187603 33 90.9 36 ......C.....C....G............... TCGACGCTGCGCCCGGCAATGTAGCCGCCGACGCCC 187672 33 90.9 34 ......C.....C....G............... CACCAGGCTGCCTCGAACTTGCGGAAGTGCTCTT 187739 33 90.9 0 ......C.....C....G............... | ========== ====== ====== ====== ================================= ====================================== ================== 28 33 97.4 35 GTCGCGGCCCGCACGGGCCGCGCGGATAGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCCCGCACGGGCCGCGCGGATAGAAACAATGGCCCCGCCATAGGTCTGGGCGATGGTCTC # Right flank : CTACCGCTGGAGGGCCCGGCGGCGAGCCACCGCATAACGTCGCGCCCCCGGCCTGCCTTGCAATGCTGGGCGCCGGCGATGACGTCGTGGTGTTCGCCTGGTCGATCATCGGCGCTTCACCGCCGGTCGGCGACGGTCTGCATGTGTTGACCCGGACGCCGACATCAATGGGGTTGTCGAAGGTCTTCAAGCGGTGCGTGCGTCCTGTGCCTGCCGGCGCGCAGCGGCATAGACGCAGCAGCCGGCAATTACCGCGAACACCACGCACACCCCCATCACTGCGCCCCAACCCAGCCACTCGTATAGCGATACCATCGCGCTCGAGCCCAGCGTGCCGCCGGCGAACACCGCGGCCACGAACAGCGCGCTGACCGTTCCCGACTGCGAGCGCGCGAAGTACTCATTGAGCAGCACAATCTGGGTTGCCTGCTGAAAGACCATGCCACCGCACAGCACTACCACACCGGCCACGAGCGCGACCAGCGATCCCTGGATGATGC # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGGCCCGCACGGGCCGCGCGGATAGAAAC # Alternate repeat : GTCGCGCCCCGCCCGGGGCGCGCGGATAGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //