Array 1 224206-223279 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJXJ01000001.1 Tenacibaculum sp. M341 M341_contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================= ==================================================================================== ================== 224205 45 86.7 30 .CGC....GA.C................................. GCACGAACAAAGTTATCAATACTTATAGCA A,C [224185,224195] 224128 45 100.0 30 ............................................. TTTATCTAAAGAAAGTAAACTTAGAATTGA 224053 45 100.0 30 ............................................. TTTATCTAAAGAAAGTAAACTTAGAATTGA 223978 45 100.0 30 ............................................. CCTGACCATTATGTGCTATTTTATACAGAT 223903 45 100.0 30 ............................................. TAATGATTCAAACAGTATTGCAGGTAAGGT 223828 45 100.0 30 ............................................. TTTATCTAAAGAAAGTAAACTTAGAATTGA 223753 45 100.0 30 ............................................. CCATGCTTCATGATATTTGAGTAGGAAGCT 223678 45 97.8 84 .....................A....................... ATAACGAACAAACAATCTGTTTGACTCTAGTTGTGAATTGATTTATTCACTTATTTGTTATTTTACATTTAAGTGTTCATGAAG 223549 45 77.8 30 CGCTAA.GGC.C................................. AGATAAGAAATTCAAAAGAATTGAAACTTG G [223532] 223473 45 100.0 30 ............................................. TTTGCTTTACATTTCATACATCGACCACAC 223398 45 100.0 30 ............................................. AACTATAAAAATAAATGAATATACAAGTTT 223323 45 100.0 0 ............................................. | ========== ====== ====== ====== ============================================= ==================================================================================== ================== 12 45 96.9 35 GTTGTGAATTGATTTCAAATTGTATCTTTAGTGAGCATTCACAAG # Left flank : AATCAAAAATCCTAATATTGAAGAGCTTAATGAAATTATTTTTGCTATGATTGATGGTGGTTATTTTTATTTAGGTACTCAAATGCGTAATGAAACCTCTTACCAACAACAATCAAGTATATATATTAAACATGTGTTAAGTCTGTTTCATTTTTCTTAACCTTTTAGTTATACTCTTAAATTTTTAAACACTGTAAAAATGGCTATCAATCCCCAAATGGTATTTACTACAATGGTAGGATTGTCTTTTATAGCCACAGCATTAATAACCAAACACAAAGCGCCTAAAAAGTTTAACCAATGGTAAGTAGGTTTTTCTGCTTTTAATTTACCTAAACTCAGTAATAAATACGATACCACAAAAAGTAACACGCCTAACCAACCTATAATGGTGAAGTAATTCATAATAGTAGTTTCTAAAAAGTGGTAAGTTACTAATCATTGTTTGTTATTGTATAATCACTTGTTTTTTTGTTATTTTACATGTAAATGTTCATTTA # Right flank : GTAAATCTTATAAAACCTCCATATTTACTGGAGGTTTTAAGTTTTATAGAATTTAAAAATTAGAACAATTCAAGTTGCTGAACTGGCTTTTTAATCAAAAAAAACTTACTGAATACGTCTAAAAGTTACTTTTTATAAAAACGTACATAAAACATGATCTCAACTCCACTCAAACTAACACTTAGAGGTGCCTTTTTGAGTTTTTTAAGTACTTAGAGTTTGATTAATAAAAAAGTCCACATAAAATGTGAACTTTTAAATAAGGTTTAGTACTCTCCTACTGTTACTATATTTCCTAAATGATTTAATCTTACTTTTATAATATTTTTCAAGTTTTTTGGGGAGGTAATTCTTCTATAGGTAAAATCTATATTATTTGTTACAGTTGTTTCTAAATGATGTCTAAACCAATAATCTTTAGAAGATGTTTTCTGTACCCTAAACAAATAATTACTTAACAATGTTGCATTTTTATCATTTAATAAATCAATATTTTCTAA # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.35, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGATTTCAAATTGTATCTTTAGTGAGCATTCACAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 428046-427880 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJXJ01000001.1 Tenacibaculum sp. M341 M341_contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ================================ ================== 428045 34 100.0 32 .................................. GCACACCATAAGCAAACATAGGTAAACATAAG 427979 34 97.1 32 ...............A.................. ACTGCTTGAGTTGTTGGCTATCCATACCTGAT 427913 34 97.1 0 .....................G............ | ========== ====== ====== ====== ================================== ================================ ================== 3 34 98.1 32 GTTGTGACTTACATCTGTTTGTAATGTATTCACA # Left flank : ATTCACAGCATAATCAATTAGGAATTGTCAATTATGAATTACGAATAAAACACGTCTTTGCGAGCGGAACGTAGTTAAGCGAAGCAATCTGCTTATTGTTAGATGTAAATAATATTTTTAACTAGCAATAAACAGACTACTTCGTGCCTCGTAGTGACGATAAATTTTTAGTTGTCTGCGATCAATAAACAATGATCAACTTTGATAACTGTTAACCGATAATTGTTAATTGTAATAGTTGTGACTTATATCGTTTGTAATGTATTCGCAGCATGATCAATTAGGAATTGTCAATTATGAATTACTAATAAAACACGTCTTTGCGAGCGGAACGCAGTAAAGCGAAGCAATCTGTTTATTGTTAGATGTAAATAATATTTTTAACTAGCAATAAACAGACTACTTCGTGCCTCGTAGTGACAATAAATTTTCAGTTGTCAGTGATCTATAAACAATGATCAATTTTGATAACTGTTTACCGATAATTGTTAATTGTAATA # Right flank : GCATAATCAATTAGGAATTGTTAATTATTAATTACGAATAAAACACATCTTTACGAGCGGAACATAGTTAAGCGAAGTAATCTGCTTATTGTTAGATGTGAACAATATTTTTAACTAGCAATAAACAGACTACTTCGTGCCTCGTAGTGACAATAAATTTTCAGTTGTCAGTGATCTATAAACAATGATCAATTTTGATAACTGTTTACCGATAATTGTTAATTGTAATAGTTGTGACTTACATCTGTTTGGAATGTATTCACAGCATAAAATTTGATCGTTTGTCGTCATATGTTGTTGTGACTTACATCTGTTTGAAATGTATTCACAGCTTATTCAGTTATCAGGGATCAATAAATAATGATCAATTTTTGATAACTGTTAACCGATAATTGTTAATTGTAATAGTTGTGACTTACACCTGTTTGGAATGTATTCACAGCATAATCAATTAGGAATTGTCAATTATGAATTACTAATAAAACACGTCTTTGCGAGCG # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGACTTACATCTGTTTGTAATGTATTCACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 429450-429282 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJXJ01000001.1 Tenacibaculum sp. M341 M341_contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 429449 36 100.0 30 .................................... GAGTATGATGTTTTCTTGACTTACAAACTG 429383 36 100.0 30 .................................... TCTAATTTAAATTCGATAAATTTCTTTGAT 429317 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GTTGTGACTTACATCTGTTTGGAATGTATTTACAGC # Left flank : ATTAGCTTTCCTGTAAAACGATTAAAAAGTCATGATTTTTATACCATGAACAGAATTAAATCAATTGTAGGTCGATTAAAAAAAGAACATCCAACTAAAGACACATATACCTATCAAGAAATAAAAACCGCCATGCAACAGCATTGGAAAGAGAGTATTGAATTTGTTTCACGATTATTGACCTTTGAAAAAAACTATAAAAAAGAGTTTACTAATAAAAATGATATTTCACTTGCCAACATGGGATATGTTAGTTTTGAAGATTTTAAAAACGAACTAGGTAATAATTTTAGCACTTTAAAAGAAATACGCAACAAAGCTTTACATGCTGATATTTTACCCCCAAATAAATCATATAAAGAGTTAATTAAAACCATTCCTAGGATTAAAAAACCGTATAAAAAACACTCAAAGTCGTTTTATAAACGTTAGTTCCTCAATCCTATAAAACAAATAAAACACTGATAAATAGCAAAATAAAATTAAAAACCCTTAGTTAC # Right flank : ATAATCAATTAGGAATTGTCAATTATGAATTACGAATAAAACACGTCTTTGCGAGCGGAACGTAGTTAAGCGAAGTAATCTGCTTATTGTTAGATGTAAATAATATTTTTAACTAGCAATAAACAGACTACTTCGTGCCTCGTAGTGACGATAAATTTTCAGTTGTCAGGGATCAATAAACAACGATCAATTTTGATAACTGTTAACCGATAATGGTTAATTGAAACAGTTGTGACTTACTTCTGTTTGGAATGTATTCACAGCCCTATATTAGAATTAATATCAGTATCTAATGTTTTGACTTACATCTGTTTGGAATGTATTCACAGCTAGAAACTCTAAGGTCTTTACTCCTATTGCGTTGTGACTTACATCTGTTTGTAATGTATTTACAGCTAATGAATTCTTTTAGTTATCTAAGTTCTTGTTGTGACTTACATCTGTTTGGAATGTATTCATAGCATAATCAATTAGGAATTGTTAATTACGAATTACTAATA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGACTTACATCTGTTTGGAATGTATTTACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.50,-2.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //