Array 1 270574-273161 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGYCM010000017.1 Klebsiella pneumoniae strain MRSN564304 MRSN564304_contig00017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 270574 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 270635 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 270696 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 270757 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 270818 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 270879 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 270940 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 271001 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 271062 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 271123 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 271184 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 271245 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 271306 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 271367 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 271428 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 271489 29 96.6 32 ............................T GCTGCACGATGTGATTGAGAGATGCCGGGAAG 271550 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 271611 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 271672 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 271733 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 271794 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 271855 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 271916 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 271977 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 272038 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 272099 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 272160 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 272221 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 272282 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 272343 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 272404 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 272465 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 272526 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 272587 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 272648 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 272709 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 272770 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 272831 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 272892 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 272953 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 273014 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 273075 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 273133 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCAACACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //