Array 1 1111-805 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLSY010000037.1 Hydrogenophilus sp. SS56 contig-100_36, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================== ================== 1110 37 94.6 29 G..G................................. TGTTGTTGGGTCGCGGAATATGGCCGCAA 1044 37 100.0 31 ..................................... TTCTTACCTGGAGATCATGCACGGACGCTGC 976 37 100.0 31 ..................................... ATCGAACAGATGAAGATGAGATCGAATTCTG 908 37 100.0 30 ..................................... TCTCGTCGACACCTATCTGCGCCCGCAGTT 841 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =============================== ================== 5 37 98.9 30 TGTCACAAGCCCAACCGGTTGGGATAAGGGTGTCGAC # Left flank : GGAGACGCTTCGGCCATCTACGAGCAAGGGGACAGCCTGGTGATCCTCAACGCTCCGCACCTCTCCTTTTCGATGACGGTACTCTACGGAACCCGAGCGTTTCTGCAACAGACCTTGGAAAAGTACTCCCAAGAGCAAGAGGCGCATCAACGGCGGCAAGAGTCGCTGCTCTGACCTGCTGACCGCACGTCCCGCAGCAAAAGGGCCGCTTCCGGTTACCGGGAGCGGCCTCGGCGGTTTTGCACACCCTGAGACGTTCGCGTAACCTGACGTTTCCGTCTTCCCCACCCATACAACGACAAAACGCCCACGCCGCTTCATCGCAAGCCGTCGCTGCGCCCATCACAGCATCCTTCCATCCCCATCGCGCTCAAGGCCTGACGCTGCAGCTTTCCGGTACGGAAAGGGGATTTACCGAAACAAAGAAAAGCAGGTTTCTGTAAAAAAGCAAAAAATGCAGCCGACCAGCGCGCCGGTCGGCTGCAGCACTCCATGAACAC # Right flank : CTACCCTTTCAGATCCCTTGTGGCGCAAGGCTTTCCGCCCCGTTCCATTCGGGACCTCCCCAATTTTGGCACGAAATCGGCCCGTTTCACAAGAGGTCCCGAATTTTGGTAAAAAGTTTGTGTTTTTTCGTCATGCTGCGCCCTCACGCACGCACCGCATCGACCGCCACGACGTTACGCGCGCGCTTGCTGAATTCGATGCCGACGAGATGTACCGGTAGCTGCTCCCCACGGTACTTCTCGGCGTACCCTTTGGCCAGGAGTTGCGCAAGCGCCGCTCCTTCGGGTTCGTCTGGAACGACCTTGAATTCGAAGAGGTAAATGCGCTCCGGAAGCTTCACGGTAAGGTCGATGCAGCCGTGGTGGGTGACGTCTTCGGCGATGAGCTCCAGCCCCAACGCCGCGAGGTGGCTATAGAAGACGCTGGCCCAGTACCCTTCGTAGTGGGTGATGGGGTTTTTGCGGTACCAGTCGTGCGGGATGCTGGCGTAGAGGCGTTC # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCACAAGCCCAACCGGTTGGGATAAGGGTGTCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 1 9077-8289 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLSY010000039.1 Hydrogenophilus sp. SS56 contig-100_38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 9076 36 97.2 32 ..G................................. TCGGCGCTTTGGCGGGGGGCGGGTGCTCCCAA 9008 36 100.0 31 .................................... GGCTGCTGCCGGAAGACCCGAGAAAGGTAAA 8941 36 100.0 33 .................................... ACTCACCGACCGAGCCGTGGTGAGCGGCTTGGC 8872 36 100.0 34 .................................... AGAAGCTCGAAGACGGAAGCGAGGAGGCCAAGTG 8802 36 100.0 33 .................................... GGCCTGGTTTTGGTTCAAGCTCCGCGAAGAACG 8733 36 100.0 33 .................................... ATCGTGGTTGAGGAGATGGTGCGCCAGCCGCTG 8664 36 100.0 31 .................................... CCAATCAGCAGATCAGGATGCTTGCGTTAAT 8597 36 100.0 32 .................................... TTCAGCCTGGCGGAAAGAATGAAACTCTCCGC 8529 36 100.0 33 .................................... GCGGCGCTGGAATGCGTTGTTCTCGCCGCTTCA 8460 36 100.0 33 .................................... GTTAAGCACCTCGTTAAGGAACGGGGACTCTCG 8391 36 100.0 31 .................................... TTGGCATCAAAATGAAAAAAACGGGCGCGCG 8324 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================== ================== 12 36 99.8 32 GTCACAAGCCCAACCGGTTGGGATAACAGTGTCGAC # Left flank : TCACTGATCGATACGAATACGTCCGCCAACCGCAGCTTGTTCCCCGTCTCCATGGGCCACCCCAAAAAGACAGAAAACTACACAAATCAAGACACTGTGTATAGCCCCCTTGGCAACCCATTAGATCGTGAACGACTATTTCAGCAGTCCACGACAGTGGCATTCATGCGATTGCCCT # Right flank : TCTACCCTTTCAGATCCCTTGTGGCGCAAGGCTTTCCGCCCCGTTCCATTCGGGACCTCCTCAATTTTGGCACGAAATCGGCTCGTTTCACAAGAGGTCCCGAATTTTGTCAAAAGTAGTAGGTTTTTTCTACCCATTCGCGCACCTGGTCGTGTTCGATCGCTTGGCGCAACGACGCCACGACGCTACGTATCTCTTGCTCCAGCGGGCGTTCGCCGCCCCGCACCATTTTGTCGAACGCCAACAGAAACGTCCGTCGCGCGTCAGGAGAGAGCCGCCACGACGCCGCATCGGGCAAAAAGTCGGCTTCGTCGATCTGTCTTCGTCCCCAAAGCGCCAGAATCAGCCGGTCGACTGCCGCCCGGAACGGTTCTACCACGTCGAACACCAGCGACGGATAGCGTCCAGCACTGCTGTGCAGCGCGCCCAGATACGGATCGAGCCCCTCCACCCGCACCCATCGCTCCACGACCGGAATGAGCAGCGTGTAGCCGAAATTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAAGCCCAACCGGTTGGGATAACAGTGTCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,1.01 Confidence: MEDIUM] # Array family : NA // Array 1 206502-201911 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLSY010000001.1 Hydrogenophilus sp. SS56 contig-100_0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 206501 36 100.0 35 .................................... CGGTCTTGCGTGCGGCAGGTACCAGGTGTGAATGA 206430 36 100.0 36 .................................... GTTGGGATAGGTGCTTGTTTCACTTCGGAAAGTTTC 206358 36 100.0 35 .................................... CCAATCGGCGAGTTTAAGTAGGTGTGCAATTGTGT 206287 36 100.0 35 .................................... TGTAATTTTCGTGCTTTTCATGGTTGCTCCTTTGC 206216 36 100.0 36 .................................... AGCTTGAGTAGGCGTGTAATTGCGTGTTCGGTAGCG 206144 36 100.0 35 .................................... CGAGTTCATTGTGCATTCGTGACCGAAGATGACCA 206073 36 100.0 34 .................................... CTGAGCTCACCGTTAATGTAGTCGTTCCACGCCT 206003 36 100.0 36 .................................... TCACCTTATTCAGATATAATTCACATTGCGATTGTC 205931 36 100.0 34 .................................... CTTCACTTAGTCTTCGAGCTTTACATACTGACCC 205861 36 100.0 34 .................................... TTCGCGCAACCATTCGGGAAAATAGCTGAGCTCA 205791 36 100.0 35 .................................... CGTTCCGATGAAATACATACCTGTAACCATCAGTC 205720 36 100.0 35 .................................... AACCCACCACGAGTAATAACCCATGGGGAGCAAGG 205649 36 100.0 36 .................................... CATTAATGCAACAATGACATCAGAAATGTCATTGTC 205577 36 100.0 37 .................................... ACCATTCATCAGTAGCCAACTGCCACCTAGATATACG 205504 36 100.0 37 .................................... CGCGTACTCTGCGACGGGGGATGCCGCTGATTCATCC 205431 36 100.0 35 .................................... CCGACACACCTTTTCTGATTGCTATCATCATATCG 205360 36 100.0 34 .................................... AAAAATATGAGCGAAAAAAGTACATCATCACTTG 205290 36 100.0 39 .................................... GGGAGGTTGTTGAGCAGAGATGAGAGGAAATGCCAGCTA 205215 36 100.0 33 .................................... GCCAGTCGAGTCTGGGCTCATTGAGTTCCTCCA 205146 36 100.0 38 .................................... CCTGCCTCGCCCTCGGAAACCCAAGACTGGCGCGGGTT 205072 36 100.0 35 .................................... AGTGCGAGATGATCGAAAAGCCAGAAGAATGGCGA 205001 36 100.0 35 .................................... GTACAACATACGCGCGAGTTTGCGAGGTGCTGCCG 204930 36 100.0 33 .................................... CAGTCGAGGCGGGGGGTGTTGAGTTCGTCTAGC 204861 36 100.0 35 .................................... CTGCTTTCTCCTTTTGTGGTTGTTCTCCTCACGCC 204790 36 100.0 36 .................................... GACAACCTCTTCCTCGCACCCGATCAAGTCGAACGG 204718 36 100.0 37 .................................... GGAGTTGTGGAAGGTGGGAATGAGGGTAGCGAGTTGG 204645 36 100.0 36 .................................... CGCATCCTTGCATTCCTGCGCGAATGTCATCCCAAA 204573 36 100.0 37 .................................... AAGTTGTCGTACTTGGGGTTGTATAGCCCAAGAAACT 204500 36 100.0 34 .................................... CTTTCACTTATCTTCAAGTTTAACATATGTCGGC 204430 36 100.0 37 .................................... ATACCGGGCGCATACGGTTTACCGGGTTCAACCCGAA 204357 36 100.0 35 .................................... CAACGAAATCGTCAATAAGGTTTTCGGCTTTTCTA 204286 36 100.0 35 .................................... TCACCATAGCGGTCAACCCAAAACGACGACGGCGC 204215 36 100.0 37 .................................... ACGCGCCATGCTTTCACTACCAGTAACAACTAGCAAA 204142 36 100.0 34 .................................... GGTAATATGTGGGCGTTCTCAACGAACACCACGA 204072 36 100.0 34 .................................... CACCAGGTTACATGGAATCCCCCACCGTTTTCTT 204002 36 100.0 35 .................................... GAGCTTTTGCGCGATGACTTGCCGGTCAATTCCGG 203931 36 100.0 37 .................................... GCCCAGTAGGCGGCGTGTTTGCGCTCTTCGTGACGAA 203858 36 100.0 36 .................................... TCCGATTTCATCGTCGGTTTCCCTGGTGAAACCGAG 203786 36 100.0 35 .................................... GCCGACGAGAGAAGCAACAATCGTTCCACCCAGCC 203715 36 100.0 34 .................................... ATTCGTCATTAGCCATGCTAACAACTGATTTTAG 203645 36 100.0 35 .................................... AATACTTTTTCAGTAAGCATGATATCCTCCTAAAT 203574 36 100.0 35 .................................... TTGACAAATTGTCAAAGAGCTGATCGATTCGCTTT 203503 36 100.0 34 .................................... GCAAGTTCGGTAGCCTTTTCGGCTGCGACTTTTT 203433 36 100.0 34 .................................... CGTAAGATGCGTTCAATTTTGCTTACCCAAAAAG 203363 36 100.0 37 .................................... TCAAGCAAGAACTTCATGCCTTTCTCCTCTCACGTGT 203290 36 100.0 33 .................................... AATCAGCGGAAGTAAGCATGATACCTCCTCTTC 203221 36 100.0 36 .................................... GGTTTCTTGGCCGCTTCTTGCTGCGCGGGCGCTATG 203149 36 100.0 35 .................................... CGCGGTCGACAGACATAAAAAAGCGCCTGGACGCG 203078 36 100.0 36 .................................... ATTCTTGTCCCCAGTCAAAAGCCACGACGGGATTGG 203006 36 100.0 35 .................................... CATTGACAAAAGCGTTTAGGTATATAGCACCTAGT 202935 36 100.0 35 .................................... TGAGGATGGCTGTTGATTATCTTCAGCCATCCGTC 202864 36 100.0 35 .................................... GCACCAGTTCGTCTCAAACGTAACGATTGAGGATT 202793 36 100.0 35 .................................... CTTTCTTTCATTTCAATCCTTTCACTCAATCAAAC 202722 36 100.0 36 .................................... TTCGTCTTGCGGCGCACGGTACCGTTCGAACAGTTT 202650 36 100.0 33 .................................... ACGAGCTCGCGTCGAGCTCTTGGGTGAGACACT 202581 36 100.0 33 .................................... ACGGCAAGTCACTGAACCGCCCCAAGTTCTTGG 202512 36 100.0 35 .................................... AACGAGCTCGCGTCGAGCTCTTGGGTAAGGCACTT 202441 36 100.0 35 .................................... CGTCCTTTGTCACTCTGACTTGGTAGATCATGGCT 202370 36 100.0 34 .................................... TCGAGATGCAGCACGAAGACAAAAGCATCGATCG 202300 36 100.0 35 .................................... GGAAACGATATGCTGAAGTCGATTAAAAAGTCTGG 202229 36 97.2 34 ....................T............... GTTGTCCTTCGTACGTATCTTCACGCATTTCTGC 202159 36 100.0 33 .................................... TGCCTCCGGAAGAAAAACCTTCGATGCCACCAT 202090 36 100.0 35 .................................... TCTTCGAGCAGCAATACATTTCTTTTTGGTAATTC 202019 36 97.2 37 .............................C...... AGTGGCAAGCGCAATCACCTCTGCGTACGTCGGGTCG 201946 36 72.2 0 .A......T....T....AA...G..C......CTA | ========== ====== ====== ====== ==================================== ======================================= ================== 65 36 99.5 35 GTTGGAATCATGCCCTGATTGAGAAGGGATTAAGAC # Left flank : CATGCCCTGATTGAGAAGGGATTAAGACTGAGATCAACGGGATCAAATTGACTAAGGCGCAC # Right flank : ACTTTTTTATTTTTTGATAAAAACAAAGAAAATGCTTATTTGTTTTGGTTGACGAAAAGTGAATTCTGATTTTTTTGCTTGATCAAAAATAAATTGAGGGCATAAAACAAAAAAACACCTGTTTGAACAGGTGTTTTTTTGTTTGGCTGTTTTTTTGTTATGTTTCATTCGAAATTGCGCCAGGGCATTTCTTCTGTATTGCTACCTGTTGAAGCGCTTCGTACTCACCTCTGAGTCTAGCATATTCAGTTTCTTGTTCTTTGGTTCCACCCAGAGCAAACAATGCTGGCCAAAAAAGAATCAGTCCCACGCCTGTGAGAATTTTGTCGTTTTGCGCTGCTTCGTCCAAACGCCCCGCTAGCTGTAAAGCTCGGTTATGTACGCGCTGCATTTCTGCCGTGATCTGTTCACAGTCGAATTGTTGATATTGTAGCGGTGAAACCGATTGAGCTGCAATGTCCTTGGATGCAGTAGCGCATCCAGTTATTTAGCTTGTAGTA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGAATCATGCCCTGATTGAGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 47862-45553 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLSY010000016.1 Hydrogenophilus sp. SS56 contig-100_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 47861 36 100.0 36 .................................... GCCATCAATGATCTCGATGTTGAATGGGGTGAATCT 47789 36 100.0 34 .................................... CACGCTAAATAGCGTGGTTTGCGTGCCTGGCTTT 47719 36 100.0 35 .................................... GATTGGCGAGCGTGTGATTATGCGTCGGAATTGGG 47648 36 100.0 33 .................................... AAAGCGAGAAAATCAAGCGTCTCGCGCGCAAAG 47579 36 100.0 36 .................................... GAGAGCATGGGGTGGAAAGTCCATGAGGACGGTGAA 47507 36 100.0 36 .................................... CGCACCCGTGCTCCACAATGCAACGACGAAGGGGCG 47435 36 100.0 37 .................................... TTGCGCATTCATGCATAATTCGAACATGAAACGCAAA 47362 36 100.0 36 .................................... TCAAGTAGCTATTCAAGATGACGCAAGAAAAATACC 47290 36 100.0 34 .................................... CAAGCGGTTGCGTAAAATTCAAGCGGCAGCAGAA 47220 36 100.0 35 .................................... AGAAGTTTCCGGGGTACGTCGATCTGATGAGCTTC 47149 36 100.0 35 .................................... TCTGACGGAACGGATGAGCTATCGGAAGATTGCGG 47078 36 100.0 37 .................................... TTGGGTAGAAGATGAAACGTATCACGAGCTCGAAGAA 47005 36 100.0 35 .................................... AAATATGCGTGCCAAGATGCTTCGCTTTTTCCGCT 46934 36 100.0 37 .................................... GGGATCAAGGAAATTCCATTTCAGTTACTCGATGGCA 46861 36 100.0 36 .................................... CATCTTCTCGGTGTGCAAGGCGTACAAGGCGCAGAA 46789 36 100.0 38 .................................... CGTGAGAGGAGAAATGAAGTTCTTGCTTGATTTGCCGC 46715 36 100.0 38 .................................... CTATTATCTGGTTTTTTTCTCGTCATAATGTTCATCAC 46641 36 100.0 35 .................................... CGAAGGAACGCCCGGACATTGCAAGCCGATACTGG 46570 36 100.0 35 .................................... CCTAGTTACATTCCGTACCTGGTGCGGCAGAAAAA 46499 36 100.0 34 .................................... GTCGGAACCGTTGTGTTTTTGGTTGTGGTGTTTC 46429 36 100.0 34 .................................... TTTCGGTGCTGTCGAAAATTGAATATCATGGAGG 46359 36 97.2 32 ...................................A TAAGGTTCGTGCAGTGATTGATGAGACGCTTG 46291 36 100.0 35 .................................... GGCGCTGCCGAAAAAATTCTGAAGGCAGGCCGAAT 46220 36 97.2 33 ...................................T CTCCGGCAACGCCATAGTCTACGACGACGCTCA 46151 36 100.0 36 .................................... TATGCAACCGAAATGAACATCGAGATCGACGTCATT 46079 36 100.0 33 .................................... TTTCCAGAGAGGCGGAAATCACCGAGATCGTGC 46010 36 100.0 35 .................................... ACGTGCTCAAGCACGAGTACGGGGAAGTGTGAGCC 45939 36 100.0 36 .................................... AACTACTACCAAATACTTACATTATTGCAGCGTCGG 45867 36 100.0 32 .................................... CAATTGCTGCAACAAGAGCAGGCGCAGCAAGA 45799 36 100.0 35 .................................... CTTTATGTATTGACAAAATCGAATGTTTTTCATAT 45728 36 100.0 34 .................................... GAATCGTTTTTGCAAAATTTTGTGGCTTAAATTC 45658 36 100.0 34 .................................... GCTTTCTCAGACCGAACCTCTTCCAGGTAAAGAG 45588 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 33 36 99.8 35 GTCTTAATCCCTTCTCAATCAGGGCATGATTCCAAC # Left flank : CCTTCTCAATCAGGGCATGATTCCAACCGTGCGCCTTAGTCAATTTGATCCCGTTGATCTC # Right flank : GCACCCACATTTTTCTGCTTTTTGGAACAATGGGTTACAACCACTGTTCCCAAAAAATTAACCACTTTGACTACGTGTGTTTTGTACAGTTGGTTGTGCGACATTGGATAAACCAAATTGTCAAGGAGCAAACAAAATTAATTGTACTTCAGAGATCTGGTGGCAGTACACTGAGATGGATCCCTTCCGGCAACACGGCCCGACCGATTCGCTTACGCCATCCTCCCGCGGGTAATGGGTAGCACCGCAGATCATCTTTTTTGGGGTTGATCAGGCAAACGGCGCGTTCCATGATTCTACGCAAACTCCGTTCATCGCCTTGGTAAATAAAGACGGAGTACTGGATGGGGGTAGCCACGCGTGTGAAATAGCGGTGCGTCCGTGCCAGCCGCTTGGGGTCCGTGATATCGTAGCAGATCAGAAAAGTTGCCATCGTGAACCACTCACTCGAGCGGGTCTGAAGCTGCCAAACTGTCGCTTGCTGAAGCAAATGCCTCCCA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCCTTCTCAATCAGGGCATGATTCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //