Array 1 595388-596179 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI965381.1 Fusobacterium nucleatum 13_3C adlCx-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 595388 35 100.0 38 ................................... CATAAACTATTTAATGACATAACAAATCACCTCCTTAT 595461 35 100.0 46 ................................... CTAACCTTTTTCTTTCCACTCTTTAAAGATACCTTTTTTATAAAAA 595542 35 97.1 42 .....T............................. CCTTTTTATAATTTTCTTTGTTAATCTGTGTTCAAGTCTAAG 595619 35 97.1 43 ..............................T.... CAATATTTCTTTTATTTCACTATAAAATCTTCCTTTACTTCCA 595697 35 94.3 43 ........A...........A.............. TAAAACAATTGGGATAAGTTAAAAGGAGTTGATATAATGGTAA 595775 35 100.0 38 ................................... TTATAAGTCCTTGATTGATACCATGTAGCCAGTTTTTG 595848 35 97.1 36 .C................................. TCTATTTCTTTTTGTTTATCTGACATATTTTTACTT 595919 35 97.1 42 ......................G............ TTTTCTCTATTCACTACCATTATTCATCAGCTCCTTCTCTTT 595996 35 94.3 41 ......A...............G............ CCAGTTTTTTTAAGTAAGTTTAAAATAGAATTTGTTGTAAC 596072 35 94.3 38 ....................A.G............ CTATGTTAGAAATTTGTAAGAATAATAAATATTGCATA 596145 35 82.9 0 ...................TA.A..T...T.A... | ========== ====== ====== ====== =================================== ============================================== ================== 11 35 95.8 41 ATAAGAGAGAATATAACTCCGATAGGAGACGGAAA # Left flank : AGAAGTCATAATTTAATTTAATAAAATAAGTGAGAATATAACTCCGATAGGAGACGGAAATACATCATCATCTATTTTTGTATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTATAAGTTTAATATTTTCTGGTATTCTCATTTC # Right flank : ACTCCTTCTATTGACAAGAAATCAATATCTTTTTATAATATCAATATAAAGAAATAGAATTCTAAAAAAGATAAAAAAGCCTAAAAATGCTATGATATTTCAATATTTAATCAAGAATTTCTCACAATTGAAATTTTTACAAAAAGAAATAAAAACTATTTAAGGAGGAATTTTATGAAAAAATTACTATTTTTTACATTGTTTATAGGAATTTGTATGAGTGGAGTAGCAAGTACAAAGGAAAAAAATCCAAATCTTTTAAAACAAGTATATAAAAAGGAAGAATTGATAACATTGGACAAAGAAAAAGTAGCAGGAGGAAACGGAACTTTACATGGGAAATTTGCCTTTACTAGAGATATGGCTACTGAAGAAGATGCTATCAAAGAAATAGGTTGGATGACACTAAATAAAGGAGAATCTGTAGGAGTACACCCTCATAAAAATAATGAAGATACTTACATTATTGTTTCTGGAGAAGGAATTTTTACAGATGGTTC # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAGAGAATATAACTCCGATAGGAGACGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 1356588-1353390 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI965381.1 Fusobacterium nucleatum 13_3C adlCx-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1356587 30 100.0 35 .............................. AGATTTAATGTAGAAGAAATAAAAATATTAGAAAA 1356522 30 100.0 37 .............................. CTTTTAAGTATTAGCTTGAACAATGTTGAGGAATTTG 1356455 30 100.0 37 .............................. GCTGATGATAAAACTATAAATATTACAGAAAACACTA 1356388 30 100.0 36 .............................. AGACTTTTACAAATGGAGAAATTGAGGTTGTAGAAG 1356322 30 100.0 37 .............................. AATTTTGATGAAAGAGGAGAAATAAAAGGCTTTTATG 1356255 30 100.0 37 .............................. GGAACTATTAAATGAAGTTGAGATAAAAAATGATGAT 1356188 30 100.0 35 .............................. ATTATTTCCTCAAGAGTTGGATTAATTCCACTAGG 1356123 30 100.0 38 .............................. GTGCTAGATAAGTTTAAATTAACATTATTTATTAAAGA 1356055 30 100.0 36 .............................. ATCATTTACATTTAACTTGTCAATTTCTATTTCATT 1355989 30 100.0 38 .............................. AAAACTCCATTAGAAATTATACAAAATGAGGTTGATAA 1355921 30 100.0 35 .............................. AAAAAGAAAGCTATTAGAGTAATAAAAGATTGAGA 1355856 30 100.0 35 .............................. ACAATTAGGAAAACTGGAATGTATTTAACTGATGA 1355791 30 100.0 38 .............................. GGAAAATATGATTTGATCCAAGTTATAGAAATATTTGT 1355723 30 100.0 38 .............................. AGAATAATTTATCATAATAATCTACATCTATTTCTAAA 1355655 30 100.0 35 .............................. GAGGATCTAAAATATGAAAATGATATAAAATAGGA 1355590 30 100.0 35 .............................. GATATGGCAAAAATTGTTTTATCTCTTTATGAAAA 1355525 30 100.0 35 .............................. CTTTCTATGACTACTGTTATGGAGGATTCAAAAAA 1355460 30 100.0 37 .............................. TGAGTAAATTTATAAAAATAAGTTTACCTCAAATCGT 1355393 30 100.0 37 .............................. ATCTTTAAAGATGATGTGTTGAGAGAGATGACAAAAG 1355326 30 100.0 36 .............................. GCCATTTTCTTTAAAATTTAAAGACCTTTCAGAAGA 1355260 30 100.0 36 .............................. GAGAGAAAATAAAAAATGGGATACATAAAAAGTTGC 1355194 30 100.0 36 .............................. TCAAAAAAATTTATAGATAGTTTAGTATCACATACA 1355128 30 100.0 35 .............................. GAATGAACCATTTTACTTGTGTTTCCAGCATCAAA 1355063 30 100.0 36 .............................. AAGTTAGAACATATGACATTAGATAAATGGGAAGCC 1354997 30 100.0 36 .............................. AAGAAAGATTTATAAAATTTAATTTTTTCAAGTTTA 1354931 30 100.0 35 .............................. TGCTATTTAATTTACTAGCATTAAAAGTAACTCCT 1354866 30 100.0 36 .............................. AAACGAGAGTCCATCATTTCAAACAAAGTCTTATTA 1354800 30 100.0 35 .............................. TTACAAAGTAAAAAATATTTTACTTCTATAATTTC 1354735 30 100.0 36 .............................. GGAAAAGAAGAGGTATGGTTAAAATTAGATGCTTTT 1354669 30 100.0 36 .............................. TTTTGAAGTTTCATAAAACTATTTATAAAATCTTCT 1354603 30 100.0 36 .............................. GTCAATGCAGTAGTCCTTAGAAAAGTAGGAGAAACT 1354537 30 100.0 35 .............................. TTAAAAAATTAGAGAATACAACAACAGCTGAAATT 1354472 30 100.0 35 .............................. TGTGGATAATATTTCAGAGTATCGGATGAAACAGG 1354407 30 100.0 37 .............................. AACTTAAATCAGTAAGTGATGATATAATTCTTCTATA 1354340 30 100.0 37 .............................. AAAGAAAATAGAGGATAGATATGTACTAACAGATGAA 1354273 30 100.0 36 .............................. GATTCATAACAGATATTTACATTTATATCTGTTAGG 1354207 30 100.0 35 .............................. TTAAAAGGAAATTTAACTATAACAGAAGAAACACC 1354142 30 100.0 35 .............................. AATGCAGATTTTGAAGAATTGTCTATTTATCAAAA 1354077 30 100.0 37 .............................. TACAATATTTTTTATATTTATTCAAAAATAAAAAACC 1354010 30 100.0 35 .............................. TTTTTTTGATGTCTTAAACATCTTTTATATTTTAA 1353945 30 100.0 35 .............................. CACAATATATTCTTGAGCTTGAAAAAAGATTTTCA 1353880 30 96.7 36 .............................G AATGGCTGCTGGATATTTTGCAATATCAAGTTTAAT 1353814 30 96.7 35 .............................G CACAACTTAACACCAGAACAAAAAGAAATTTTTGA 1353749 30 96.7 35 .............................G AAATCAAAAGATGGAATAGATAAAATTGAAGTGAA 1353684 30 96.7 38 .............................G TTTGATAAAGCAACAGCCTCTTCTACACTGATTTTATA 1353616 30 96.7 38 .............................G AGAATTTTTAGATGACATTTCTTCTGAAAATATGTCTG 1353548 30 96.7 35 .............................G GAAGATATAAAGTTAATAGATGCTATTGAAGTTAT 1353483 30 100.0 35 .............................. AGATTCTTAGCAAGACTCCAATTCCATTTCCAAGC 1353418 29 90.0 0 .......................AA-.... | ========== ====== ====== ====== ============================== ====================================== ================== 49 30 99.4 36 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : AATCTTTTCAAATGTGGTGGTGATAAAATGTATGTGGTTGCAGTGTATGATATTTCATTAGATGAAAAAGGTAATCGAAATTGGAGAAAAATTTTTGGAATTTGTAAAAGATATCTTCATCATATTCAAAATTCTGTCTTTGAAGGTGAATTATCAGAAGTTGATATTCAAAGGTTAAAATATGAAGTTTCAAAATACATTAGAGATGATTTAGATTCTTTTATAATTTTTAAATCAAGAAATGAAAAATGGATGGAAAAGGAAATGCTAGGTTTACAAGAAGATAAAACTGATAATTTCTTATAAAATTTATTGTCTACCTCTCATAATGTAAAATTACTGGAAGATTGACAAAAATCAAAAAAGTCTTTATTTATAAATAAATTTAAGAAAATAAAATAAATTTAAGAAATTAAATTTTTTTATTTTTTACTAAAAAGCTTATATTGACAAAAAGATATTAAAAAAGTATTATATGGGAGTAGCTTTTTTAGGTAGCT # Right flank : ACAGAAGAAAGGGATTGAAAAATAAAGACTTAATGCTGTTATATAACAAAAGAATAAATAAAAAATTAAAAGGATTAACTCTAGTTTTTTATATAAGTTAATCCTTTTTAATAAGTTAAATTAAATTTATTCAATTTTTTAAGGGGAGTACATTTTTTATTATGTTAAGTATAGCTTTATAAAGTAAACTAAGAATTAAGTATTCATAAAGTAACAGAAAAATTAAAAAAACGAAATTCAACTAAAATATTAATATAATGAACACAAAAATTTAAGATAGAAAATAAAAATTATCAATTATTAAATTAATAAAATTTTATTAAAAATTAAGCAAATTTCACAATAAAAATATTGCATTTAATCGTAATTGGTGTTAATATATACTTAATAAATTTGAAAGATAAATTTAAAATTTTATCTACTAAAAATAGGGAGTGATTATAATGAGTTTTTTAGGGCAAGTTAGAAAAAAAGCCTTACAAGCAAACAGAAGAATAGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //