Array 1 1822173-1827794 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFAG010000001.1 Hymenobacter sp. PAMC 26554 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1822173 29 100.0 36 ............................. TTCGCAATCAAGGCTCTAAGTGGATAAGCTATCATA 1822238 29 100.0 35 ............................. ACGAGCCCGGTTACGCGCTGTTGCGCGCCAAGCTA 1822302 29 100.0 36 ............................. ACCAGGCTGTTACGCTGTTTTACGACCCGGCTACCG 1822367 29 100.0 37 ............................. ACGGTAAAGAAATCGCCTGCTGGGCCTGCGCGGCCAG 1822433 29 100.0 36 ............................. ATGAGTGGGACTTACCGCCCACGCCTACTAATTTTT 1822498 29 100.0 36 ............................. TTCTACTTGCCGGTGCCGCCTCCTGTCGTTACTAGC 1822563 29 100.0 36 ............................. GTCTTTGACCATTTTCAAGGCGTTTGAGTGGAAACT 1822628 29 100.0 36 ............................. GATGCAGGCGGTCTTGAGGAGCTGCTTTAGCTGGTG 1822693 29 100.0 35 ............................. TTCCAAAGTACGTATATGCCACTAACATAGTACTT 1822757 29 100.0 36 ............................. TGGATGCCAGGCCCGCGGCCAGCGTGAGCTGGGTCG 1822822 29 100.0 35 ............................. ACCTGGCGCACGAATACTTTACGGCCGGCCCTGTT 1822886 29 100.0 37 ............................. ATTCGGGCCCTGCTCCGCCTAAGCTGTTACGCGCCAA 1822952 29 100.0 36 ............................. GCCTCATTACCACGAACCCCGGCCAGTCGTTTTCGG 1823017 29 100.0 36 ............................. TTGCCCGGCATCGGCGCGGCTACAAACAATTTGATT 1823082 29 100.0 35 ............................. GTTATGTCCGTGAACCGGACGCAGACCCCGACCTC 1823146 29 100.0 36 ............................. TTCCTAAAATTGCTCGGCTACGAGCCCCCTAAAGGT 1823211 29 100.0 36 ............................. TTTGTCCTCGCTTTTGTTCCTCAATACCATGTCTTG 1823276 29 100.0 36 ............................. TTGTGGTGCTCCTGGCGCTTTCTCCGCTGGTTCTCG 1823341 29 100.0 36 ............................. CGGTGAGCGTGAGCAGCATAGACCTGATTAGCGCCG 1823406 29 100.0 35 ............................. ACGTACTGTGCGACGCGGTGCAGCGCGGCACGCTG 1823470 29 100.0 35 ............................. ATTGGTTTTGCGGGCCGAGGGTATTGGTAAAAGTG 1823534 29 100.0 36 ............................. TTTCGTCACGGGTAGCCGAAAAGCGCAGGTCCGGGC 1823599 29 100.0 36 ............................. TTTTTGTATATGGCGTTCTGAATCATGAAAGCCAGC 1823664 29 100.0 35 ............................. TTGAAATGAGCGCGGCGCGGGTGATTTTGCTGCCC 1823728 29 100.0 36 ............................. CTGTTCAGATTCGGCCCGTCGAAGGTTTGATGGCCA 1823793 29 100.0 37 ............................. ACGAGGCCAGCAGCCCCGCCGGCCTGGCGGCGGCAAA 1823859 29 100.0 36 ............................. TTTTACGGTCGCGTAGCTTCAGGCCACGGTTCTGGA 1823924 29 100.0 37 ............................. TGGCCCCCGAGCCGCAGGGCACTAATCGAGCCGGCGG 1823990 29 100.0 36 ............................. GTGGGGTCGGCCTCCGCTTCGGGTTCCGGGTCGCGC 1824055 29 100.0 36 ............................. TTCCTGAGCTGGAAACGGGGTTTTCTTTTAATCGAG 1824120 29 100.0 37 ............................. CTATTGCTGTCCACCAAGTAGGCGTAGGCTTGCACGC 1824186 29 100.0 35 ............................. ATGCCGCCGAGCGCCTCAACGGCGAGATTGCCCAG 1824250 29 100.0 36 ............................. ACCTCAAAAAGCAACGCCAGCAGGCCCTGGAAGACC 1824315 29 100.0 36 ............................. GCTACCGTGAATTGCACCTTGCCGCCCACCATGCTC 1824380 29 100.0 36 ............................. GAGGAAAGGTCGCGGGGCCACTCAGGGCGAATGTAG 1824445 29 100.0 36 ............................. GTGTGCAGCGGCTCGAACAGGGGCGAGCGGAATTGG 1824510 29 100.0 36 ............................. AGAATACCTATACCTACGAGAAAGGCAGGCGTTGCA 1824575 29 100.0 37 ............................. TTTTGCTTGACGCTGGCATTACCGTACAGACTGGCAC 1824641 29 100.0 36 ............................. ACCAAAAAGTGATTGATGACCTGCTGGAGAAGCAGG 1824706 29 100.0 36 ............................. TTACGGGCGCGCAGCTGCTGCTCGACGGGGTACCCG 1824771 29 100.0 36 ............................. ACTCGGCCTTGGCCCTACTGGCCCCCAACGCCAGTG 1824836 29 100.0 36 ............................. ACCCTACCCCCTAGCCCTACCCCCGCCCGGCCCGTG 1824901 29 100.0 37 ............................. TTTACAAGCCACGCGCAATCGTCTTACCGTCAGGCGA 1824967 29 100.0 36 ............................. GCAAAAAGAGCCAGGAGGGCGTGAGCGCAGCGCAGC 1825032 29 100.0 36 ............................. CGAGGCCAAACGACTCGATTTCGCAACAGTGGCAAT 1825097 29 100.0 36 ............................. GTCTGAACGACAAAGCCCCGAAGCCGTGAGCGCCTG 1825162 29 100.0 36 ............................. TTTTGGCGCGGACAGCGGCAAGCTGCGTTACTTCCT 1825227 29 100.0 36 ............................. TTGGCGCGGCTGCAAAGGGGCTTCGCGCTGCTGCAA 1825292 29 100.0 37 ............................. TTTGTTCGTGTTTGGTTCGTGCTTTGTGCTTTTATTT 1825358 29 100.0 36 ............................. AAGCGTGGCCCCTCGACCTCCAAATACGCGGCCGAC 1825423 29 100.0 35 ............................. ATGATAACCCGGCTTTGCCCACGTCCCTACCCCTG 1825487 29 100.0 37 ............................. TTATTTTGGTTTGGGCCTGGCTTAAAAAAGCCGCCAG 1825553 29 100.0 35 ............................. ATTCCTTGAAATGCGGGGAGAGCTGCTTAGTTCCC 1825617 29 100.0 36 ............................. TACTTCTGGTCAATCCAGCGCGCCACGGGGTAGAAT 1825682 29 100.0 35 ............................. TTTCTTCAAACTGTGGACGCTGAGCGTGCGGGCGC 1825746 29 100.0 36 ............................. AACCAAGCGGCGGCGGCAAGCTGATGAAACTGCAAG 1825811 29 100.0 36 ............................. TTCTCGGCCATTCTGTTCGCCGTGGATATGGCTTGG 1825876 29 100.0 36 ............................. GGGATTGGCAAAATAAGGGGGCTGGTGAGCAGCAAA 1825941 29 100.0 36 ............................. AATTCGGGGACATCTCGGTGCATCCGCAGTTCATCG 1826006 29 100.0 37 ............................. TGGGGAAGCCGGCGCACTGGCTGATAAAGCCGTCCTG 1826072 29 100.0 37 ............................. TTGTTGAGGAGCCGTATCAGCACGTAGCTGTAATTGC 1826138 29 100.0 36 ............................. ATGGGTCCAGGCAGCCCGGTACTGGGTTGGGGGCGG 1826203 29 100.0 36 ............................. AACTCGACCCCGCCGGCCTGTGGCTGGCCAGCGGTC 1826268 29 100.0 36 ............................. ACAAGACAACCCGCGTGAATGCTGCCAGCCCCTTCA 1826333 29 100.0 37 ............................. CTATTCTGTTATTAGCCCTGGCCTACGTGGCCAAAGC 1826399 29 100.0 36 ............................. GCTACTAGCCCCGTGGTGCCGGTAGCCGCGGCCACC 1826464 29 100.0 37 ............................. GTACTACGCTACTGGTATGAAGAATACCTGCCTGAGA 1826530 29 100.0 36 ............................. TAGGCCTGCACCAGCGTGTCGCGGCTAGCCTTGGGC 1826595 29 100.0 36 ............................. TTTCTGCGTGAATTTACGGAACGGCTGCTGGCGGCC 1826660 29 100.0 36 ............................. ACTTCGCCCGCCTGCCGCGTGACCGTCCGGGGGGCG 1826725 29 100.0 35 ............................. ACGACTGGAAATTCCTGCAAGCCCGTTACCAGAAG 1826789 29 100.0 36 ............................. TTCTGAGGTCAATTTCTGGCAATGGATGGGCACCGA 1826854 29 100.0 37 ............................. CTGCTCAACGTTGCGCCGCCGCCGGACCCTACGGCCG 1826920 29 100.0 36 ............................. TGCTAGTCTCGCTTTTCTCTGCGGAACTGCACGTTG 1826985 29 100.0 36 ............................. GTAGCTGACGCACCTGACGCGCCCACCCCCGACCCG 1827050 29 100.0 36 ............................. ACCACGAGGACGACTACAAGAGCTTCTGGCTCTGGC 1827115 29 100.0 37 ............................. ACCTTCCTCTTCAAGGGCAAGGAACTGAACGCGGGGG 1827181 29 100.0 37 ............................. TTGCAAGGTCCCCGCCTGCTTGACCGCGCAACGGGAG 1827247 29 100.0 36 ............................. GTGGTCGTTCCGTTGCCGTTGCAAGGTCCCCGCCTG 1827312 29 100.0 36 ............................. ACGCTTACGGCCACGTGGCCCATTGGGACAGTCGCC 1827377 29 100.0 36 ............................. TTGCAAGGTCCCCGCCTGCTTGACCGCGCAACGGGA 1827442 29 100.0 36 ............................. GTGGTCGTTCCGTTGCCGTTGCAAGGTCCCCGCCTG 1827507 29 100.0 36 ............................. ACATCACCCGGCCGCAGCTCTGGCCTACCCAAGACC 1827572 29 100.0 36 ............................. GATTTTAGCCTGGTGGGCACGGACGCGCCGGCCGGC 1827637 29 100.0 35 ............................. TAGGTGTCGTCGTCGAGTAGTGCGTCCTCGGCCTG 1827701 29 100.0 36 ............................. GCGTAGCCCAGCGCACAGTCCTCGAAAATAAGAATC 1827766 29 79.3 0 .....C.....G............ATT.G | ========== ====== ====== ====== ============================= ===================================== ================== 87 29 99.8 36 GCTTCAATTGGACCGAGTGGAATTGAAAT # Left flank : GGTGGTAGGCCAGCCCCTACCCCCCTTCCACACCATGTACGTTATTCTCGTTTACGATATGAAGCAGCAGCGCGTGGGCCGGATGCTGAAGCTCTGCCGCCGCTACCTGCACTGGATTCAAAACTCCGTTTTTGAGGGCGAAATCAGCGAGGTAAAGCTGGCGGAGCTGCTGGCCAAGGCGCGCACCATTCTGAAGGAGGAGGAAGACAGCGTTATTCTTTTCAAGAGCCGCACGCACCAGTGGCTGGAAAAGCAGGTAGTAGGCCGCGAGCGCAGCCCGTTGGATACCATCCTGTGAGCCGCCGCATCGTCGGTCGGCTAACCAGCGCGGCCTTTACTGACCCCAAATGCCACGCAGAGCGCTAACCATCTGATTTACAGAGTTGTCTATCCCCAGGGTAAATCCTACTATTTGCCATCGACGACTCACGAGGTTTTTTAAAGTATTAACATGTGGGTTTCCCGAGCACTAGCGCGTATAATTGCGCTGGTTTTGGCGG # Right flank : GGCTTCGATTACTTAGCGTATCACTTTCTAGCTGACAAAGTACAGGCTCGCTGACCAAAGCCAGTGGGCCTGTACTTTGTCAGTGTCAGAACCTTAGCCCGCTAAAAGTTGGCCACCACCAGCGCCTCGGCGCGGGCCAGGGCAGCAGGCAAGCCGGCCGCGTTTTTGCCGCCAGCTGTGGCGAAGAACGGCTGGCCCCCGCCTCCCCCTTGAATATCCTTGGCCAGGTCACGCACCAGGGTGCTGGCGTTGAGCTTGCCAGCTTTAACTATGTCGTCGTCGAGCATCACGGCCAGCTGAGGCTTGCCGTCGAGGTCGGCGCCGAGAAACAGCACGAGGCCGGGCACGGCCTGGCGCAGGTCGTAGGCCAGCTTCTTGAGGTCGTCGGCGCTGCTGGCCTGCACCTGAGCGGCCAGGAATTTCACGCTCCCCAGGTCCTTCACCTGGCCCACAAGCTGCGCCTTTTGTTGGTTGATTTGCTGCTGGCCAAACTGCTCAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATTGGACCGAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 3828052-3828290 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFAG010000001.1 Hymenobacter sp. PAMC 26554 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 3828052 35 74.3 41 .C.C...........CCCT..........C.C..T AGGAGGCAATGGGGAAACCCGAATCTACTAGCGGCGCGGCT T,C [3828057,3828082] 3828130 35 100.0 28 ................................... AGTTAGCCATCATCTTGGCGGCGCGACT 3828193 35 100.0 28 ................................... GTTCAGATGCCCTTGCATTGGTGCGGCG 3828256 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 4 35 93.6 33 GGCAGAGAGACGCGAAGGGTCGCGTCTCTACGGGC # Left flank : TATCTGTACGCAGGACCGGCAGCCGGCTTTTGGCACAATGGAAGTGCCGGGCAACGACTGGGATGCCGCTTTTGTGCGCCCTACCCCCCTGGGCCAGCGGGTGCTGGCTGGGTGGGATAGCATCCCCGTCTTCGCGCCGTTTGCCACTCCCGAGGCGTTCGTCCTCATGCCCGACCACGTACACGGCCTGCTGGTGTTTGAGAAACACGAGCCCGCCGGCCTGCCCCTGGCTTACCAAAATCAGTTTGGACCCCAGCGCGCTAATTTGGCCTCCGTGGTGCGCGGCTTCAAGAGTGGCATCACCACGTATGCCCGCCACCAGGCCCTGCCCTTCCAATGGCAAGCCCGCTACCACGACCGCATCGTGCGCTCGGCCGATGAGCTAATCCGCATTCGCCACTACATCGCCACCAACCCCAGCCGCTGGCAGCACGAGTGGGACAACGGCGAAGGCCTCTACCGCTGAAAAACGCTCCTCAGCGACAATATAACGCCCAAGT # Right flank : CGTTTGGGCATAGCTTGGTTGCGCTGCCTGAAAACAAAAAGCCCCTGCCAGATACTGGCGGGGGCTTTTTTAAAACCGGACCGGCGGCTTACTCGCGGCCGATGGGGTAGTACGCCTTGCGGCCGTCCGGGTACACGCCTTCGACCAGCGCGCCGGAGTTCTCCTTAGCCTGGTCGAGGTAGGCTTGCACGTCGGCGGGCTTGCGCACCACGCTCTTATCGATGCGGGTGATGATGAAGCCATCGGCCATGCCCGTCTCCTTAAAATTGCTGCCCTTGATGCCCGTAATCTGGGCTCCGCCCTCAATGCCGAGGGAGTTTTGCAGGCGGGCATTCACGGGGCCGATTTTCGCGCCCTCGTAGCTCACGACCGCCTCGGCGGGTAGTTCGCGCACCACAGCCGTGGTGTTAGAGGCGTTGAAGAGGGTAGCATTGGCACTCAGCTTCTCGTCGTTGCGGAGGTAGCCCACCTTAATCTTATCGCCGGGGCGGAAGCGCGAC # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCAGAGAGACGCGAAGGGTCGCGTCTCTACGGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.80,-16.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //