Array 1 295156-295791 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNGZ010000001.1 Hungatella hathewayi strain 1001285H_161024_A12 NODE_1_length_522881_cov_24.3671, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 295156 33 100.0 33 ................................. ATCTAAGGCATTTTTTATAAAGAAATTTATTTC 295222 33 100.0 34 ................................. CGATATTAAGTTTTTGCAGTCACTATGCAAGGCA 295289 33 100.0 34 ................................. TAATACTTCTCTCGTACACAGTACACATAATCCC 295356 33 100.0 34 ................................. CTGCAAAGGAAACGCCGTGGAGTCCGTCCATAGC 295423 33 100.0 34 ................................. ACCTGAATATTGACTATGGTTTGTATGGGGTTGT 295490 33 100.0 35 ................................. ACCTGTTCTCCATAGCCAATCAGCAGGACTACATT 295558 33 100.0 33 ................................. TTTATATGGCCCTTCATAATATGCAGATATATC 295624 33 100.0 35 ................................. TGCTCCATGCGCAACTTCCGGCGGGTGAATATGTC 295692 33 100.0 34 ................................. TATCCGGGCGAAGTCGGACGCCTCGGGGTTCACG 295759 33 93.9 0 .......................A........C | ========== ====== ====== ====== ================================= =================================== ================== 10 33 99.4 34 GAGTCATCTCCTGCGGGAGATGTGGATTGAAAT # Left flank : TATTTTACAGTGTCTTTTTATGACAAGGAGTATAAAAAAGCACTGAACATCTGCGGAACACGGTCCGGACGTGACTGCGATAAGGCGGCAGAAGCCGGGCTGACCCCTTATTTTATTGATGGTACTACGGCCTTTGAAGAAGCAAATATGATTTTTGTCTGCCGGAAGCTATACTGTGATCCAATGCCCGGTGATAATTTCCTGGATAAGGAAAATGATGAGAAATGGTATCCGGATAAAGATTATCATACAATGTACATTTCGGAGATTGTGAAGGTGCTTGTGAAAGACTGAGAAGAAAATTAGCTGTGAGGAGTGGCTGCACGGGGCGGTAGCTGGTGCGAACCTTAAGTGAACATAGAATTACTGGGAGGTTCGCACTGGAAATTGGGGGGAAAATGGGGGGAATATGGAGTTGATGATTGATTTTTAAAGGGATTGTTGTACAATATAGTTAAGGATGTGAGGGGAGTTGGGGAGGGAGATTGGGGAAAATTGCT # Right flank : CCATATGGAAAATCATACTAATGTCAACCAATCTGTAAAAAAATGTCCCACAAACACTTTGATTTCCACAAAAAAGGACCTTCAGATCACCATATCCGAAGGTCCTTTTTTTATCCAATTTCCTTTTTCTACCTAATCACCAAGATAATAAAATGCTGTAAAATACCCTTTCTCATTATAGTAAAGATCATTACCGTATACGGTATATTCAGCCGAAGCCTCCTCTTTGCCTTCTTCAACCGGTTCTCCGGCGTATATTTTCTTCTGAGTTTTAGATGCTTCCGCAAGGTTGGTATAGGTGCCTGTGACGGCGCCTTTGAGGATATAAATATTGCCCTCATAGACCGTTTTCATAATCGTATCGTCACTGTCCTCCCACAGGGTATACGTTCCGTTCTCTAAATCCGCGGTGATCGCCGCCTCATTGCCGTAAGTGGAGGGATCCATACCTTTGTCATACGTCAAATAGCCGTTTGAACCGCTGGGCCCGGCGTTGGGAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTCATCTCCTGCGGGAGATGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 2 373909-374077 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNGZ010000001.1 Hungatella hathewayi strain 1001285H_161024_A12 NODE_1_length_522881_cov_24.3671, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 373909 33 100.0 35 ................................. TTGAGATCGAACCGCAAAGGGCAAAACCTGAGAAA 373977 33 100.0 35 ................................. TAAATCCTAACAATCACGATTATAAAAAGTTTCTT 374045 33 93.9 0 ......................A.....A.... | ========== ====== ====== ====== ================================= =================================== ================== 3 33 98.0 36 GTCGCCTTCCGCAAGGAAGGTGTGGATTGAAAT # Left flank : TGCTGATTACATATGATGTAAATACAGAGACTGCCGCAGGCAGAAGCCGCTTACGCCGAGTCGCAAAGCAGTGTGTTAATTATGGCCAGCGTGTTCAGAACTCGGTCTTTGAAAGCAATATGGATGCGGCAAAATGCAGAGCTGTAAAGGGAATTTTAGAAGGAATTATTGATAAGAATGTGGATAGCCTCAGATTTTACTACCTTAGTGATAATTATAAGCACAAGGTGGAACATATTGGTGCGAAACCAGGATTTGATGTGACAGAACCATTAATTTTTTAGGGCAGTTGTTCTTTAAATAAATAGTTAGATAATTCTTTTGTATTAAAGTGCGAATGTCAAGTGAACATTAAAATACCGGGAGATTCGCACCTGTATTTTAGATGTAGATATACCGAAATATGTAATATAGTTTGATAAAATGATTGAATAAGTCAAAATGATAGAGTTCTGTTGCTGATGAGGAGAAATTCACTTGTAATTTGACTTGTATTTGCT # Right flank : TATTAACGTATTTCTCGAGGCATTTTACATCTCCTTCACTCCATATTCCCTGTTGACAACGAACCTCCTTGTCTCAGGGAATCTAATAGGTGCCTAAATGTTGAGAAAGGCGTTTAAAACAGCTGTCTGGAGCAATCGCTTACATGATACCCCACTCATTCTCAACAAGTTTTCCCTGTATACACGGAGAGTTTTCCTGTATAACCTGTTAAAAATCTTTCAAAAATCTATTACTCATCGGTATGCAGTATTGTATTTATAATTGGCGTTATATCATTTCCTTTCTTTAAACAGCTGCAATAATACCATATTACCATACACAGCCTGTGCCTGCTTCTGCACTGCTGCCTCTCCCCTCATCAGAAAAAAACAATTATTTAACACAGAACGGCAAAGGTTCCCGAATTACTGAACCTTTGCCGTTTTAATGTCAGAAATAAACCTCATATCCTTTCAAAAAGCACCATAATATGGTAAAATATTCCGATAATCACGCCCGG # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTTCCGCAAGGAAGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 1 56951-57251 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNGZ010000003.1 Hungatella hathewayi strain 1001285H_161024_A12 NODE_3_length_328904_cov_20.0993, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 56951 33 100.0 34 ................................. AAATGCTATCAGAGATATCCGCGCCTCCCGGCTG 57018 33 100.0 34 ................................. ATTCGATGCATAAGGTATTTCGATATACAGTCCC 57085 33 97.0 34 ......................T.......... ATGAATCCTTCCGGACAAATTCTGTCGCCATTGT 57152 33 93.9 34 .................C....T.......... ATGAAACTCCCTTTTCCAGTCAGCGCCGCAAGGA 57219 33 69.7 0 .................C...TT.A.A.AGTTG | ========== ====== ====== ====== ================================= ================================== ================== 5 33 92.1 34 GTCTCTGCTAGCGATAGTGGAGGGGATTGAAAT # Left flank : GTCTTTATTGATTGAAGAAATAAACAAAAAGATTTCAACAAAAGAAAAATTTATTACGTAAGCAGATCCCGAAGATTTGGGAAAACTATGGCGTTGGAAATGCTGGCTTCTTATTATATAAAAGAGGGGGACTGCGGACTCTTTATTCAATAATCTTAATTAAAGAATTTCACACAAATATAGAACATTTAAATTGCCATAATGTAATCTATATTAATTTTACTGATTAGTTTGAGGTTATATTATCTGGTCAACAAACATGATACGAAGGTGGAACATTTTGGTGCCTATGAAGGGTAAATGTAGAAAAACCTCTCATTTTCTAGCCTGTGAATTATGGTGCGAACCAGAAGTGATCATAAAATCCCTGGGAGGTTCGCACCGAGAATTTCGCGGTTATGGAGGGAAGATAGGAGAATTGGATGAATTGAGTTAATGAAATATATGCAAAATACCCATGATTATTACTGGTTATATGGTATAATATGTGTGAATTTGCA # Right flank : GGGAAAAGATACTTTCCTTTGCACCCCCCCCTCTGTCTCCGCTAGCGATAGCAGAGTGTAATCGATTATTACAAAAATAAACCGTTGAGGGAGTCTCTGCCAGCATTAGAAGCTTATATTAAATTTATGAAAAAATAATTCACAGACGTTAAAAATAAAAAGACAGAGGAGACAAGGATTGAAATACATTTTTATACATGGACTTGGACAGGGGCCGGATAGTTGGAATAAAACGGTTTCCTGCATGAGAGAACAGGAAGAGATTCAATGCCTGAACGTATTTGCTTTAAAAGATGGGGAAGAGATTTCGTATAGCAGAGTATATGAGGATTTTTCGGCGTACTGTGAGTCTATAAAAACGGAGTTTGGGCTTTGTGGTCTTTCTTTGGGCGCTGTGATTGCATTAAATTATGTGGTGGAGCATCCGGGAAAGGTAACGTCGCTGGTTTTGATTGGGGGACAGTACGTGATGCCGAAGGGGCTTTTAAGACTGCAGAATA # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTGCTAGCGATAGTGGAGGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.94%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //