Array 1 141356-141088 **** Predicted by CRISPRDetect 2.4 *** >NZ_VATN01000025.1 Escherichia sp. E2586 sequence25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 141355 28 100.0 32 ............................ ATTGCTTGAGACGAATACGCAGGCCGTTGGTC 141295 28 100.0 32 ............................ CTTTATTGTGTCGTAGTAAAGTTGGGCCACTT 141235 28 96.4 32 ....................T....... AGCTATGCAAATACGCCCTTGATAGCTGAACA 141175 28 100.0 32 ............................ GATACAGAACCTACATTGGCCTCGGAGGATTC 141115 28 89.3 0 ....................T..TC... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 97.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATGGCGGTGAGGCGGGGATTCGAACCCCGGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTGCCTGACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCAAGAAGAATTTATATGGATTGATTCGTTTGGTTACGCAATGAACATACTGTTCGCGCCCGGAGATTTTGACCGTATGTGTTCTGGTCAATTGTTTATCAAAATCTATGCATAAAATATGAGATTGAAGAAGTACCAAATAGACCCTTTTTTTAGGTTGAAATGTAACTCATTGATTTTGTTTATTGCTTTTTTGATGTCTGGAAAAAGGGTTTAAATCTGCGACTTTGTAAGTTTTAACAGTAAATCAATCGGATAGTCTGCTATTATTCC # Right flank : CTTAACACACCATCCTCCAGTATTTATTCCCCGTAACTCCAGACGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAGCAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTATTAGGCAACGTTTCAAGAACGGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGTGCGCTAATTCGCAACAAACAGGTTTGGCACATAACTCCGAAAACACACGGCTAAGCCGCACTATAAGCGCAACGTATAAGGGAGCGGTGAGA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 14322-13993 **** Predicted by CRISPRDetect 2.4 *** >NZ_VATN01000010.1 Escherichia sp. E2586 sequence10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 14321 28 67.9 32 NNNNNNNNN................... TCGCTGAGAGCGCCCGCAGTTTTCTCCTCTTT 14261 28 100.0 32 ............................ AGTGACATCTGTTTAGCTACAACATCGCTAAT 14201 28 100.0 32 ............................ AACCTTTGGTTAGCGTCCAGACTGCGGTTAAC 14141 28 100.0 32 ............................ TGCCAGATAGTCAGCGCGCGGCGGTATGCGAT 14081 28 100.0 32 ............................ TCTCAGATTACCGGGACATTGGCTGTTGTCGG 14021 28 92.9 0 ....................T...C... | C [13998] ========== ====== ====== ====== ============================ ================================ ================== 6 28 93.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCCGGTTTGTTCACTGCCGTACAGGCAGCTTAGAAAGCTCACTGCGGATCTGTCCATACACCTACCCGGTTCACTGCCGTACAGGCAGCTTAGAAAGCCCGGAGGCCATGTTTGCGCTGGAGTTCAATTGTTCACTGCCGTACAGGCTGCTTAGAAAGCATCAGACTGATTGCCGCCCAACACCAACAAGTTCACTGCCGTACAGGCAGCTTAGAAATTATAGATTTGTTTGCTTTATAGGCTTGGTTGGTTCACTGCCGTACAGGCAGCTTAGAAATCAGGAAATAACGCAGCAAACGTCACCCCCGCGTTCACTGCCGTACAGGCAGCTTAGAAAAAAACGCAACAAGCCACTACAGGAAGCCATACGTTCACTGCCGTACAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TACGATGATGGCAGAAATTTAGCTGCGTTATGGCGCTCTCAACTCCGAACCATTAGCCTCAACGTGCAATAACAATTGTGATAATTGCGATAGAAATCAATTTCTCGCACAGAAATCAATGCTGTACTAATCCTAGCTCCTTCAAATAAAAATAATCACAGGATGTGTTTATGTCTTCCAATTACCTTACTCCATCTGACCTCAAAACCATTCTCCACTCTAAACGCGCCAATATTTATTATCTGGAAAAATGCCGGGTGCAGGTGAATGGTGGGCGAGTGGAATATATTACCAGTGAAGGTAAGGAGTCGTACTACTGGAATATCCCCATTGCGAATACCACGGCATTGATGTTGGGGATGGGAACATCCGTTACTCAGGCGGCGATGCGTGAATTTGCCCATGCCGGGGTGATGGTGGGCTTTTGTGGGACGGATGGCACGCCGCTGTATTCGGCAAATGAAGTTGATGTTGATGTCTCCTGGTTCAGTCCGCAAAGC # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 14934-14485 **** Predicted by CRISPRDetect 2.4 *** >NZ_VATN01000010.1 Escherichia sp. E2586 sequence10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 14933 28 100.0 32 ............................ GGTAGCAAATCAGCTTTAGCGCGCGCAAAAAC 14873 28 100.0 32 ............................ GGAGGCGACGGAGGACCAGGGCGTGCCGGTTT 14813 28 100.0 32 ............................ GCTCACTGCGGATCTGTCCATACACCTACCCG 14753 28 100.0 33 ............................ GCCCGGAGGCCATGTTTGCGCTGGAGTTCAATT 14692 28 96.4 32 ..................T......... GCATCAGACTGATTGCCGCCCAACACCAACAA 14632 28 100.0 32 ............................ TTATAGATTTGTTTGCTTTATAGGCTTGGTTG 14572 28 100.0 32 ............................ TCAGGAAATAACGCAGCAAACGTCACCCCCGC 14512 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGTTTATCGTCGAGTTGCAGGTTCAGTTGGATCAGAAAGGTGTTTCTCTGGAAGTAAGCCAGGAAGCGCGTAACTGGCTGGCTGAGAAAGGTTACGACCGGGCGATGGGCGCACGTCCGATGGCTCGTGTGATTCAGGATAACCTGAAAAAACCGCTCGCTAACGAACTGCTGTTTGGCTCGCTGGTGGATGGTGGCCAGGTGACAGTCGCGCTGGATAAAGATAAAAATGAGCTGACCTACGGGTTCCAGAGTGCACAAAAGCATAAACCGGAAGCCGCGCATTAATCAGATTGTTAAGTAGGTTGGTGAAGTCCGTAATCTCGTCAGGGGTTACGGACTTTTTGTTTATAGGGTGGGGGAAGTTCGGACCCTTTTTTTGATGATGATGGTAAGTTGTTGATAATTAGTGCTGCTGAAAGGTAAGAATAAAAAAGGGTTGCAGCAGTAAAATGAGATGGTTTTGCTTTATTAACAACGGGCTAAACGTGTAGTATTTGA # Right flank : AAAACGCAACAAGCCACTACAGGAAGCCATACGTTCACTGCCGTACAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTACAGGCAGCTTAGAAATCGCTGAGAGCGCCCGCAGTTTTCTCCTCTTTGTTCACTGCCGTACAGGCAGCTTAGAAAAGTGACATCTGTTTAGCTACAACATCGCTAATGTTCACTGCCGTACAGGCAGCTTAGAAAAACCTTTGGTTAGCGTCCAGACTGCGGTTAACGTTCACTGCCGTACAGGCAGCTTAGAAATGCCAGATAGTCAGCGCGCGGCGGTATGCGATGTTCACTGCCGTACAGGCAGCTTAGAAATCTCAGATTACCGGGACATTGGCTGTTGTCGGGTTCACTGCCGTACAGGCAGTTTCACAAATACGATGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //