Array 1 50012-48839 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JPJD01000013.1 Intestinimonas butyriciproducens strain ER1 contig_13, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
     50011	    33	 100.0	    33	.................................	CTCCCGCTTTGGCCTCCGGTAGGACATCCCGGT   	
     49945	    33	 100.0	    34	.................................	CCCGCCGTCCCAACAAAGATCGTCCAAACTGACG  	
     49878	    33	 100.0	    34	.................................	TCCGGGAGCTCTGTGGTCTCTGTGTTATAGACCG  	
     49811	    33	 100.0	    35	.................................	AATCTTCTCTTCCTCCTCGTCCGTCATATCTTCCA 	
     49743	    33	 100.0	    33	.................................	GTCGGCGGTCATGCCGTCGAATCCTTCAATCGT   	
     49677	    33	 100.0	    33	.................................	AATCTGGTCCATCAAAATGACATCAATTTCCGA   	
     49611	    33	 100.0	    34	.................................	GGCGCTCTGCTCCGTGTACTTGGCACAAAGCTGG  	
     49544	    33	 100.0	    36	.................................	AACAGGTGGAGGACGAACTGCGCAAGGCGCTGGGGG	
     49475	    33	 100.0	    34	.................................	CCGGCAAGACCCTGCTGGCCAAGGCTGTGGCCGG  	
     49408	    33	 100.0	    36	.................................	TGTGACCTGTCTGGCCTACGGCAACGGATATTTTGC	
     49339	    33	 100.0	    34	.................................	TTAGTTATAAATTAGATTATTTGAGACATCGCTA  	
     49272	    33	 100.0	    34	.................................	TGCGGCGGAGTGGCATGTTGAGAAGACTGGTAGG  	
     49205	    33	 100.0	    33	.................................	ATCTGTTACGTCATCTGATAAGGCTACGGGCCT   	
     49139	    33	 100.0	    34	.................................	CATCCGAGGCGACCTGACAGTCCATGTGGACGGC  	
     49072	    33	 100.0	    33	.................................	TGCGGCTCCGCGTGATTGACTGCGGCGATGTCC   	
     49006	    33	 100.0	    35	.................................	CCCCACGGCTTTCCGCTCCTCCTCCGACAGTTCTC 	
     48938	    33	 100.0	    35	.................................	CACACCCACTTTGAAAGTCCGGAGGCTCATGAGCA 	
     48870	    32	  78.8	     0	...................-....A..CTCC.C	|                                   	
==========	======	======	======	=================================	====================================	==================
        18	    33	  98.8	    34	GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT	                                    	       

# Left flank :   ACTTGGACGCTTACCCACCTTTTTTGTGGAAGTGATAGTATGCTGGTTTTAATCACCTATGATGTGAACACCGAGGACGCCGCTGGCCGCAAACGTCTGCGGCAAATCGCGAAGCAGTGCGTCAACTACGGACAGCGGGTGCAGAACTCTGTCTTTGAATGTCTGCTGGATGCGGCCCAGTGCCGCATGTTACAGGCAAAGCTGTGTAAGATCATGGACCCGGAAAAGGACAGTCTTCGTTTTTATTACTTGGGAAACCGCTATGAAAACAAGATCGAGCATTTTGGAGTAAAGGCATCCTACAACCCAGAAGATGTATTGATGCTTTAGGTGCGAAACGTAAGCGCGCAGAAAATCGCCGAGGTCTCGCACCAGATTTTGCAGTATTATCTGTAAGGAGGCAACCTTATTTTTCAAAATCGGATAAGAGTTAGAAGAGGATATTTGTAAGAATTGTCTATTTTTCACGAGAACAGCTTGAATTTTTAGCTGTTTTTGCT
# Right flank :  TTTATACGGTCGCTCACATATGGATAAGACCGCTAAAAAATCCAATGAATCTTTCGTAGCAGCATCCTATCCTACTTCTAACAAATTTCTAACAAAACGATAAAAATGAATATCCAACAGGCCCAATGGTTTCTGAGATTTTATTCCGCATGAAACCCGGAACTCCTTGTGCCACAGCGGTTTTATGGGGTATTACCAGAGACAGCCAAACACCCGTAGGAACATACCATGCCCCCTTCGAGTTCTGCTGTCTCCACCAGAAAAATCCATGGAGCCGCAAGGCTTTGGGGATTTTTCGTTTTTGGTTAATTTTTAAATGTGACATTTCTTTGTATCAAATGTGTTTCTTTTATGAATTTTAGCACTCCTATATTGACAGTGCTAAAACAGAGGACTATAGTAGAGCCGTACCAAGGGAAGGGGACCAGAAAAGGTCTTCTCTGCAGGGCAAAAAGGTAAGACAACGAATGGAGGAATGACTTATGTTGCCCAGCATTTTC

# Questionable array : NO	 Score: 9.20
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-9.80,-10.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,10.42   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//