Array 1 182581-179931 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAQSI010000003.1 Klebsiella pneumoniae strain BP11474 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182580 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182519 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182458 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182397 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182335 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182274 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182213 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182152 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 182091 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 182030 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181969 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181908 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181847 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181786 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181725 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181664 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181603 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181542 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181481 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181420 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181359 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181298 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181237 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181176 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 181115 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 181054 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180993 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180932 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180871 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180810 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180749 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180688 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180627 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180566 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180505 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180444 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180383 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180322 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180261 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 180200 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180139 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 180078 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 180017 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179959 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //