Array 1 53998-50602 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQAQ01000073.1 Flammeovirga sp. SJP92 Scaffold4_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 53997 37 100.0 35 ..................................... TTCTTACGAGAACTTAGTAGGTTACAATCTATATG 53925 37 100.0 38 ..................................... AACAACACACTAGACATTATGAAATCCAAACTTGTAAC 53850 37 100.0 36 ..................................... TTATTAAATGAGTTTTTGATGTTTTTTAATTCTTGT 53777 37 100.0 39 ..................................... TGGCTATCTGTTGTCTCTACGATTTCAATTTCAATTCTT 53701 37 100.0 36 ..................................... GCATCAGCATGACGCTTACCAAGTTTAGCAGTTGCT 53628 37 100.0 36 ..................................... CTCTTAAAATTGTAATATGAATTAACGACCTCTTGT 53555 37 100.0 38 ..................................... CACCTCTCCTGTAAAGTATACAGTAAATCCTATTACTT 53480 37 100.0 36 ..................................... TCATTTCGATTATGCCTACTGGTACTTTTCTAACTT 53407 37 100.0 36 ..................................... CCTTTTGAGTGTCATTCACCTCAATTATTTGAATTT 53334 37 100.0 35 ..................................... GATCCTTCACCATAGTGGTAAAGGTTTTGTAATGG 53262 37 100.0 34 ..................................... TGCTTTTTGATAACCATTGACTTAATAATAGCAT 53191 37 100.0 34 ..................................... ATGCTCTTGATTACGCATCCCTCGTAACCTTCTA 53120 37 100.0 35 ..................................... CGGTTTATATAGAACTGCGATGGCTGATCGTAACT 53048 37 100.0 36 ..................................... AGACTATCTTCCCATCTTGCAGTACGCGAAGCTCAA 52975 37 100.0 36 ..................................... TATATTCTAATTCAGTTTTCATATATGAAATTATTT 52902 37 100.0 35 ..................................... TTCTATATAAACCATTACGGATTTCTAGCTCTTTT 52830 37 100.0 38 ..................................... TTCTATATAAACCATTTCTGACTTCTAGTTCCTTTTCT 52755 37 100.0 35 ..................................... CTTTTTGAGTGTCATTCACCTCAATTATTTCAATT 52683 37 100.0 37 ..................................... TTTCATCACTAAACTTGTTGCGATGTTCTTCTTTAAT 52609 37 100.0 38 ..................................... TTTATTTTCTTCATATCTTTAGCTTAATATGTTGAAAA 52534 37 100.0 36 ..................................... AGTTTTGTAGGCTTTCCTTCTCGTGTACAAGTGTAT 52461 37 100.0 36 ..................................... TTTAGATGGTATCATTCGACGAACTGGATCTGTTTC 52388 37 100.0 35 ..................................... GACAATGTTACCTACGATAACCTTGCTAACCTCGA 52316 37 100.0 38 ..................................... CAAGAAGGATAGAGAGCATCACTCTCTATCCCTTTTTT 52241 37 100.0 36 ..................................... AACTATTTACATGAATATTTATACACCTTAACATGC 52168 37 100.0 37 ..................................... GTGAATGTAACTCTCATAAGGGATGGTTATTTGTATC 52094 37 100.0 36 ..................................... TAGTTGTCAATACAATCTCTTACATCAATAACTGTT 52021 37 100.0 35 ..................................... CCTGTAGGTGCTACGTAATCTTCTCGTTTCATAAT 51949 37 100.0 38 ..................................... GCATTTTGTTGGTATATGTTTGACTTATTCATAGTTAT 51874 37 91.9 37 ........................G......GA.... AGCATCTGGAATCCTCGAGGACATGTTGGCTCGAATG 51800 37 81.1 35 AC......A...G......G....G......G..... AACTCTGAAGGTACAGCATTTGATATTCCCATTTC 51728 37 94.6 35 ........................G......G..... ACGCAAGGAGAAAATCCTGCGATAGAGTAGCCCAT 51656 37 91.9 37 ........AA......................A.... CTATACTGTTTTAGATTCTATAGTTTTGATTTATAGA 51582 37 86.5 35 A...........G.....T.....G......G..... TTTACAGTGTGACTCTCAAGCTCAGTGTCAACAAT 51510 37 86.5 36 ........T...G...........G......G..A.. GCCATATGAGCAGGTTTAGGGAATTCACTACCTGAT 51437 37 97.3 37 ...A................................. TTGATCTTCTCAACTGTGTCATAATTACGTTTGAATA 51363 37 86.5 35 ........A...G......G....G........A... ATAGTTGCCCCAGCACAGTGTGCTGGCTTAGGGAA 51291 37 73.0 34 A.......AA.....T..GT....G......GA...T ATAGGAGTCTTAACTTTGGTTTTTGGATCTTCCT 51220 37 83.8 35 ...C..T.A...G...........G........A... GTTTCCATTTGTACTGAAGCATGACCTTTAGACCA 51148 37 86.5 37 ........A...G...........G......GA.... AGCATCTGGAATCCTCGAGGACATGTTGGCTCGAATG 51074 37 81.1 35 AC......A...G......G....C......G..... AACTCTGAAGGTACAGCATTTGATATTCCCATTTC 51002 37 89.2 36 .......C..G.............G......G..... TTCAAATTCCTTTTTAATTAATACAATTCTTTCGTT 50929 37 83.8 36 A.......A.........TG....G........A... GTTTAATTTACTCGTTTACCTTTTGAATCTTTCCAA 50856 37 94.6 36 ...A....T............................ TTCTTCTTATATTTATTTCTTAGTTTCCAAATGCCT 50783 37 89.2 35 ............G......G....C......G..... GGATCTGAAGTTTTTAAACCAAGTGCACTTAATGT 50711 37 89.2 36 A.................G............AA.... AGCTCTTTTATCTGATGTGAAATTTGTTCACTCATT A [50699] 50637 36 81.1 0 A...........G......G....G.......-.A.A | ========== ====== ====== ====== ===================================== ======================================= ================== 47 37 95.1 36 GTCGAAGACCTATATCCAAAAAAATAAGGATTGCGAC # Left flank : AGAACTTCAGTGATGAAAACTATTCTAAAGCATGGTTGTGATCGGATTCAGAAATCAGTATTTATTTCACTGCCACTCAAAAAGAAAGGCTTTCATCTAATGTATGATGAATTAAGAGCACTCCTAGAAGAAAAAGGAGATACTGAAGACAGTCTATTCTTCTTCCCAATGGATAGTAAACAATTACAATCCAGTCAATTTATTGGAAATGAGAACGCTATTCAAAAAATATATTCACATAATTTAACGAAGTACTTTTAGATTTTTTTATTGAAAAACAAGACCTTTAGATGAAATCTACTAAGATTTATACGATTTTTGACGTATTGAATCTCTTTTTTCTATGTCGAAATTTTTGACAGTATAGAAAATGAGTAAAAACACACTAAGTTAAATACTATTTTATCTTAGAATAATTTATGATTTATTCTAAGATAAATTTTCATTATTCCTATTTTAACATTTTTACTCATTGATTTTCAATTTATTGCAAAGAAGCT # Right flank : ACACATTTAATAGCCCCAATATTTTATTAATCTAAAGAGAGCATTTCCATTCAATTTTTATCTTCTAAGAGTGAAGTAAAGTAGATTGTAAACTAAGTTTTCATTCCTTAAATTGAGTTCTTCTTTTGAAGAATAAATAGTTATGTATTGCAGTTCATGAGGGCAATGTAATGCAACATCCCTACAGCATTGCTCTTAATAGGTTATGACAAAACACTTCTCTTTTAATAACCAACAATAATTTCGTTCACTGCGTATTCAGCTATTTTTATTTGTAGCATTCAACCCCCAAGCTCTCCAAAAAGTAATATTCGATTTCTTCCCTCAGCTCCCCTATACCTTCCAAACAAACACATCACATAGCATTCTAAGACAAAATCCCCCTTTCGAGTTGCATCTTTTTCAACTCATAACAATGGACTTTTACTGAACAACAAATCTCCCCCCTCTATTTGTGTAAAATATACACCCCGCCAGCACCCCCAATCTAGTATTTTTGA # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGACCTATATCCAAAAAAATAAGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.90,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [77-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //