Array 1 625101-627844 **** Predicted by CRISPRDetect 2.4 *** >NC_006449.1 Streptococcus thermophilus CNRZ1066, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 625101 36 100.0 30 .................................... AGAACGTATTCCAAAACCTCTTTACGATTA 625167 36 100.0 30 .................................... TTAACTGTTATCAAAATGATAAGATAGTCT 625233 36 100.0 30 .................................... CGTTGATGTTTATTCAAGTAAAATAATTAA 625299 36 100.0 30 .................................... TCCTTTCACGGGTAGCACACTAACATACAC 625365 36 100.0 30 .................................... GTTGGCAATGCAAACAACCTTTATGAACCG 625431 36 100.0 30 .................................... TTTATTTCCTTGCGATAACGTTCCACCTTT 625497 36 100.0 30 .................................... AGATTATAAGGAACACAACCAACTATATAG 625563 36 100.0 30 .................................... ACGACATCAAGCTGATTGTCTTCTACATAA 625629 36 100.0 30 .................................... TTTGGAATACTGAATGTTTTACTGAAAATC 625695 36 100.0 30 .................................... ACACCACTATCTTTTCCTCCTGAAAATGAA 625761 36 100.0 30 .................................... GTAATTCCACGAAATTATCAACCTTATGCA 625827 36 100.0 29 .................................... TTGGAGGATTGCCCCATATTCCCAAGAGT 625892 36 100.0 30 .................................... GAGAGGCGTTAAATATAGAAATGCAAGATT 625958 36 100.0 30 .................................... TTTTAACGTCATCAGTCCACCGCCTTAAAT 626024 36 100.0 30 .................................... CACCTCTTTCGATGGAAAGGTATCCTTCTA 626090 36 100.0 30 .................................... GACCAAAGTTTGATTATAGAGCTATACACC 626156 36 100.0 30 .................................... ACCATCATTCTTACCATTACAACTGTAATG 626222 36 100.0 30 .................................... ATACGAATTCGGTTCGCACAATTACAATTC 626288 36 100.0 32 .................................... TATCAACGCAATCATTACAACAACTTCAAACA 626356 36 100.0 30 .................................... ATCTACGTGTCAATACATATCACAAAACAG 626422 36 100.0 29 .................................... ATTTTTAGAAATTTCTGATATAATAATGA 626487 36 100.0 30 .................................... TTGTTGGAACAAGGACGACTTGGTAAACTA 626553 36 100.0 30 .................................... CATATTAAGCTGACTGGGCCTAATGCTTTT 626619 36 100.0 30 .................................... TTCATAGCATACCGTAGTTGTAAAATCTAT 626685 36 100.0 30 .................................... AACATTTAGGGAATGAAATTGATAAGACTG 626751 36 100.0 30 .................................... AACATGAGAAACTGTAGAAAACAAGCAATA 626817 36 100.0 31 .................................... TGGTGAAGATGGCAGTCATAAATGGCACATT 626884 36 100.0 30 .................................... AAGGGTTGAAAAATGTTGGTATATCAAACG 626950 36 100.0 30 .................................... TTCTGGTAGTGGATTTAGTCAAACAGATGT 627016 36 100.0 30 .................................... TCCATAGAGCGTCTTAAACAAAGAATAGTC 627082 36 100.0 30 .................................... GTTGGCAATGCAAACAACCTTTATGAACCG 627148 36 100.0 30 .................................... CATATTAAGCTGACTGGGCCTAATGCTTTT 627214 36 100.0 30 .................................... TTCATAGCATACCGTAGTTGTAAAATCTAT 627280 36 100.0 30 .................................... AACATTTAGGGAATGAAATTGATAAGACTG 627346 36 100.0 30 .................................... AACATGAGAAACTGTAGAAAACAAGCAATA 627412 36 100.0 31 .................................... TGGTGAAGATGGCAGTCATAAATGGCACATT 627479 36 100.0 30 .................................... TTATGATTGAATGACATGGTTGTATAAGTA 627545 36 100.0 30 .................................... TTTCTTTAGGAATACCAGGGAGTTCAGCTT 627611 36 100.0 30 .................................... TGGCAGAGATTACACAGCAACGGAAACAGC 627677 36 100.0 30 .................................... GGGTATCATTGTATCTAGTGATGGACCTGA 627743 36 100.0 30 .................................... ATTTGAAAAATGCACAACAGCGTTTGATAG 627809 36 91.7 0 .........T........................GT | ========== ====== ====== ====== ==================================== ================================ ================== 42 36 99.8 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATGGCTTTATCTCAGAAGAATCTTATACTATTTTTTATAGGCAAATCTGTCATCTGGTCAAGAAGTATCCAAATCTAACCTTTATTTTGTTTCCTAGTGACCAAGGCTATTTAAAAATTGATGAAGAAAATAGTAGGTTCGTCAATATTTTATCTGACCAGGTGGAGCATTTGTATGATGTTGAGTTTATGTATGAAAGAGTAATGAAATATTATCCAAGTAATGATTTTCCGACGAGAGAAGGTTTTAGGATGTCTTTAGAAACTGTGACACCTTATTTATTGACAAAAATGCTGAGACAACCTAGTCTCTCACTTGTTGATTCAGTAATATTGAATATCCTAAATCAGTTGTTTCATTTTAGTTACCGTATAAGATATTCTCAGACACCTGATAAGGAACTATTACATAAATTTTTAGAAAGTAAGGATTGACAAGGACAGTTATTGATTTTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG # Right flank : TTTGATTCAACATAAAAAGCCAGTTCAATTGAACTTGGCTTTTTAAAATACACGATAAACATAAGGATTGTCAGGCTGACTAACCTCTTTAATCTCAGTCAAATTAAGGATAGGGAGGCTCTGTTTAAGGTTTTGATAATAATTCACAGTGATGGTACCAGTGACTGTTACCCAGATATTATCCTTAAAGGTTTGGTCGCTTCCTGTCGTTGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATACCGAAACGGAAGATGAACTGATATCCCTTGGTCTGTGGATCATTGTAAACAAAGCCGGTATAGGTGACCTTCTTGCCCACGAAATCGTTTGGATAGAGATAGATGAGCTCAATGACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTCTCACGTCCCTTGTACTTGTCTAGTTCCTTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCCGGCCTTAAGTACTGGGTAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //