Array 1 16905-15683 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLVE01000012.1 Exiguobacterium sp. TNDT2 NODE_12_length_16872_cov_48.048187, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 16904 32 100.0 34 ................................ CTCCCGTACCACGCTCAACCAATCGAGCGCCGCC 16838 32 100.0 34 ................................ TCTCCCTTGTTTTTAGGTGTTGAAATAATTGATT 16772 32 100.0 35 ................................ AGGAGGAAACACTCGTCTACCAAATCCGTGAACTT 16705 32 100.0 34 ................................ CGAAACGCCTCTGCCGCGTCCTTAATCGTCACCT 16639 32 100.0 34 ................................ ATCCGAGGAGATGGTCAAAAACGAGGTCGTGGCG 16573 32 100.0 34 ................................ CGCCTGCATCTTCAAGTTTTCGATGGTCATCGGT 16507 32 100.0 32 ................................ TAAACGGCTTGAAAAAGCGTTACCCTATATAG 16443 32 100.0 34 ................................ GTCGTATTATAAATATCAATTGCGTTCGATTTTT 16377 32 100.0 34 ................................ GAAATGGGCGACTGTCTTGACCTGTCCGATATTA 16311 32 100.0 35 ................................ CTCGAATACAGCGACAAGGTCCGCGAGAAGGTGCT 16244 32 100.0 34 ................................ GGAAGGGGTTTAGCTGATGAATCCGAGACAAGTT 16178 32 100.0 36 ................................ ACCGCAACAGCGTGCCGCGTTATTCACACAAGCGAC 16110 32 100.0 34 ................................ GGCTTTATATAGATAGTCAACGCCCGACGGTCGA 16044 32 100.0 34 ................................ TCCCGCGCCTTCACCGACAAGCTCATCCGCGAGG 15978 32 100.0 35 ................................ ATCGCTTGGCGAACGTCGAAGGGTTTCGGGATGTA 15911 32 100.0 33 ................................ CGGCGTTAATCCATGTGAAGAGCATGTGCACCG 15846 32 96.9 33 ...................T............ GAGAATGCGAAGGACAACATCGACCGTATCGAC 15781 32 93.8 35 ..........A.........T........... TTCCCCTCTATGCATTAGGCAACACCTCCTTGGCT 15714 32 81.2 0 ..........A.A...T..AA........G.. | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 98.5 34 ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Left flank : CGCATCGGGATCG # Right flank : ATCAACAAAAAAGACTGCTTGTTATCGGCCTTGTATTATAGCTTTTGTAGGTGATTGGATTGAAACGGAAATAAAAAAAGCCGCTCTGAACTTAGTATTCAGAACGGCTTTTCATCATTAATTTGCTTGTTTCAACTCTTCAGCGGTTTCCGCTTTATCGTCAAATTTCTTAACATCAACCCGCTTCACAAAGAACGCTAAGATGAGCGCCAAAATGTTCATGCCAAGAGCGACGTAGAACGAATACTGGATCCCTGACAGCAACGCTTGTTGTGTCAACGCGCCCATCGCACTCTCGGTGAGTGTCGCTGGGTCGACGCCGGTCATGAGCGACTCGGCCTTTGTTTTCGTGACCGAGTTCATGATTGTGACGAGGACTGCTGTCCCGATCGCACCGGATACTTGTTGGGCCGTGTTGTTGATGGCCGTTCCGTGCGGGTTAAGGCTCGTCGGCAACTGGTTGAGACCGTTAGTCATGATCGGCATCATGACCATCGACA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 2696-15 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLVE01000017.1 Exiguobacterium sp. TNDT2 NODE_17_length_33845_cov_46.845264, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2695 32 100.0 34 ................................ ATGAAGTAGTTGCCCAGACTGTCACGTGCGTTAT 2629 32 100.0 36 ................................ ACGGAGCATGGCGTAGATGTCGTTCCCGACCGCGTC 2561 32 100.0 34 ................................ AATATCATCTGGATTATAAGAGGCATAGTAACTA 2495 32 100.0 35 ................................ TCCGTACACCTTGTGAATCGCCGCTTGGAGCTCGG 2428 32 100.0 34 ................................ CTGTTGAACCACCAATCGAGGAACCACAGCCGTA 2362 32 100.0 34 ................................ CTCGAAGACGACTTAAACGAGTTCGGACTCGACC 2296 32 100.0 35 ................................ ATTCGTGAAAGAAGTCATCTCCCGTTGCTCGTATA 2229 32 100.0 34 ................................ CATCGCACGTCAAGCGCTCGTTATCTGTTTCGGC 2163 32 100.0 33 ................................ CTCGGTGACTATCGCATGCAGGTGACGGAGGAC 2098 32 100.0 35 ................................ TTCCTCGAACATGACGGCATCGATCAGACCGGCCT 2031 32 100.0 34 ................................ GCATTCGGTCGACCCGGTGTCGCCTCTTGAATCT 1965 32 100.0 34 ................................ ACGTTCGAGCTCATCCGTTTGGAGGAGGGGCGTC 1899 32 100.0 37 ................................ ACGCGCAGGGATGACGACTGTTGCCACGTACCAGGCG 1830 32 100.0 35 ................................ AATAGCGCGGCTCTCATGTTTCTCGATAAGCCGTT 1763 32 100.0 35 ................................ AAGGATGAGATATTCCAATATTCGTGGAACGAGAA 1696 32 100.0 34 ................................ CTTACACACACACGTTATCAAGGAGAGCGATTTC 1630 32 100.0 35 ................................ AACCGGTCGATGATGGCATCTTGTAGCAGTGTCGA 1563 32 100.0 34 ................................ ATCACATCGGATGCCGATACGGAGACGGATGAGC 1497 32 100.0 34 ................................ CGGTGACCGCGTGCTGACGACCGACTCGCCGAAG 1431 32 100.0 33 ................................ CATCATGACTGCAAAGTCCTCGTAACTCATCTT 1366 32 100.0 33 ................................ GGGGACGTCTAGGGAAATAGACACGCGAGCGGT 1301 32 100.0 35 ................................ CGAAAATGGATCACGAGCGAAGTGTTGCCGGCCAT 1234 32 100.0 35 ................................ ACAACAATGGTCCTCTATAAGTTGGTGGACAAACA 1167 32 100.0 33 ................................ TAACAATTCCAATCGAGCGTCATATCCTTTAGC 1102 32 100.0 35 ................................ GACCGTGGAGCGGTTGTAGTCCTGCGACAGCCCGA 1035 32 100.0 33 ................................ TTCAATGAAAATGACCGCCCACCCGTTCTCTTC 970 32 100.0 33 ................................ AACAGGTACTTGGACCACGTGAATCCGCTCATC 905 32 100.0 35 ................................ GTATTTGAACCCACAGACCGTCCGCTTCTTGGAAT 838 32 100.0 34 ................................ GCAAAACGCGTCGCCAATGAGTTTGTACGCTTTA 772 32 100.0 35 ................................ CGCTACTTCACACAAGGACGACATACGCCGATGGC 705 32 100.0 33 ................................ ATATGATCCGCCATCGATATAGTAGCCATCAAA 640 32 100.0 34 ................................ GCCTGTCATGTAATCAATCTGACGCGGGTCGCCG 574 32 100.0 34 ................................ ACTATGAAATAGTCGAAAAAGTAGCAATCCGTAT 508 32 100.0 34 ................................ TCCCGCGCTTCCGCCTTCACTGCCTTGAGAACCA 442 32 100.0 34 ................................ ACGTCATCGATGAACGACGCCAGGCTGAGGCGAG 376 32 100.0 34 ................................ ACGCCGCTCAACAACTTGGTCACAGTCCTCGGCC 310 32 100.0 33 ................................ AGTAACAACGAGGTACGCGCCATCGCTGGGAAA 245 32 100.0 35 ................................ CGTCACTCGATCATATCGAACAAAATGAAACAATC 178 32 100.0 34 ................................ GTAAGACACACGACCTTATCCAGTCCGAGAGTTA 112 32 100.0 34 ................................ TAGTACCATCGCTGGCCGCTCCATTTATGTTGCC 46 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 41 32 100.0 34 ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Left flank : CCTACTTTCTTATATAAGTGAGGGGAATGTATGCTTGTATTAGTGACATACGACGTTAACACGATTTCACCTGGAGGCACGAAACGGCTCAGACAAGTCGCAAAAGTTTGTCAGCAATATGGTCAACGAGTCCAGAACAGTGTGTTTGAATGTATCGTTGATCAGACAGAATTTACAACTTTGAAATTACGATTGAAAGAAATTGTGGATGCGGATAAAGACAGTCTTCGATTTTATCGTTTAGGCAACCATCATGCCACTAAAGTGGAACATTACGGAACGAAAGAATCTTTAGATTTGGAAGGACCTCTCATTTTTTAAAGGGGAAGTTGTTTTTAGTGAGTGCGAACATGTAGCGCACAGAATTTTCTAGAAAGGTTCGCACTCGATTCTTCGGTAATAGTCATCTAACTTGATAGTAAATCTAGTCGTTGTCATACTTAAACGGATAATATTGTTTGTTAGATTTATTTTAGGTGTTTTTTTAGTCGAAATTGGCT # Right flank : TCGATTCAACCAGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [10.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //