Array 1 551713-550886 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LSLG01000001.1 Gardnerella vaginalis strain N165 scaffold1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	============================	=======================================	==================
    551712	    28	 100.0	    33	............................	CAAGCAAAAGCGTATAATAAGTAGAGTCTAAGA      	
    551651	    28	 100.0	    33	............................	CAGATTTTACTGAAGCTTGACGCGATTATGCAA      	
    551590	    28	 100.0	    33	............................	TACGTCATCTTCATAGCTATGTGCTTTAACCCA      	
    551529	    28	 100.0	    33	............................	CTGTTTCTTATCGACTACAATCTGCATTTTTTT      	
    551468	    28	 100.0	    33	............................	CTTATTGACAGGATCCATGCACAATGTTGTGTA      	
    551407	    28	 100.0	    33	............................	CGGTGGATTGTCAATAACCACACAGTCTTTCGG      	
    551346	    28	 100.0	    33	............................	CATACCATTCATAGGGTCAAAAAGTGAACCCAT      	
    551285	    28	 100.0	    33	............................	TTGGATTCTATAAACATCACTTATCAGCTGTAC      	
    551224	    28	 100.0	    33	............................	TGTGCTAGGAGGCGCGATTGATAGCTTTATTGA      	
    551163	    28	 100.0	    33	............................	CGCCTACGCGCTGCACTTCTAAGCTGTTAATCG      	
    551102	    28	 100.0	    33	............................	CTACTGTGTGTTTCGCGCCAGATTGGTCTTCGT      	
    551041	    28	 100.0	    39	............................	CTAAAGCTGAAATCAGAGCTAGGAAGGTTACGGNNNNNN	
    550974	    28	  85.7	    33	NNNN........................	TAGCCTTCTTCGCAAAGCGAGGATTGCCTTTAA      	
    550913	    28	 100.0	     0	............................	|                                      	
==========	======	======	======	============================	=======================================	==================
        14	    28	  99.0	    34	GTCTTTCCCGCATACGCGGGGGTGATCC	                                       	       

# Left flank :   TTTATTCCTAATGAAATTATTGAGCTAACTGGTATTACATCCAACATGCTTGAATCTTATGGTGTCAGATTAGATTTAGCATTAAGAGAATTTATTGATTTTGTGGGAAAATTACCATTATTAGGATATAACGTATCGTTTGATATTGGATTTTTTAATTCGGCTTTATTCTCATTAGATGAGAAACTCAGCAGTGCTTTTTCTGTTAATAAAGTTATTGATATTTCTCGTTTTGTAAAGAAAGAAAAGAAATTTTTAAAAAACTACCAATTAAAAACAGTGCTGCACGAATACAACATTGCTGAATCTGTTCCACATAGAGCTCTTCTGGATGCTAGACTAACAGCGCATCTTGTTTTTAATTTGAAAGGATTGCTAAAATTTATTTCATAAAAATAGCATACTGTTGTACTACGCTCTGTGATATGTTGAATCTGAAAAGTAAATGAGATTTGACTGTTCATGTTATAGAAATGGTCATTTTATTGGGATTTTTAAGT
# Right flank :  TAAGCACCCTAAAAACGCGGCGGGTATAACCACGTCTTTCCCGCATACACTGGATAAAACCTACATGTGCGGCAAGTGTGGTTGTAGTAGTCTAGTGGTGGATATGATAGCGGACGCACAAGTGGAGGTTAAAACGCTACGCGGCGTATTATATCGCGCGCGTTGATTGTTTTTATAATAGGGTAGGCAAATAGGGTAGGCAAATAAAAACTTGCCTACCCCTTATTTTTACTGTTGATTGTTTGACTCTGCTTTAGCTGCTTTACTAACCGCCTCTTGCAGCGCTTGCCATGATGACGGCAGCTCTACAGGGCGATGCGGGCGGCGCGCAGCCCAATCACGTATAATGTCATAATCCCACGCAGGCTTTGCTGTTAGCGCACCAACTGAGTGCGTTGGTAGTGGGATCAGACCGCGGAGGCTACTCGCATCTTGACCATCTAAGGCTGCACGCCTAGAGCGCACCAAATACTGGCGCATAGACTCATAACTGACACCAA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTTCCCGCATACGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-9.80,-9.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//