Array 1 38014-32861 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTH010000006.1 Lactobacillus delbrueckii subsp. lactis strain NCIMB 702466 NCIMB702466-i1-1_scf6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 38013 28 100.0 33 ............................ CGACTAGGCCAGAAGTAGGTGGACAGGCTCGCT 37952 28 100.0 33 ............................ CTATATTCTACCATCAACCCCATCTATGTCATG 37891 28 100.0 33 ............................ TATAGTTGTAAGGTTAAGGGGGACACAAATAGG 37830 28 100.0 33 ............................ TTTTTTTGCTGCGCTTGTTTTCGTTTGCTTGAT 37769 28 100.0 33 ............................ TAATTGCAATATTCTTCAAACATAGCAACGATA 37708 28 100.0 33 ............................ TAGCATTGAGGCCGACAAAATTACTACGGGGAC 37647 28 100.0 33 ............................ CCTTTATGGACTTGGTTCACAATGTTAGGAAGA 37586 28 100.0 33 ............................ TTGGCATAAGCCACGTGGAAATATGGTGTCCGA 37525 28 100.0 33 ............................ TAACGATCCATTTATTTGCTTCAGAGTCCGGAG 37464 28 100.0 33 ............................ TTTTTGCATTTTTATTGTCTCCTTTTTTGTTTA 37403 28 100.0 33 ............................ TGCAACTAAAACGCAAAAACGAACGGCGTTGCG 37342 28 100.0 33 ............................ TATTGTGATCATTTGTTAGATGGTATGGAATAA 37281 28 100.0 33 ............................ TGCTAGGCCTTTTTTTGCATGTCTTGCTATCTT 37220 28 100.0 33 ............................ TAAAAATCAAGGGCGGGCGGGTTGGAAAAAGTA 37159 28 100.0 33 ............................ TGTCACGCATTAAGTGACGGTGAAGTTTGCCGA 37098 28 100.0 33 ............................ CCCAACCGCAGTTTGAAATTCCTCAAACGCTGG 37037 28 100.0 33 ............................ CAACCCGATAACAGCCCACGCAAGGCCTTCCCA 36976 28 100.0 33 ............................ TGTTCTCGTGGTTGTCTTTTGTGGTCGGTGATA 36915 28 100.0 33 ............................ TAGTTACAGCGGTAGGCCCTAACGGGGATCTTG 36854 28 100.0 33 ............................ TAAAAAATGAAAACTTTTAAAGATTATGTAACA 36793 28 100.0 33 ............................ TACTCCTCGAACATGGATGTAATTACGATCCAT 36732 28 100.0 33 ............................ CAAAGCAAGACAAGACAAAGCAAGACATGCAAG 36671 28 100.0 33 ............................ TTCTTGGCGACTCTGAAGCTGATCGACTCTCTT 36610 28 100.0 33 ............................ GACCTGGTTTTGAGCGTTCAAGATGAAATTTAG 36549 28 100.0 33 ............................ TTATATCATAAAAATCATTTGACAACACAAAAT 36488 28 100.0 33 ............................ CGTCGACTGTGTCATCATGGTGCGGCCAACCAT 36427 28 100.0 33 ............................ CTTCTTCATCTACGGGGCCACGATGTCTGGAAA 36366 28 100.0 33 ............................ TCGTTGAAGACTGTGAAATCTTCCGGAACTTGG 36305 28 100.0 33 ............................ TGTTGACCGCCACGAAGGCGGTGACGGCATGGA 36244 28 100.0 33 ............................ CGTTTAGAAACCCAAAGGAGGAACAATAATGAT 36183 28 100.0 33 ............................ TTACACACCGCAAGAAAAACAGCTAAAGTCAGT 36122 28 100.0 33 ............................ TACGGGCAAACGGCTTTCACGTACTATAGAGAG 36061 28 100.0 33 ............................ TAGTAACATCAACCAAACTCAAAAGCAAGCCCC 36000 28 100.0 33 ............................ CTAGCGCTAAGACTTGGAACGGGTCGGCTTGGG 35939 28 100.0 33 ............................ CTGTCTTCCAATGAGAATCATAACTAAAAATAT 35878 28 100.0 33 ............................ TAGATTTCAGAGTTTAGTTTGTTGCCGACCTCA 35817 28 100.0 33 ............................ TAAAGAAATTGAACAGAATAAAATTCAAACTGG 35756 28 100.0 33 ............................ TGTCTGGGTATTTGATGCTACAACACACAAGCT 35695 28 100.0 33 ............................ TAATCACGCGCTTTGATGAATTTGACTTGTCAA 35634 28 100.0 33 ............................ TTGCAGTCGGGATGTTCAAGCACTCCATCAAAG 35573 28 100.0 33 ............................ CCATTGATCCCGCCAAGTTCTTAAAGCTATCCG 35512 28 100.0 33 ............................ TGTCGTGCAACAAATCCACGACATGAACTCGGG 35451 28 100.0 33 ............................ TGAACTCTTGATTGTGCTGCAAGGCGCTAACAA 35390 28 100.0 33 ............................ TCTATATTCCTAAGGGCGAAGTCAAGGTGCCGG 35329 28 100.0 33 ............................ TAATTCCGCCGATTTCGTGCTTTAAGGTGTCGA 35268 28 100.0 33 ............................ CAAGATCACGGTTAAGAATGCGCAGAATATACC 35207 28 100.0 33 ............................ TGCTTTCGACACGATCAAGACATCGATTTCAAA 35146 28 100.0 33 ............................ CTTGGGAGATCCCTTCGTAGTTAGCTGGTGAAT 35085 28 100.0 33 ............................ CTAAACTAAGGAGAAAAAAATATGGCATATAGT 35024 28 100.0 33 ............................ TCGTCTCTTGGCTCACAAGATCACCTCCTAGTT 34963 28 100.0 33 ............................ TTGATCGCCTCGTTACGGAATTCGGTAGCCAGG 34902 28 100.0 33 ............................ TTGTCACTGGGGTAACGCCAGCGCCAAACGATG 34841 28 100.0 33 ............................ TTGGTGGGTGGCAATTGGTCAGATGAAGTTCCG 34780 28 100.0 33 ............................ TGTTGACGCTCCAACGATTACGATTAAACTAAA 34719 28 100.0 33 ............................ TGATGTCAAGCGGACTAGCCATGTCACTAACCG 34658 28 100.0 33 ............................ TCTCTGGAATTGAGTCAAGCGTTGCATACACCA 34597 28 100.0 33 ............................ CGATCCGTACGACAGCAACTCCCGATTACACAA 34536 28 100.0 33 ............................ TGTTGAAGTAGTGCCGTCTGGGAAAGTAACCTT 34475 28 100.0 33 ............................ TGCGTTGAAAATTGCCTGAACGGTGCTGGTGCC 34414 28 100.0 33 ............................ CAGACGGCTAATGGTCTGACTAGCACGGTAAGC 34353 28 100.0 33 ............................ TTATTGCTGAAACCAGGCCACCAGGAGCTCATG 34292 28 100.0 33 ............................ AAATCGAGACTCCAATGCTTGCGGTAACAACAG 34231 28 100.0 33 ............................ TTGATTCTATTTTACGAAGTGAAGCTAGTGTTT 34170 28 100.0 33 ............................ GGAGATACCAAAAGCAGAAGCCAATTGGTACCG 34109 28 100.0 33 ............................ TATACTATAAACCTTACTCTCCCAAGGGATAAG 34048 28 100.0 33 ............................ TTATTGCTGAAACCAGGCCACCAGGAGCTCATG 33987 28 100.0 33 ............................ CAGAGTTTTTAAAATTCATTTTTTATTATCTCC 33926 28 100.0 33 ............................ TGAACTTGAACAATCGATAACCAGCTGGCCAAT 33865 28 100.0 33 ............................ CCGTCGACGTTATCCATATGACTAAGCACGCTA 33804 28 100.0 33 ............................ TAAGACTTATACTGTAGTGCTTTCAGACGGGAG 33743 28 100.0 33 ............................ CAAATTTATCTACTTTATCGAATTTAATGACCA 33682 28 100.0 33 ............................ TTTCAGAAAGAGCTTCATTTTACGGGGATTGGA 33621 28 100.0 33 ............................ TGACTACACCTCTTAGAAAGGGGGGTAAAAAAT 33560 28 100.0 33 ............................ TAAAAAACTCGTGAAAGCGTCCAATGCCTTCAC 33499 28 100.0 33 ............................ CGAGCACGGTTGACTTGCTGGCCGCTACGCTGT 33438 28 100.0 33 ............................ CCCCAAACATAGCGAAAGAGTTACCAGCGTTTG 33377 28 100.0 34 ............................ TAGCGTCCCGTACGTCTTCATCTTCGGACGTCCA 33315 28 100.0 33 ............................ CTTGCAAGACGGGCACGACTACAGCCAGGACAC 33254 28 100.0 33 ............................ TACAAGGCCAAAGTAGCGCAGAGTTTTCAGCGG 33193 28 100.0 33 ............................ TATCGTCACCAACTTTGCTCACGTTTATCGTGA 33132 28 100.0 33 ............................ TCGACTTCCCGTTTTCGTCCTGGCCCAGATAGA 33071 28 100.0 33 ............................ CGGTTGAGCTGATGACCGAAGCAAATGTTTACG 33010 28 100.0 33 ............................ TATAACCAAACTCATTTAAGGCCGTTGCTTCAA 32949 28 100.0 33 ............................ TGCGAGTTTGCGGATCGCTTTGAGTACTGGAAG 32888 28 96.4 0 A........................... | ========== ====== ====== ====== ============================ ================================== ================== 85 28 100.0 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAATAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : GTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGGTAATAGGGAAGGAGTGAGGAACAAGCGTGAGCATTTACGGAAAGTATGCCGACTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAGGAGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGTATGCCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGCTCATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //