Array 1 2236-2755 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFE01000025.1 Flavobacterium psychrophilum isolate 45-SE553_S11_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =================================================== ================== 2236 38 100.0 31 ...................................... ATTGAAAAAAGTACCATCTTCAATAGTAGTA 2305 38 100.0 51 ...................................... AGCTGAAAAACACCCCTTCCAATAGAAGTCACAGAATTAGGAATTGTAACT 2372 38 100.0 31 ...................................... AGAGTGCAAAAGCACCTCCATTAATAGTAGT 2442 38 100.0 31 ...................................... GTCTGCAAAAGACCCATCTCCAATAGAAGTC 2511 38 100.0 31 ...................................... ATTGAAAAAAGTACCATTTTTAATAGTAGTA 2580 38 100.0 31 ...................................... ATCTGCAAAAGCCCCATCTCCAATAGTAGTC 2649 38 97.4 31 ........................C............. GCCTACAAAAGCATACCTTCCAATAGAAGTT 2718 38 78.9 0 G.............A.....C.........TT.TTG.. | ========== ====== ====== ====== ====================================== =================================================== ================== 8 38 97.0 34 ACAGAATTAGGAATTGTAACTGATGTTAAACCAGAACA # Left flank : GAATTAAAATGACAAATAATAATTTTTTCATGTTTTTTGTTTTTAATTATTGTATAATAATTGTGTTTGTTGCCTTACCTTGGTTTGTCATTACTTCTACAAAGTAATTTCCTTTTGCAAAGCTTGAAACGTTTATTTCTGAATGATTAGTTGTTTTGATTAACTGCCCTAATGTGTTGTAAAAATTCACTTTTTGTAATTGTAAGCCCTCTTGCAAGGCTATGTTTAAAATTTCTGAAACAGGGTTTGGGTATATTTTTAGATTACTTTCTATCGCAAATGAATGATTAGAAAGTAAACCACCAGAAATAGGGCTGAAATTTCTCCAAACCGCGGCTGCCTGATAAGCGACTTGCGTACCAGTAGGAACATTTAAAGCACAGTTTGATTGAGTAATATTGCCGAAGACATTTGCATTAATAACTAAAGGGCTTGTAATATGGCAATTTACTGTCTTTAAACTTCTACAGCCTTCAAAAGCATCCTCTCCAATAGCAGTC # Right flank : AATATTCAAAAGCAGATTCTCCAATAGCAGTCACGGCGTAGTTTTCCGAATTATAAGCTACTGTTTCTGGTATTTCTGCTGCTCCAGTAAAATTAGCGTTTCTAGCTACCTTAACAGTAAAAGGAGCTGTTGAAGAAGTAATAGTATAATTTATACGGTTTGCTGTAAAATCTTGTGCTATTCCTAAAAAAGGAATTAAAATAAGAAATAATAATTTTTTCATGTTTTTTGTTTTTAATTAAAAAATTATGTGGTTTACAAAAGTAAGCTAGATTTAGAATAAATACAAATAATACTTTGTTTTTTTGAGATTGGTCTTTAAGTAGGTGTTGTTTCTATATGCCTGCAATTGTCTGATTTTGCTGTTCTTTTTGTTATATTTGGCTTTGCAAACGATTAATTAGGGACTAAAATTCATCAAAATATTGCTTAATGTTCTTTTTTTTATTTAGAAGCTTTTTTTGTATAATGTTATGAATAGAAAAAGGTTAGCCGTTCGA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACAGAATTAGGAATTGTAACTGATGTTAAACCAGAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 134-1844 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFE01000053.1 Flavobacterium psychrophilum isolate 45-SE553_S11_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 134 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 209 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 285 46 100.0 30 .............................................. AAAAAGAATATAAATTTATGCTAAAGAGAA 361 46 100.0 30 .............................................. AGCGATGGAAAATGCGCACGAGCTTACGCT 437 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 513 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 589 46 100.0 30 .............................................. ATTTAATGTAATTGTACCCGAACTAGCTCT 665 46 100.0 30 .............................................. TATATCCGTGTTTGAATACAGAGTGCCACC 741 46 100.0 28 .............................................. CGATTTCGCACTGAAATGAAAGTACTAT 815 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 891 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 967 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 1043 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 1119 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 1194 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 1270 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 1346 46 100.0 28 .............................................. AAAACGAATACATACAGCGCACGCATTC 1420 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 1496 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 1571 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 1647 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 1723 46 100.0 30 .............................................. ACCAAAGTTTAGGACAGCCCGAAGGCTTCG 1799 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 23 46 98.6 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : AAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAAAT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //