Array 1 120759-121519 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCLO010000011.1 Eubacterium limosum strain DFI.6.107 IMADOJIF_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 120759 30 100.0 35 .............................. TGAATAATAACCCCATACTGATCTCGTAATACTTT 120824 30 100.0 34 .............................. CCACAACCGAAGCCACGCAAAGCGTTGACGGTGA 120888 30 100.0 36 .............................. TCAATAATGGAACCAACAACTTTTTTATCCATAACA 120954 30 100.0 36 .............................. TGTTGAGCACATAACCAATAGGCCAACGATGTTTTC 121020 30 100.0 36 .............................. TCCATAGGCGGTTTCATCGGCTGCCCGTTTTGGTGC 121086 30 100.0 38 .............................. ATTGGTCTTCTGGAAGCTCATCCCCGCTCTCTTTCTTA 121154 30 100.0 36 .............................. TGCTTTTACGCTTTCTAATTAAATCGGTGGCCTTTC 121220 30 100.0 36 .............................. TTCTTGGTACGTTCTTCCGTTGGAGTGTTTCCGTTA 121286 30 100.0 36 .............................. GGACGTATCCTTTTACCGCCGGATATGAACGCTAAG 121352 30 100.0 38 .............................. ATATGTGATGCTCGGTTTTGCCATGGGTACGGGTTTAT 121420 30 96.7 35 .................T............ TTGCTTTAAACATTTTATTGTCTCTTTTTCGTTTC 121485 30 90.0 0 .................T....T......C | TCGCC [121506] ========== ====== ====== ====== ============================== ====================================== ================== 12 30 98.9 36 GTTGAAGATTAACATGAGATGTATTTAAAT # Left flank : ACGCATTAAGAATCATAGGCAGGTCTCCTGACTTACGGATTAACATGAACCGACGCCTTCCCTTTCAGTGGCACTTGCCGGTCACTACCGCTTACAGTGATGGGTTCGCTCAGGACTTTCACCTGATTCCCTATTCTCCCCTTACGGGGCACCATATCATTCATAAATATTAACTTGATTTTTATTATAACGGCATTTTTTTCTTTTTGCAAGCGTTATCTGCAATTTTTTGTGTACTATAAAAAATCCATTTCAAGAAAAGTCCATAGGGAGTTGCCCTCAGGGGGCTTTGCGCGTATAATTTTATTATGAGAAAGATTTAAGAATTTCCCAGGCATCTTTTGGTGCAGATGGGTAAAAGGAACCGTAAGTAAAGGCTTTGGAAAGAAAATGGGATGAAAATATTATAAACCTTAACGGCTTGGTAAAAATGACAAAAAATGGCTAAGCCAAAGGGATTGGAAGGTATTCGTTAATTTAAGATTGGCTTGATTGCTATG # Right flank : CAACAATATACAGAGCTTTTCAAACTGTATTTTGCGAATGTTAAGTATTGTTTTACTGGCTATCGTAATGTTAGTGTTCTATAAGGGAGTTTACGAAGCAGAGGTGTAGCTTGGGCTGGTTTTAAGCATATTATCGGATAATGGATAAAAAGATGAGGAGGGAAGTGCATGCTTTCGAGGGAAGTTTTTCTGGAGAAATTGAGAAGAGAAATTGAGGCAGAGAATCATTTGATTGCCGTCGCGTCTGGAACGGGGCTGACGGCAAAATACGCGATTCAGGGTGGCGCTGATTTTCTTCTGGCGCTGAACTCAGGCATTTTCCGCGGGATGGGACGCGGTTCTCTTGGCGGACTTTTGCCCTATGCCAACAGCAATGATATGGTTTATGAGTTTGGTATTCGGGAGCTTATTCCGCTGGTAGGTGATTTTCCAGTGGTATTTGGCCTGAACGCCACAGATCCCACAAGGGATATGGCTGCTTATCTCGATGAAATCAGGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 77702-78638 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCLO010000019.1 Eubacterium limosum strain DFI.6.107 IMADOJIF_19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 77702 30 100.0 36 .............................. AACCCAAAGTCCATACCAATCTTCTTATTATCTCGT 77768 30 100.0 36 .............................. TCTACTTTTTCATATACGACTGTATAACTGTAAAAA 77834 30 100.0 37 .............................. TTACCATAATGGCTTAATAAATACCATATCGTCACCA 77901 30 100.0 36 .............................. ACGCCATAATAATAAAAGCATCGTGCAAATACGATG 77967 30 100.0 36 .............................. TAGTTTTTGACAGGCAGCCCAGCCGATCAGCTGCAT 78033 30 100.0 36 .............................. TGAAGCTTTTAAGCTGATGCGCCAGGAAGATCTGCC 78099 30 100.0 36 .............................. CCTAAAATACCCATTGTTTTAAGCCCTAACATATCA 78165 30 100.0 35 .............................. TAGACCAAGGTATCCGATGAAACTGCTTTTGTGAC 78230 30 100.0 37 .............................. GGTTGTTGTTATAGCACCAGTTTGCAATGGAGTTTGT 78297 30 100.0 35 .............................. ACAACACCGACAGTTCTGTTAGTAAAAGTATAGGT 78362 30 100.0 36 .............................. AAGCGATGCGGACGTTTTTCTAAGTGGACACCAAAC 78428 30 100.0 34 .............................. ATTCAAAGAAAAAGGGTGGGTATCGCATCAGGCC 78492 30 100.0 35 .............................. TCAATTTTCTTTTCCATGGCCTGTTCAGCCGTGGT 78557 30 86.7 22 .........................G.CTG CGATGTAAGGCACTATAGGAAA Deletion [78609] 78609 30 70.0 0 ........A...T.AA..C.A......TCA | ========== ====== ====== ====== ============================== ===================================== ================== 15 30 97.1 35 GTTGAAGATTAACATGAGATGTATTTAAAT # Left flank : TTTATCCCCTTTAATATGGGAGAAAAGCTATGAGTGCAAATAAAAAATTTAATTATAATTATGCCTTCGTGTTTTATGATGTCAATGAAAAGCGTGTGGCTAAAATTTTTAAAATTTGCAAAAAATATCTTGTGCATTATCAGAAATCTGTATTCAGAGGAGACATAACCCCTTCAAAATTGATTGCCCTGAAAAACGAACTGAAAAAAATTATTGTCGAAGATGAAGACTTCATCTGTATTGTAAAACTGCTGAATGGAAATGTCTTTGGAGAAGAAGTCATGGGCATCTCCGAATCCTCAGAAGACCTTTTTCTGTAGCCCTGTTTTACCAGGCGCAGAAAAGTTTAGAAGGCCAGAATCCTTTTAAACAAAAGGTTTGAGCACCATTTGAAAGAAGAATTGACGAAAATCTCTGCGGCTGGTAAATTTGTAGAGAAATGGCTTGAAATCAAGGGTCTTAGAGAATATAAATAGAGGAAGAATGGCTTGATTGTTATG # Right flank : AACATAAAAATAAAAACCGCCAGCATATGCTGGCGGTATAAAAAGCTTTTATTCTTCATCGACATTCTCGAACAAAGTCTCCTCATGTTCGCCGTAGAGGCTGTCCAGCTCCTCATTAAGCAGCTGGTTTGCGAGGATAACTTCTTTAATTTTCTGGACTAGGCCAGAGGCTGTCAGCAGGCAGGCTGGGATGATGATAAACCAGAACATGTGAAACATACTGACTTCGCCGCCGGTAAAGAAGGTGTATATCAGTCCACCAAAGCATCCGAGCATGATGACAACAGTCACGATAAGGGTAGCGTTGAAGGACATATCCATGGTCAGGGCCACAAAAATGCACAGAACAAAAAGAATCAGGTAGTCCATAGCAATAAAACGTCCCGAGGACAGGGCAGTAAATACCCCCATGCCTAGCATGGCAATAACAAATAAAATCAGGCGCAAGGAAACGGCGGAATATTTAAAGGCGCCGAGGGAAACGGCATCAACGTTTTCGT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //