Array 1 49297-50899 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGLJ010000001.1 Peptoniphilus stercorisuis strain DSM 27563 Ga0454143_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 49297 33 100.0 36 ................................. ACCCTTGATACATCTAAATCATCACGACCATATAAA 49366 33 100.0 34 ................................. GAATAATTGCCTGTGTCATGAATTACTATATACT 49433 33 100.0 36 ................................. ACAAGAAAATGAGCCTTTAAATATGAAAAATGGAGA 49502 33 100.0 36 ................................. GGAATATATGGAAAGAAAATAAATGAAGATGGTACA 49571 33 100.0 34 ................................. TTGGCAGGAATTGAAACTTGCTCGAAAACTGCTT 49638 33 100.0 36 ................................. AAGAACTCTCTTGCAGTTGTAACACTACAATTTGAT 49707 33 100.0 36 ................................. GACCACTTAGCCATATCCAAGAACCGACTAACTCAA 49776 33 100.0 34 ................................. ATTACCTCCTGGATTTTCTTTCTATATTCTTCAA 49843 33 100.0 36 ................................. ACAAGTAAGATCTAAGACTAAAGCAGAAACTGAAAG 49912 33 100.0 35 ................................. GTTTTACCTTGCACATCTCCCAACTCTCTTATTAT 49980 33 100.0 36 ................................. ATTAAAAAAATAGTTGACAAAAATTAAAAAAAAAGA 50049 33 100.0 34 ................................. AGTTCTTCTATTTCTGATGCTGTGAATTCTGTTC 50116 33 100.0 34 ................................. AAATAATTTTCTACCATTTCAACAGTAAATACAA 50183 33 100.0 34 ................................. GTAGAAGGTCGCTCTATGGATTGGTATAGTATGC 50250 33 100.0 35 ................................. CTATTTCATTTTTTGGTATAACTAGATTTTCTGGT 50318 33 100.0 36 ................................. ACGACTTTATAATTGTTTTTCTTTCTTATTACTTCT 50387 33 97.0 34 ................................T AAACTCATGAGTAACGAAGTTAAGATGGCAACAC 50454 33 100.0 37 ................................. GTTGCACTCCCAACGTTCAGCAAGTTGTTTAGTAGTT 50524 33 100.0 34 ................................. ATTTAAAGATATAAGGGAGTTAGAATTTGCCCCA 50591 33 100.0 37 ................................. AATCTAAAGGCCGTACTACAAGCATTAGGATTTGATA 50661 33 100.0 35 ................................. TAAACACTACACATATGATAGTAATTGTTACTATT 50729 33 100.0 36 ................................. AATAGGTTTACTAGGAATTTTCTCTTGTACCCATAC 50798 33 100.0 36 ................................. AAGAGTTATGCCATAATCAAAACCTGTTGCGTTGTT 50867 33 97.0 0 ................................T | ========== ====== ====== ====== ================================= ===================================== ================== 24 33 99.8 35 ATCGCACCCTCACAAGGGTGCGTGGATTGAAAC # Left flank : ATCAATGTTATTAGCAAGAAGTATCAGAGGAGACTTAGAATTATATCCTCCTTTTTTATGGAAGTGAAAAAATGTATATTTTAATAACTTATGATGTAAGTACAAAAGATAAAAATGGAGCTAAAAGATTAAGACAAGTTGCAAAATACTGTCAAAATTATGGTCAGAGAATACAAAACTCAGTATTTAAATGTAAAATTGAAAACTATATGCTTCCATCAATTGAAAATGACCTTAAAAACTTAATGGACTTAAAAAAAGATAATATTAAGATATTTAAACTTGGAAAAAATATAGATAGTAAAATAATATCCTTAGGTAAAAATACTGAATATGATATAGAAGATATACTAATCTTTTAGTGCGAAAGTATATTAAACATAAAACACCTATAAGCTTCGCGCAAAAAACGAAGAATATAGCATATAAATAGCTGGTTTTAATATTACTAAAAAGTATAAAAATAGAATTATACAGCCTAAACGGCTTAAAAACTAGTT # Right flank : TTATCTACTGTTAAGTTGATACTAGGGTTAAGAGATGTATGGATAGAAATGTGTGAGTTTAAGTATAAATTAACAAATGGTACTATATTTTTAATTTATATTATGTTAATATACAAGTATAAACAAACTATGTTTAATGTTCATAAAATTTTTAGAGAGGTTATTTCATATATAATGAAAACGTTTGTTTAAAATATTTTTTAGATTTTATATATTATATTTTAATTATATTATTTTAGTGTTTTTTAAGTGTATTATTTTATAAGATAAAATATTGTGTATTTTTAATGATGTTTTTCGTTTATGTATGATTTATTTTCATTATATTTGGAAAATAGTTTATTATTCATCTTTAAGAAGAACAAATATATTAAGATATGGAAGTATGTGTAATACTATGCTTTAATGTCATGATTTGAACATTATTAGTTTATATATTTTTTTATAAAATTTATAATTTAGGTGTTTATAAATTTATCATTATGCGTTACAATATGTAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCCTCACAAGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 21118-13189 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGLJ010000005.1 Peptoniphilus stercorisuis strain DSM 27563 Ga0454143_05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 21117 30 76.7 37 T....TT.....A..A....T.G....... AGCGAGGCGACCGAGTGAGATAAGTTTTGTCTCGCAA CG [21108] 21048 30 100.0 37 .............................. ACCACATAACAAAGCCTGAACAATCTATGCCTGTCTT 20981 30 100.0 36 .............................. TTGACTATCTAAGTCAACAATATAGTTTAGAAAAAT 20915 30 100.0 38 .............................. GTTGGTGTACTCTATTGTGCCACTCTCTACTAAGTGCC 20847 30 100.0 35 .............................. CACACTTAAGTAAATAATTTCTACCTTGTTTATCA 20782 30 100.0 37 .............................. TAACATATTTGCTATTTGCTCAGAATTGGAAAAGTCT 20715 30 100.0 38 .............................. AATAAGCCTTAATAAGTGCCTTAAATTGCCTTACAAAA 20647 30 100.0 37 .............................. GTGTCAGACCGAAATCTATAAGTCCTTGTGTTTTATC 20580 30 100.0 36 .............................. GTTTACTTAACAACTCAATCATTTGTGATAACTTTT 20514 30 100.0 39 .............................. TTTATCGCTATATTTATATTCTACTAATTCTGATTTACT 20445 30 100.0 37 .............................. CCGTCTTGGCACTGCTGCAGCAGGAAATCAGCCTAAA 20378 30 100.0 37 .............................. TGAACATATTTTAACTACTAAACAACTAGCAGAACGT 20311 30 100.0 37 .............................. AAATAAACACAATTAAAATCTATGCAGAAGATGAGAA 20244 30 100.0 36 .............................. GGAATTGAAACTTGCTTGAAAACTGCTTGATAGAGT 20178 30 100.0 36 .............................. CATTTTCATCTACTGTTACTATTAATTGAGTTCCAG 20112 30 100.0 36 .............................. TTGCTCATCTATTGCTAGTTCAGTATGTAAAGAGTT 20046 30 100.0 37 .............................. TCCATTGCTCACCTCTTCCTAATATATAAAAAAGAGC 19979 30 100.0 39 .............................. AAGAGACTCTGAAGGTAATGTAGTGATGAAAACTTACAA 19910 30 100.0 38 .............................. GAAGAATCTGTACGATCAGTGAGAGTGAAATCTTATCA 19842 30 100.0 38 .............................. ATTTGATTTCCGACTCCGCCACCGAATAAACTTATAAA 19774 30 100.0 37 .............................. GGAATTGAAACTTGCTTGAAAACTGCTTGATAGAGTA 19707 30 100.0 38 .............................. ACAAAGCAATTAGAATTGTTAAGTTTGACTTCAAATTA 19639 30 100.0 35 .............................. TTTTCTCATTCATCACCTGAAACAGTGACTACAAA 19574 30 100.0 37 .............................. TAACATCACTACTTTCTAGAAAATAATAATCACTACT 19507 30 100.0 37 .............................. GGAGAATATTATGAGAGATTAAAGTTCTTATATAAAA 19440 30 100.0 36 .............................. TATATGTTACATTCATAGAGATAACCTCCTTTATTA 19374 30 100.0 36 .............................. ATACATATCTAACATAGCTTCTTGATAGTTTTTCAG 19308 30 100.0 39 .............................. TTACAAACGTGTTTCCCATCTATTTATCACCCCATTAGC 19239 30 100.0 38 .............................. ACTCAATAGATATCTTTCATCATACATATTTTGAATCA 19171 30 100.0 38 .............................. TGGTAGTAGGCTGTTTCTTACTAATGTTTAACGTATTC 19103 30 100.0 37 .............................. AACATGTGCAGATTGTGTGCAGAACGTTTAAAAAAAT 19036 30 100.0 37 .............................. CAGGAATATCTAGTGTAGAACCTATTTCAATATGATA 18969 30 100.0 35 .............................. TTAAGAAGTATGAGAGCGGCAGGTCTTGATACAAC 18904 30 100.0 37 .............................. TTACATCATCTGCTATGAGGTCAAATCCTAAACAGTT 18837 30 100.0 36 .............................. GTGTATCTGCCTTTACATTTTGTATCTTGTAATAAA 18771 30 100.0 37 .............................. GCAGGAATGAAGATATTAAATCCCCTTTTCCTGCACT 18704 30 100.0 37 .............................. GTAATCCATTCTAGACAAGTTCTAAAGACTATTGAAA 18637 30 100.0 37 .............................. TAGGAATACTCCCTCTAATGTTTTTAGTAATGTTTTT 18570 30 100.0 37 .............................. TTCAAATGAAAGATGATAAAGCAGAAGTAGTTGAAAA 18503 30 100.0 37 .............................. AGATTAAACCTTTTGTTAAACTCTGCCGCTATTTGTT 18436 30 100.0 38 .............................. ATATGTTCCTTACAACGGTGCGTCATACGGGCAAGAAT 18368 30 100.0 37 .............................. ATATGGAAGATATAAACAAAAGTGCAAGTGAAATAGT 18301 30 100.0 35 .............................. TTTGATGTGGGAGTATTCATATACTCAAAATTCAT 18236 30 100.0 37 .............................. CAATTGAAGATGAGACTATTCCTGCAAAGACATATTG 18169 30 100.0 38 .............................. CGTCTCCGCCTGCATTATCTAAATCTTCTTTAGTTCCT 18101 30 100.0 37 .............................. CCTGGTACATCAGGAAACAAATATCATTATATGCACT 18034 30 100.0 37 .............................. CAGAAGTTGGCTTAGCTAACGAATCCGGGATAGCAGA 17967 30 100.0 40 .............................. GAAGATCTTAACGATTTAAAAATAGTTAAAAATGGGCAGT 17897 30 100.0 36 .............................. CTAGAAGGACTTAATAAACAAATAATCATAATGACA 17831 30 100.0 37 .............................. TGGCTTTTAATAGATGCTCCGCTCCATTTTTAAATGG 17764 30 100.0 37 .............................. TCTAAGAAATGACTACAGCATCAAAGAGTGGAGAAGT 17697 30 100.0 37 .............................. AAAATGTCCTTGTTCATTACGATTAGACTCTCTAGTT 17630 30 100.0 36 .............................. ATTCCTGCCATAGATATGAAAGACTTGTGCATTATA 17564 30 100.0 38 .............................. AAAAGGAATTTAAAAATATCGGATTGGAGTTTTAAATA 17496 30 100.0 37 .............................. TGTTATATCGCCCCTATAACCATTGTCTACCGTTCCG 17429 30 100.0 36 .............................. CATAGCTTACTATCTAGACAAGATAGGAGAACAAGC 17363 30 100.0 36 .............................. TTTAGTTACAAACGCACTACCGCCAGTACCAGCAAT 17297 30 100.0 37 .............................. CTAATGCCCCAAACTTAACTATCATACTTTGAATGCT 17230 30 100.0 41 .............................. TCCAAGTATAGACCCAAACCATTTAGGAGGTGTATCAAGAG 17159 30 100.0 37 .............................. CATCTTCTGAGTATTCAAAATCATCTAACTTAACCTT 17092 30 100.0 36 .............................. AAGATAAGAGATAGAGAAGAACTAGAAGAAAAGAAA 17026 30 100.0 37 .............................. GAAATGTTAGTAGCAGAGTGTATCTTATTTCAATATG 16959 30 100.0 37 .............................. GAAGAGATTGCAACATTATTACTTAACTATGGAATAT 16892 30 100.0 36 .............................. CTAAAGACTTTTCAGGTGAAGAAAAACTATATTGTG 16826 30 100.0 36 .............................. TCTTCGTAAGGTTGGTCCTTAAATTCTTCATAGAAT 16760 30 100.0 38 .............................. ACAAATAGATGTTTCAAGACCGGGATTAAAAAAGATAG 16692 30 100.0 37 .............................. TATGACAATATAGATCTCTTTGTATGCAATTCATGCA 16625 30 100.0 37 .............................. CCAACCAGAGGGAATATGGTTACAACTTCTGTGAAGG 16558 30 100.0 36 .............................. AAAAAACAAGGTACGTAGATGAAGTATATAAACAGA 16492 30 100.0 37 .............................. TAAGTTGTACTTTGTTTTCCATCATTATTGAAAGTCT 16425 30 100.0 37 .............................. ATGGAAATTTCGAACTGTTTAAGAAAAGACAAGATGA 16358 30 100.0 37 .............................. GAGTTCATTTATATTTTAAAAAACCAACAGGATTTAG 16291 30 100.0 37 .............................. CAATAGCTTGAATTATACTTTGTAGTCCTTGTAATGC 16224 30 100.0 34 .............................. GTGAGCCTTGCGCAAGCTATTCACGAAAGTGGGT 16160 30 100.0 36 .............................. TAGCAACTGTTAAAGCAGTAGTTACTATTAATGATG 16094 30 100.0 36 .............................. AAGTATGACACTTGTTTATATTTTAGCGTTAGAAAT 16028 30 100.0 37 .............................. ATTGATTAGATTTTAGCAAATATGTCCCAAAAGGTTT 15961 30 100.0 37 .............................. AGTTTGATATTTACGAGTAATCATAGTATTAAATCGT 15894 30 100.0 34 .............................. ATGAACGAGAAGTAAACGAGATAAGTAGAAAGAA 15830 30 100.0 37 .............................. AAAACTTTGAGTAATACAATACGAAAAATAAAAGTTT 15763 30 100.0 37 .............................. CCATATCTCAAAAAATCAAATTCATTTAGTAACCAAC 15696 30 100.0 37 .............................. GCTACACTTAAGCCTATGATAACCCACGTCCAAGGAT 15629 30 100.0 36 .............................. CTTTATAAATTCTTTGTAATATTCTGAGATAGAAAT 15563 30 100.0 36 .............................. GCAACAATAGAAGAAATTATCATTATAAGTTAGCAA 15497 30 100.0 37 .............................. GTTCGACTGCTGCTATTGTACCTTATCATTTTGTACT 15430 30 100.0 37 .............................. ACACTTAAGACAGTACTAGGCTGTATGTGTGTAATGT 15363 30 100.0 37 .............................. GGGTCTAGACTGGAAAACTACCTACAAGGACATAACG 15296 30 100.0 37 .............................. ATACATTTCAGAAAAGGCATAACAGAACAAGAACAAA 15229 30 100.0 38 .............................. TGGAAAGAAGAGAAATACGTTCAAGCGTTGGTATATCA 15161 30 100.0 37 .............................. TACTTCAGTTATACAATATTAAGAAGATTTTATAGGT 15094 30 100.0 36 .............................. AAGAACTGCGACATTAGAACTTAAATCGGAAATAAC 15028 30 100.0 36 .............................. GACACAGCCGACTATGGAAGCGAAGATATGAGGCAT 14962 30 100.0 37 .............................. ACGAAGATTTAGCAGGAATAATTGACAACGAAATTAT 14895 30 100.0 37 .............................. AATTATATAGCCTTAGCAGGAATTGACGCAGATGATG 14828 30 100.0 37 .............................. CAGTATCAATTTGCATTTATCATTTACGCGGACTACT 14761 30 100.0 38 .............................. ACCAATAGAGCGTTTGAAAGTGGACTACCAACTAGCCT 14693 30 100.0 37 .............................. AATGGAAATAGGAGAAGAATTTGAAACTTCTTACGAG 14626 30 96.7 36 T............................. TGCAAGCAAAGACAACAGTATCAAAGAACGACTACA 14560 30 100.0 39 .............................. AAATGCTATAGATGCAGCTATTGCAACAGCTGCTACACT 14491 30 100.0 38 .............................. TTAAAGAAGAACTTAATATCCCAATGACACTAAAAGAA 14423 30 100.0 40 .............................. GGAATAAAACAGCAGAACTTATAGCGAACTACATGAAAAA 14353 30 100.0 37 .............................. CCGGCATTGTACACATTATTCTTTCTTCTCTCCAATA 14286 30 100.0 36 .............................. TTCTGAAAAGTCCTCTAAAAGCATTTCCAGAGTAAA 14220 30 100.0 36 .............................. GCAGGAAAGACAGAATATAAGAAAGCTTATAGAAAG 14154 30 100.0 38 .............................. AGATGCAACAAGAGAAATAGTAATAGTGGACTTCACAG 14086 30 100.0 37 .............................. AAATCAACCAACAGCAGATTTTATTTCCTGCACAGCT 14019 30 100.0 36 .............................. GGTCATGGCGAAAGATGTAGGACAGCCTATAACACA 13953 30 100.0 37 .............................. TAAGTAACCTATAAGGGGGTGAGCATATGGCAAGTGA 13886 30 100.0 37 .............................. GATAGTTATATTTATTCGTTAGGCAACAAGAATTTGC 13819 30 100.0 37 .............................. AATTCAAGATGCTGATGAGCAATATTCAAGGATATTA 13752 30 100.0 36 .............................. GAGGAATAACAGGCTTTGGATCAAGTGGAAAGTTTT 13686 30 100.0 37 .............................. TCATTTATGACCGTGACGGTATCAAAGAATTGAAAAA 13619 30 100.0 37 .............................. TCTTCAAATTTTTTATATACATCTTTTTCTTCTTCTT 13552 30 100.0 36 .............................. TAGATAGACTTATAATTAAAAACTTTAAGGGAGTTA 13486 30 100.0 36 .............................. AAACTGATAACTTATTAAACACACCAATGGTATACG 13420 30 100.0 37 .............................. AAGGCTTATATTAGTATTGTAAGATAGTTAGACATAT 13353 30 100.0 38 .............................. AAAAATACAAATACCAAATTATATAAATGCCCAAGCTG 13285 30 100.0 37 .............................. AGTTAGGTATTAATTTAACAGACTTAGCAAGTTCAAT 13218 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 119 30 99.8 37 CTTTACATTCTAGTTTAGTTCTATTAAATG # Left flank : TTATATATCTACCAAGTTTTGTAAAGACTCTACCTCTTCTAGCATCTTCTTTACCTTTTTTATTTTTAATGTTATTCCACTTTGAGTGACCTGACATTAGTTCACGCACCTTTCTATAATTTTGAACCTTTATTTTATCACAAAATAGGTTTATATGCATATTCTATTATAATCACTATGAGCAATATTATAAAGGATTTTAACTAAAATTAATTAATTACAAAAAACTTAATTAAACTACACTTTTATGATATAATTTAAAAATACATAAACGAGGTGAAATATGAAAGAAAAATTAGAACACAACAAAGGATATATTATTAAAACAGACCATGGATTACTTGAAATATCCTATTGGAATCAAAATAAAATAAGATTTGAATCAAATACATCACGAGGTCCAAACTTCTGTTATCCACATCATGTAGTAGGAGTTATGAAATTAGAAGACTTAAAATTTAATGAAATAGAATATTAAAAGCTACCCTTTTGAGTAGCTT # Right flank : CCTGTCTCTTATAAGAGTTGATTTTACAGGCTTGTTTCTTCATACTTTGTCTACCTATGAATATTTTTAATAAATTTAGTTTTATAAAAAGTATTTCTCTAAAATATTCGTATATAATGTTAATTTTAAGCCATTTGTCGATTCCTTATACATTTTACTATATTAGAAGTCGACAATTAAAAAAAGTTTGATGTTTTGTCATCTGTTTTTCCTAAAAATTCTTTTTCAGTCCATTTTTCTGATCTACTTTTAAATACAACTACTGAATCTTTATTTTTTCTAATATACTCATTAAGTTCAAATTTCAACTCTAAATACTGAGATATAGTTAAGTTTCCTTCAAATACAGATTTTTGTATATTCGTTAAATATTTTTTACAAGTTTTAAAAATATTTCTTGATACATATGGACCTTTTTCATCTGAAATTATATCATATATCAATAATATATACATGTTTACACCTCTTATTTACCACCAAAACTTAAAACTTTCATATTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACATTCTAGTTTAGTTCTATTAAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //