Array 1 56368-56866 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHZS01000104.1 Gluconobacter thailandicus strain LMG 23137 LMG23137_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 56368 29 100.0 32 ............................. CCAATACGCACGCCCTTCTTCGTCTTCCGATA 56429 29 100.0 32 ............................. TCATTGGGCAGAACTGAGACCTGCAAAGGAAG 56490 29 100.0 32 ............................. ATAGGAGTCATCCAATCTAGCGCCATTCCTGC 56551 29 100.0 32 ............................. ATGAAAACACCAACGATCAAAACGCCAATTCA 56612 29 100.0 32 ............................. GTCCATAACGCTAAAGCCCGCTTTCTGGCATC 56673 29 100.0 32 ............................. ACGCCGGCAGCCGTGTAGCCGGTCAGAGCAAT 56734 29 100.0 32 ............................. GACGGCATTTTTCAGAAGCACGCGCGCATCAT 56795 29 93.1 14 ................T........G... CGTGGGTCTCCGGC Deletion [56838] 56838 29 79.3 0 ...........G.AA.......C...GG. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 96.9 30 GTGTTCCCCGCATGTGCGGGGATGAACCG # Left flank : TCGGGAACTGCGCGTCCCGTTCCGGACGGCTCATCATGTCACGGGGCGTCTGGTCGGACTGGCCGAGCAGCGCGGTTGTGATCTGGCGGATCTGTCCCTTGAGGACATGCAGGCCGTAGAGCCGGGAATCAATGCTGGTATTTTCGATGTTCTGACGGTTGAATCCTCACTGGCTTCCCGCACCAGTCTGGGCGGAACTGCTCCGTCCAACGTGCGCCAGCAGGCTCAGGCCTGGCTGGAGAAACTTGGAGACGCTGCATGAAACGTTTTCTGCTTGTTGGCCTGACCCTCGTAGCGCTCAGCACTGGCCTGAGCGCTTGCGGGAAGAAAGGGGCGCCACATGCACCCGGCCCCGCTTCCGACATCACCTATCCCCGGAGTTATCCGCCTGAATAACGGGCTTTCAGATAAGTCTTACAGGGGCCGAAAACAGGCCATAAAAATCGGTAGATTTTTGAGGGTGGAATTTTCCCTTTTCTGTCAGTACCTTGCCAGGAAGA # Right flank : GACTACTGGTGGCCGCAACTTCGATCTCGCCAAATAGTCCTCGCCTACTCGGGCGTGGATCTACCGCGAGAAGCGATTCCACTTTCTTCAGCCTCAGCGTTTTTCTGAAAACTCTACAGATGCAACAGCCGCCATCAGCTGTCCGCCAGAGCCTGGACTACCAGCGGGTGCGTCAGAACGTTTTCTGCAGGCCAGCCCATCGCCCTGAGCGCTCGAACCCCCTCTGCACCATCCCTTTTGGAAAGCTTCTTTCCGCTCTCATCCAGAATAAGAGCGTGATGCCTGTACTCAGGTTCAGGCCATTTCATCAGGGTCTGAATTACACGATGAATGGATGTCGCAGCGTAAAGGTCCTGCCCTCTCGTGATGCAGGTCACGCCCTGAAGGGCATCATCGTGGGTGACGCACAGATGATAAGACATGCCCGTATCTCTGCGTCCCAGAACAATATCACCAAATTCATCCGCACGCCCCGCAATCCGACCATGACCCGCTTCATA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.19, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 130889-131466 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHZS01000104.1 Gluconobacter thailandicus strain LMG 23137 LMG23137_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 130889 29 100.0 32 ............................. GCCAAACAAGCCCACTTTATACCCTTCTGTTT 130950 29 100.0 32 ............................. GCCTTCTTAACCTTCACGTGGTTTTCGACAAG 131011 29 100.0 32 ............................. CACTGCCAGTTCTCCAGTTCGATCAGCTCGCC 131072 29 100.0 32 ............................. GCTGCGATCGCCTGCGTCAGAATCGTGCCAAC 131133 29 100.0 32 ............................. ACAGGCGATAACGATAACGGCACGATCCTGCT 131194 29 100.0 32 ............................. GATAGTCTGGCTGTGACAGGATCGATCGGCAT 131255 29 100.0 32 ............................. GCGGAGTTCGCTCGCCGCCAGCAGGATACCAC 131316 29 100.0 32 ............................. CAGGTAGATTTTCCACTGTAACTGCCATTCTG 131377 29 100.0 32 ............................. TAGCCCGGAAATCCCATGCGGTTGATGACATC 131438 29 79.3 0 .......T...........A.G.A..T.T | ========== ====== ====== ====== ============================= ================================ ================== 10 29 97.9 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CGCCTCGTCCCCATGATCGAAGATGTTCTCTCCGCAGGAGGCCTGTCACCCCCTGAAGCACCGGAAGAAGCCATGCCTGTGGCCTTTGAAGACCCGGAAGGATTGGCCGATGCTGGTCATCGTGGTTGAAAACGCTCCACCGCGACTGCGAGGGCGGCTCGCCGTCTGGCTGCTGGAGATCCGCGCAGGAGTATATGTCGGTACCTATGGCCGAAAAGTACGCGAGATGATCTGGCAGCAGGTCTGCGCCTATATTGAACAGGGAAACGCTGTCATCGCATGGGCTGCTCCCAATGACGCAGGCTTCGAGTTCGACACCTGCGGCGCCAACAGACGATGCCCCGTGGACCTTGACGGATTTCGTCTGGTCGAGTTCGGTCCAGAAGCTGCCCTCCCCCTCCTGCCCGGCCCCCTCAATTCACCACGAAACCGACGCTGAAAAATCGGTAGCTTTTTGAAGTGGAAGATTTGCACCCATAATCATATACTTACAAACAAGG # Right flank : TTTACCGTCAGGCTTCTGAGCCCTGCACAACCGCACTCATTCTCCCAACATTCTTGCACACAAGGAGACAGATCATGAGCAAGCTCAGTAAAGAGGAACGGGACAGCCTGCCTGACAGGGAATTCGGGCTTCCTGAAAAACGGGCCTATCCCGTCGATACAAAGGCCAGGGCACGGAATGCGAAAGCCCGTGCCACGCAGGAGATGGAACGGGGGCTGCTGACACCGGAAGAACGGGATGAGATTGACCGGGCAGCAGATCGTAAACTGAACAAAGACTAAGCCAGAATCAGAAACGGCCCCGGATCACTCCGAGGCCGTTTCATCATTCAATTCCGCAGTCAGTGAGCCTGCGCTGCCCGCAATGGAGCATCTGCCGGAACATCCTTGAGCGGAATGCCCTGATACTTGCCCGTCAGGGTCTTCAGGAACGCAACGATGTCTGCAACATCCTGATCACTGATATCATGATCGGGCGTTTCGTAACGCGCCATGGCACGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //