Array 1 1172418-1173728 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056701.1 Klebsiella grimontii strain RHBSTW-00577 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1172418 29 100.0 32 ............................. ACCGATTCCCGGAAAACATCGATGGGGAGGGC 1172479 29 100.0 32 ............................. CGGTAAACCGAGGCGATCACGCATTGCCTCTT 1172540 29 100.0 32 ............................. GGATTAAGCTGATTCTGGCTGACAGAACAACG 1172601 29 100.0 32 ............................. GCTTAATACCAGAGTATGGTAATAAATCCGAT 1172662 29 100.0 32 ............................. CCGCCTACCACATCTTTCACGTTGGCCGGAGT 1172723 29 100.0 32 ............................. CCGTCAGGCTGCATTTGAAAAGTTGGAGCGCG 1172784 29 100.0 32 ............................. ACCAGGTGACTGCGGATAGCCAGTCAGGCAGT 1172845 29 100.0 32 ............................. CTCAAAACCGTGTCAACAAAAAAAGTGGAAAT 1172906 29 100.0 32 ............................. AATGCGGGCCCGTGGGTTCTGGCTCAGGATGT 1172967 29 100.0 32 ............................. CCGACACCTACAGTGAGGTGCGTCCTGCGCAG 1173028 29 100.0 32 ............................. TCGGTTGCCGTCTGAATATCAGTAGCAGAACG 1173089 29 100.0 32 ............................. ACACGATACGACTCACCAGGTGAAACGGGTAT 1173150 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 1173211 29 100.0 32 ............................. CCACCGGTCTATATTTCAGCTGATTATGACAT 1173272 29 100.0 32 ............................. ATAGTTTTGTGGGTGCTAACAGTATTCCGGGA 1173333 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 1173394 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 1173455 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 1173516 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 1173577 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 1173638 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTTTGCGAAT 1173700 29 86.2 0 ............TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 22 29 99.2 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : ACCTTTGCAGAAAAAAGCGCTTGAACTGGATATTGATAAAGAAGGTCCACAATTATTTATTCTTGAAGATGTGACTGGCGCTGGAAAAACGGAGGCCGCGTTGATTTTGACGCATCGTCTGATGGCTACTGGAAAGGCGCAGGGGCTCTATTTTGGTCTGCCGACGATGGCGACGGCGAATGCCATGTTCGATCGTATGTCGGAGAGCTGGCTAGCGCTGTATCAACCGGGTTCTCGGCCAAGTCTTGTCCTGGCTCATAGCGCGCGTGGATTAATGGATCGTTTCACGCAGTCTCTCTGGTCGGGAGATTTATCAGGTTCAGAAGAGCCTGACGATCTTCTGCCTTCCAGCCAGGGGTGTGCCGCCTGGTTTGCCGACAGTAATAAAAAAGCGCTGTTAGCTGAAGTGGGCGTTGGTACGCTTGATCAGGCAATGATGGCGGTGATGCCGTTTAAACACAGTAATTTACGGATGCTGGGGCTGAGCCATAAAATTCTGT # Right flank : GGTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTTATTATTTAGTGTGGCAAAGTCCAGTTCGAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1812043-1813109 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056701.1 Klebsiella grimontii strain RHBSTW-00577 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1812043 29 100.0 32 ............................. CTGGCGAGTGGACTGATAATGGTGCTTCTATC 1812104 29 100.0 32 ............................. GCACCCTGTATCCCGCGCGGTGGGTAACGTTA 1812165 29 100.0 32 ............................. CGATTGATAAATCCGCTCACACGTCACCCCGG 1812226 29 100.0 32 ............................. ATTCCGGTACCGCATTTTCTGGCCTGCCGGAC 1812287 29 100.0 32 ............................. TCGACGATGACAACGATGATGATGAAGATGAG 1812348 29 100.0 32 ............................. CTCGTTCCCGTATTCGCGACAGAGGGCATTCG 1812409 29 100.0 32 ............................. CTTATCGGTAGCGCACAAGCGGCGCTCTACAC 1812470 29 100.0 32 ............................. TCCTCGATACAGCCTGGCCGCGATACCGTTAT 1812531 29 100.0 32 ............................. GTGTCTCCATCCATAAGAACGAAGTGAGTGAC 1812592 29 100.0 32 ............................. CAACCTGGACGCTGCAATGGATATTCACGCTG 1812653 29 100.0 32 ............................. GGAGCATTTAAAAATCTGCTGCTGCACGCGCC 1812714 29 100.0 33 ............................. AAATCCGCAGCCGCCGCGAAGTCGTTCGCGTGT 1812776 29 100.0 32 ............................. GTCCATGATGTTGTGTTTTTTCACCCAGCTGA 1812837 29 100.0 32 ............................. GTGATATCCCTTACCCAGGCTTCAAAAAGTTG 1812898 29 100.0 32 ............................. TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 1812959 29 100.0 32 ............................. GACTTATAGCCATCGCCCATGTCGAATACCCA 1813020 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 1813081 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 18 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTCTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAAAATCAATTTGTTGCAAAAATGTTGGTAGATTGTTCTTGGCGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //