Array 1 211-1500 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNJX01000026.1 Granulicatella sp. zg-84 Scaffold25_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 211 36 100.0 30 .................................... AAGTTTCAAAGTCATCAATACGTTGTCGAG 277 36 100.0 30 .................................... CAATCGCACCTTTTATAATGTGTGATAGAT 343 36 100.0 30 .................................... TGAACACAAGGGATTAGTTCTACTATCTAA 409 36 100.0 30 .................................... AATCAAGTTCACTAGAACACTTCAAGAACT 475 36 100.0 30 .................................... ATATTAAACAATCTGAATGGTTTGTGTAGT 541 36 100.0 30 .................................... TTTATCATATTGTCATCTTCTTTCTATTTT 607 36 100.0 30 .................................... TTTATTCAAATATCTTGAAAGTGATGATTT 673 36 100.0 30 .................................... TAGGTATTCCAAAAGGTGATACGCATCAAT 739 36 100.0 30 .................................... CTAATGAAAAATATGAGAATCAAAACGCTT 805 36 100.0 30 .................................... CGGCGTAAAATCGATTCTAGCTTAAAATGT 871 36 100.0 30 .................................... TTTTTATTTCCTTTCTACCCAACTGATGAA 937 36 100.0 30 .................................... ATCACCTTCTGCATCGCCAATAACATCATC 1003 36 100.0 30 .................................... TAGTATTTGTTTCATAGGTGTGATGTGTTC 1069 36 100.0 30 .................................... TAGTATTTGTTTCATAGGTGTGATGTGTTC 1135 36 100.0 30 .................................... ATCTTTTGTGTTTGCTCGTTCTCTAATGAT 1201 36 100.0 30 .................................... GCTGACGTTATCCGATACAATCGAACAAAT 1267 36 100.0 30 .................................... AATACTAGGTGTCGTGATACACAATGACGC 1333 36 100.0 30 .................................... TGTTCTGCTAATATAGAATATTCACGCTCT 1399 36 100.0 30 .................................... GCAACGTATTGCTTATAAGGTAGAACAAAC 1465 36 94.4 0 .................C.................G | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.7 30 GTTTTAGAGCTGTGTTGTTTTGAATGGTTATAAAAC # Left flank : ATTTTAATCATACAACACCATTCTCAGTGGCAGAAAAAGAATGTGAAAAAGGTAGTGAATGGTTAATGCCATTCACTACCAACATACTCACTATTTCTCTCCACCAACACAATTTGACGAAGAGCCATAATAAGTAAAATGAAACCATTCAAAGCTGAAGTTTTGCTAGAACGAGCAGTTTGAGGATAAACCGGCGAACAAAATTCTGAGG # Right flank : GAAAAAAAGAGATATGTCATATCGAAAATCAGGTTTTTCAAATAACCGGTTAAAAAATAAAAAAGAGCCTTGGTTAGACGGACCGAAAGCTCTTGTAATCTCAACGGTCATTACAGCGATTGTTGAGATAATCAAACACTTTTTAAAATAAAAAGTGACGGGGAGGGGCGAAAGCCCCAACCTGTATCTGATTATAACATATCTTTTTAGTACAAAACAATGAAAAGAAAAAATGATAATTTTTATGTAGGTATTGGAGTTGTAATTTTAATTCTTTGGTGGATAAAAATTTTAATTTTTGGATAGAAAAGAGTTGAGTTATTTGTAAGTATATACACTAAAACAGTGGGGAAATTTAAGAGGTTTTTAGCTTTTAAATCAGGAATTTTTTCAAAAACAATTAGTAATGATGAAAATGATATAAAAAATGAGAAAAGTATCTTATTAAATTGTAGAGAAATTGGAAAGTGTGCTGGATATAAAGACAGCACAAATTTCTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTTGAATGGTTATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGATTTGAATGGTTACAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 7780-8276 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNJX01000035.1 Granulicatella sp. zg-84 Scaffold34_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7780 36 100.0 30 .................................... TTAAGTCGTAACCTAACCCCCCTACTTTGT 7846 36 100.0 30 .................................... AATAAATATTGCTTATATTTCTTTGCGTGC 7912 36 100.0 30 .................................... TCTTTAGAAGAGTATAGGAGGTTTAACACA 7978 36 100.0 30 .................................... ACATGACGCTATCAATCCTAGTCATTATAA 8044 36 100.0 29 .................................... GTTATTTGTTTACAAGACAAGTTTGCCAA 8109 36 97.2 30 .........T.......................... AAAACGTGTAAAGCGACCTATTGAAAACCG 8175 36 100.0 30 .................................... AAGTTGTGGTGATTGGGTAATGAAATATTT 8241 36 88.9 0 ..............C..............CA....G | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 98.3 30 GTTTTAGAGCTGTGTTGTTTTGAATGGTTATAAAAC # Left flank : GGGTTTCATTAGAAATAAAGCAACACAAGAAGATTTAAACGAATTAAAGATACTTATACAAGAACGAGAAGAACAATTAAAATATACAGAATAGGAGGAAACTACAAAAAAGCCTTTTACAATAACGAATAAAGCGACAATGATGATACTACTTATAATTGAAATCATCAAAATTTTACTCGAAATAGTAAAAGAACTTTCGAAAAAATAGAACCGCTAAGGGCCTCGGCTCTTAGTTGTATCTTACTTATAAAATATCATGAAAAATACAAATATTATTATGGATTGCGATTATTTTGAATATCGTTCTTATTTTATTGCAGATTAGACGACTTATATAATGACGGAAAAAACTCAAAAATATCGTAGTTTTATAAGAAAAATTATATTATTTTAACGTTAATAATATGAATGTGTTATAATCAAAATAAAAGGCCATTCAAAACTGAAGTTTTGCTAGAACGAGCAGTTTGAGGATAAACCGGCGAACAAAATTTTGA # Right flank : GAAAAAAAGACACACTATAAACGTTAATTCGACAGCGTTTCAAAGGCGTGCCTTTTTTTGTACACAAATGATTTTATCGATAAATATGATTTATTACAGAATCTATATTTACCAACGATATTTTTGTTGTCTATTAGATATGTTTTATTACTCCCCATGTGATTATTTTTCTTAGATATGGTACAATAAATACAGATATACATAAAGGTCGTTATAAGATGAAAAAACCAAAAATATTTGATATGTGTTTTTCTGTCATTCATGATGCCTATGTTAAAAAGGCAGTGCGTAAACAGAGGACGAAAGAGGAAGTAGATACAATTATTTGTTGGTTAACGGGTTATTCTGTCGAAAATTTGCATATGCTGAGTAGGTCTGAACACATCACGTTAGAGCAGTTTTTTAATCAAGCACCACATATCAATGAGCATGCTGATTTAATTACAGGGACAATTTGTGGTGTGAGAATTGAAGAAATTGAAGATGATATGATGAAGAAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTTGAATGGTTATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGATTTGAATGGTTACAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //