Array 1 3670144-3670769 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR215983.1 Eubacterium limosum isolate Eubacterium limosum 81C1 chromosome 1 Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3670144 30 90.0 35 G......G....A................. GAAACGAAAAAGAGACAATAAAATGTTTAAAGCAA AAGGC [3670150] 3670214 30 100.0 36 .............................. TTGCAGTAATTTTACCGATTGTATTTATCTTGAAAA 3670280 30 100.0 34 .............................. GTAAAGAAGATTTTAAATTGCTTTATAGTACAAT 3670344 30 100.0 36 .............................. ATCGGGCGGGTCATCGGTGTTCGGGTTGTAGTTATC 3670410 30 100.0 36 .............................. TGAAGCCTGCGAAAATAAAGGCCGCAGACGTATCTT 3670476 30 100.0 37 .............................. TAAACTGCTTCGGAACTCTTCAAAAATTACCACATCC 3670543 30 100.0 36 .............................. AAAGAGAGGGCATCAGGATTAGCATTGTCAATGCAC 3670609 30 100.0 36 .............................. AAAGAGAGGGCATCAGGATTAGCATTGTCAATGCAC 3670675 30 100.0 35 .............................. GGTGGTTAGATAACGGCGTTCTGAGACGCTTGAAT 3670740 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 99.0 36 ATTTAAATACATCTCATGTTAATCTTCAAC # Left flank : CTGCCTGATTTCATCGAGATAAGCAGCCATATCCCTTGTGGGATCTGTGGCGTTCAGGCCAAATACCACTGGAAAATCACCTACCAGCGGAATAAGCTCCCGAATACCAAACTCATAAACCATATCATTGCTGTTGGCATAGGGCAAAAGTCCGCCAAGAGAACCGCGTCCCATCCCGCGGAAAATGCCTGAGTTCAGCGCCAGAAGAAAATCAGCGCCACCCTGAATCGCGTATTTTGCCGTCAGCCCCGTTCCAGACGCGACGGCAATCAAATGATTCTCTGCCTCAATTTCTCTTCTCAATTTCTCCAGAAAAACTTCCCTCGAAAGCATGCACTTCCCTCCTCATCTTTTTATCCATTATCCGATAATATGCTTAAAACCAGCCCAAGCTACACCTCTGCTTCGTAAACTCCCTTATAGAACACTAACATTACGATAGCCAGTAAAACAATACTTAACATTCGCAAAATACAGTTTGAAAAGCTCTGTATATTGTT # Right flank : CCATAGCAATCAAGCCAATCTTAAATTAACGAATACCTTCCAATCCCTTTGGCTTAGCCATTTTTTGTCATTTTTACCAGGCCGTTAAGGTTTATGATATTTTCATCCCATTTTCTTTCCAAAGCCTTTACTTACGGTTCCTTTTACCCATCTGCACCAAAAGATGCCTGGGAAATTCTTAAATCTTTCTCATAATAAAATTATACGCGCAAAGCCCCCTGAGGGCAACTCCCTATGGAGTTTTCTTGAAATGGTTTTTTTATAGTACACAAAAAATTGCAGATAACGCTTGCAAAAAGAAAAAAATGCCGTTATAATAAAAATCAAGTTAATATTTATGAATGATATGGTGCCCCGTAAGGGGAGAATAGGGAATCAGGTGAAAGTCCTGAGCGAACCCATCACTGTAAGCGGTAGTGACCGGCAAGTGCCACTGAAAGGGAAGGCGTCGGTTCATGTTAATCCGTAAGTCAGGAGACCTGCCTATGATTCTTAACGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAATCTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 3944796-3943863 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR215983.1 Eubacterium limosum isolate Eubacterium limosum 81C1 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3944795 30 100.0 35 .............................. TGATCTCACCTTACCTACAAAAGTTGTAGCTTACA 3944730 30 100.0 35 .............................. ACTGGTATGAGCCCGCCAGGGAACAGGTCAAGCAC 3944665 30 100.0 36 .............................. CCATTGTGGATGATCGGAAAATCCCGTGTTACACAG 3944599 30 100.0 35 .............................. CTCCAGCAAGTTTTTTGTCTCCAATGCGTTCAAAA 3944534 30 100.0 36 .............................. TCGTTTGGGTTTCATTCTTAACTACGGGCGTGCTTA 3944468 30 100.0 37 .............................. GCAACGACCTGCTGGCCGGAAAAGACGTGGATTGGAG 3944401 30 100.0 37 .............................. CGGGAGAGCGGCAGTGGCAAGAGCACGCTCTCCCGCC 3944334 30 100.0 36 .............................. TGAGACAGCAGCGCAGACACGTTCAGAATTCTATAC 3944268 30 100.0 34 .............................. TCCGGACGCATGCGATAAACAACACCGCTGCCTT 3944204 30 100.0 34 .............................. CACCCATGTTTACATGGCCTGCTCCAATGCGGTT 3944140 30 100.0 34 .............................. CATTGCAGATATCCCTGATCTGGATGAGCAGGAA 3944076 30 100.0 36 .............................. ACCGGAATGGCAAATTCAAAGGTGAGCGAAACCGTG 3944010 30 100.0 36 .............................. TCTGGTATTTTGGCGTTTATTTCTCTTGTGCGGGCC 3943944 30 80.0 22 ...............A.A.......G.CCG TGATGTAAGGCATTATATGAAC Deletion [3943893] 3943892 30 70.0 0 ........A...T.AA..C.A......TCA | ========== ====== ====== ====== ============================== ===================================== ================== 15 30 96.7 35 GTTGAAGATTAACATGAGATGTATTTAAAT # Left flank : TTTATCCCCTTTAATATGGGAGAGAAGCTATGAGTACAAATAAAAAATTAAATTATAATTATGCCTTCGTGTTTTATGATGTCAATGAAAAGCGTGTGGCTAAAGTTTTTAAAACATGCAAAAAATATCTTGTGCATTATCAGAAATCTGTATTCAGAGGAGATATAACCCCTTCAAAATTGATTGTCTTGAAAAACGAACTGAAAAAAATTATTGTCGAAGATGAAGACTTCGTCTGTATTGTAAAACTGCTGAATGGAAATGTCTTTGAAGAAGAAGTCATGGGCATCTCCGAATCCTCAGAAGACCTTTTCCTGTAGCTCTGTTTTACCAGGCACAGAAAATTTTAAAAGGTCAGAATTCTTTTAAACAAAAGGTTTGAGCATCATTTGAAAGAAGAATTGACGAAAATCTCTGCGGCTGGTAAATTTGCAAAGAAATGGCTTGAAATCAAGGGTCTTAGAGAATATAAATAGAGGAAGAATGGCTTGATTGTTATG # Right flank : ACATAAAACAAAAACCGTCAGCATACGCTGACGGTATAAAAAGCTTTTATTCTTCCTCGCTATTCTCGAACAAAGTGTCCTCCTGTTCGGCATAAAGGCTGTCCAGCTCCTCATTAAGCAGCTGGTTTGCGAGGATAACTTCTTTAATTTTCTGGACCAGGCCGGAGGCGGTCAGCAGACAGGCTGGGATGATGATAAACCAAAACATGTGAAACATACTGACTTCTCCGCCGGTAAAGAAGGTGTATATCAGTCCCCCAAAGCATCCGAGCATGATGACAACAGTCACGATAAGGGTAGCGTTGAAGGACATATCCATGGTCAGGGCCACAAAAATGCACAGAACAAAAAGAATCAGGTAGTCCATAGCAATAAAACGTCCCGAGGACAGGGCAGTAAATACCCCCATGCCCAGCATGGCAATAACAAATAAAATCAGACGCAAGGAAACGGCGGAATATTTAAAGGCGCCGAGGGAAACGGCATCAACGTTTTCGTAA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //