Array 1 51337-52886 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRFV010000007.1 Fusobacterium sp. DD45 JD6_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 51337 36 100.0 30 .................................... TAAACTTCTTTGCAAATTCTTGTAAGTCCA 51403 36 100.0 30 .................................... CGGGTATGGAAGTAAGATATTAGATACAGA 51469 36 100.0 30 .................................... TAGATTGTAATTTTAATTCCTGCTTGTAAG 51535 36 100.0 30 .................................... AGCATAGAATTATTTATTAAGTATACCAGC 51601 36 100.0 30 .................................... AGAACGTAAGGACTTTACGTTGGAAGATAG 51667 36 100.0 30 .................................... ATAGATGGACTTATGAAGATGACCTTATAA 51733 36 100.0 30 .................................... ACCAAAATACATAATTATAAAAATGCCAAT 51799 36 100.0 30 .................................... AAAGCAAGAATTAGATAAAATAAAAAAAGA 51865 36 100.0 29 .................................... TTTAGGATTTTTTCCTAACAACCACTGTA 51930 36 100.0 29 .................................... AGATTTACATAAAGAAGAACAATATAAGA 51995 36 100.0 29 .................................... CAGTTTTATTTATGAACTTAGGTTTATAT 52060 36 100.0 30 .................................... TTTATCCCTCCTTAGAGTCTTAAATCTACA 52126 36 100.0 30 .................................... GAAAACAATTGGGTGGAGAACAAGGAAGCG 52192 36 100.0 30 .................................... GGTAAGGCTACTGATTCAACCTACTTAGAT 52258 36 100.0 30 .................................... GTCCTAGATTTTCCATGTCTAGGTGGCATA 52324 36 100.0 30 .................................... ACAATTATTTATATATATATGCGGAAGAGT 52390 36 100.0 30 .................................... CAGTGGCAAAACCTAATTCACGACAAATAA 52456 36 100.0 30 .................................... TATCTGCCGACAATTAAAATTGTATGACCT 52522 36 100.0 30 .................................... AAATAACAAAACTTCTTTAGAGTTGAACTT 52588 36 100.0 30 .................................... TTTTGGAAAAGCTGTAAGTGAATATAATGC 52654 36 100.0 29 .................................... TTGCTTGGGTTTCAGTGTCAAATTTAAGT 52719 36 100.0 30 .................................... GAAGATGGAACAAATGAACTTGTCGGAGTT 52785 36 100.0 30 .................................... TAATAATTTTATGCAACTATATAACCACCT 52851 36 94.4 0 ...............G..................C. | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.8 30 GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Left flank : TTGTATTTCCAGAAAATAAAATTGCTTTAAAGGATATGCCAAAATTGCGAAATTTTTTGTTTGAATTGTCTAAAGAGAATAAAGTAATAGTGGCAACTTTTTCTAAATATCTTTTTGATTTTTCAACTTTGGATAATATTAATATTTATATTAATTCAAAATTAGCAAATTCTTTTACAGAAGATGAGATAATAAACGAAATTTATGAAAATTATCCGGTATTGAAGTCAAAAAATGAAATAAATGCTCTTCTATCTTTTGTATTAAAAAATTATTTATCTGATGTTTTACTTGGAAACATAATTACTAATAAATTTTTCTGTGAATTAGATAATGTTTTTATTGAAAATTATGAATTTATCTTCTTGCTCCTTTATTATTTAAAAAAGATAAGATTGAGTTATAAACTTAACTTGAACTATGATCCGACCTCTCCATTTTCGAACTATATAGAAGAAAAACTTTTAACATAATGTGATATATGTTAGAATAGATTTGAG # Right flank : CCAAGGAAAAAAGGTTCAGAACTAAGCGTCTGAACCTTTTGTTATTTTTCAACTATTAAAGAATAATCTTCTGGAGTATCTATATCTAAGAACTCCTGAGAATATGGAAAATCAACAAGAGAAACAAGTGGAGTATTTCTAATTATATTTTTTCCACCATGGTCACCTTGAAGAGCAAGAAGCTCTTCTTTTTTACTATATGGAAAGAATACAGGTGAATATCTATCTCCATTACTTGTTGGAACAGTTATATATCCATATTTTTCAAAGTTATAATAGAGTTTTGAAATAGTATCTGGTGTCAAAAAGACCTGGTCACCAGTAAAAAATACAAAACCTTTTCCTGAAGAGTTTTGAACTCCTAATTTAATACTTTCACTCTGTCCTAAATTTGCTTTGGTGTTGTGAAGATACTTACAATTATATTTTTTACAAATATTTTCAGTCCAGCTGTCCCTTCCACATACCAGTATTTCAAAAAAGTTGGCGAAATTAAGTTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 20778-23037 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRFV010000026.1 Fusobacterium sp. DD45 JD6_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 20778 30 100.0 36 .............................. AGGAATAAAAGAAAGTTACAAAATGCCAGATACATT 20844 30 100.0 37 .............................. GATGTATTCCCAAATACAAGAATAAAGTACGGAGAAG 20911 30 100.0 36 .............................. TGATTAGAATCACAATTTGTGTTATAAACATGCCCA 20977 30 100.0 37 .............................. TAAGCATAAATTATTTACTATTGATAACACAGGAAAT 21044 30 100.0 37 .............................. GTGATTGCGTTTCTGATGTCTATATACTTCATTTATC 21111 30 100.0 36 .............................. TATTAAATACGGAGAAGCTAGTATGAACAAATGGGC 21177 30 100.0 36 .............................. TCTGTAATTGTTCCTTCTATAAGATATGCACAAAAC 21243 30 100.0 36 .............................. AGTTAATTATGCAGTAATAGAAAGCAATAATGGTGG 21309 30 100.0 34 .............................. AGACAATGGAAAAAGTTTACAAGAGAATGGGAGT 21373 30 100.0 35 .............................. AAAAAAGGAGGATTAAAAATGTGGAGATGTAAAGA 21438 30 100.0 37 .............................. GATATAATACGCACGGAGAAATAGAACTTAAACTCAC 21505 30 100.0 36 .............................. TTTTAAAATGGAAAGTCATCCACTCCAATATCCTCA 21571 30 100.0 36 .............................. CAGGAAATAGCAGTGGAGTTGCACTAGGCTTTAAAC 21637 30 100.0 36 .............................. ACTTTATTAAAGAAAATAAATGCTAATGCAGATACA 21703 30 100.0 36 .............................. TAGTCTACTCTATGAGCTTTCACAGTATCTTTTATT 21769 30 100.0 36 .............................. TAAAAGGTCTATTTACTGCTAAAGAAAATCTGATAT 21835 30 100.0 36 .............................. TAAAAGGTCTATTTACTGCTAAAGAAAATCTGATAT 21901 30 100.0 35 .............................. TTGCAATCTTCCAAGTCCTTTTTAAGTTCTGAAAG 21966 30 100.0 35 .............................. TTGGGGATGCAACAAGAAAGAGTCTATATTTGGAA 22031 30 100.0 36 .............................. AGTTTTAGTTGTAACTCATATTGATAAAAAGCATAT 22097 30 100.0 36 .............................. TGCCAGAATTTAGGCTTATTGAGCACGAAAAAACGG 22163 30 100.0 36 .............................. TCTTTTCCAAACTTTTCTTCTGTTATTTTTTCAAGC 22229 30 100.0 35 .............................. TGGCAGTTAATATCTTTTAAATCCTTATTATAAAA 22294 30 100.0 34 .............................. TATTCTTTCATTGCAGCTTCCATCACATGTGCAC 22358 30 100.0 35 .............................. TGGCAGTTAATATCTTTTAAATCCTTATTATAAAA 22423 30 100.0 36 .............................. TCATCCGAATTAGTCATCTCATCTGTCCACCCCATC 22489 30 100.0 35 .............................. CAAAAATACAGAAGTCTTTACAATACTGATGGAAT 22554 30 100.0 35 .............................. TCTTCTGTTTTTCCCTCGTATTCATCAATTTTTTC 22619 30 100.0 34 .............................. CTTGATGAATTAAATAATATATTACAGCTAAACT 22683 30 100.0 36 .............................. CAAAATAATAAAGAAATTGAAAAGTTATCTATTAAA 22749 30 100.0 35 .............................. CTTAAAGCAGATTTTAAACCAACAGAAAAAGAAGT 22814 30 100.0 34 .............................. TAAACATACTTGATACAACTGCATTCATTAGTTC 22878 30 100.0 35 .............................. TTTAGAGTTTTCAGAGTCTCCAATGTTTCACTTCT 22943 30 100.0 35 .............................. GTAGTAACACGAGGGCTCTTTAGTTTATCAACAAA 23008 30 93.3 0 ..............CA.............. | ========== ====== ====== ====== ============================== ===================================== ================== 35 30 99.8 36 ATTGAATAATTACATTGGTAGTATTTAAAT # Left flank : AGAATTCTATCCTTTTAACATCAAGGAGAAGATTTAATGAGTAGGAATAGATATAATTTTAACTATATTTTTCTTTTTTATGATGTAAATGAAAAAAGAGTAAATAAGATTTTTAAAGTATGTAAAAAATATTTAACACATTATCAGAGATCTGTTTTTAGAGGAGAAATAACACCAGGTAATCTTCTAAAATTAAAAAATGAGGTAAGGAAAGTTATTAATGAAAAAGAGGACTCTGTATGTATAGTCAAATTTATAAATGATAGGTATTTTGCAGAAGATACACTAGGAGTGCTATGGAAAGAAGATGAAGATTGTTTTATATGAGTTTTCCAAGTGGAAAAATAAAAAAAACTTTGAAATCCTCATAAAATAATTGTTTGCAACGAAAAATATAGAATATTGAAAATTTGATGTGAGGTTGGAAAAAAATTGAGGCATTCCTTAAAATATGGTATATTGAAAGAAAGTTGTGATTTCAGAGTAAGCTGATTATGACC # Right flank : TATACTTCACCTAAAAACTTACACAACTAAGAAGGACGGTGGAGTTTTTTAGTTTTAAGAACAGAGATTATTTTTATTCTAAAAGAGGCCTATATGTGGTATAATTAAAACATTGAAATAGAAGTAGGAAGTGAAATGATGGGAAAAATTATTTATTTTACAGGTGGAGCTAGAAGTGGAAAAAGCTCTAAAGCTGAAGGGTATATTTTTGCAAGAAATTATACTAAAAAAATATATGTTGCAACAGGTATAGCTTTTGATGAAGAGATGAAAGCTAGAGTAAAAAAACACCAAGAACAACGAGGCAATAACTGGTTGACAATTGAAGGATATAAAGACCTTGTAGAAAAAATAAAACCTCATGTTGAAGCAGGTGGGGTAATTCTTTTAGATTGTTTAACAAATATGGTAACAAATTTGATGATAATGGATAAAGAGTATGACTGGGATAAAATTTCAGTTGAAGAGGTTGAACAGTTGGAAAAGGAAATTACTGATAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATAATTACATTGGTAGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //