Array 1 3734908-3738356 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040709.1 Inhella inkyongensis strain IMCC1713 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 3734908 37 100.0 33 ..................................... GGCGTGGGCCTATGGCACGGTCCCGCAATCTGG 3734978 37 100.0 33 ..................................... GCCCTGGCCGGCGCGACGATCCCGCCCGGCCTT 3735048 37 100.0 34 ..................................... TTGGCTTGACGCTTACAGTTTGTCGCGAGTTGCG 3735119 37 100.0 34 ..................................... ATGTGCGGCCTTTCATGCCACGGGAACGCCGCCC 3735190 37 100.0 35 ..................................... GTCAGTCTCACGCAGCCAATCGACACCACCAATGC 3735262 37 100.0 35 ..................................... ATCGAATGGGATTTGAGGCATGGCCGCGCGTGGCG 3735334 37 100.0 34 ..................................... CTGTTGAGCCGCGCTCAGGGTCGGGGGCTGTGGT 3735405 37 100.0 33 ..................................... GTTGAAGTGGTGAACAACGCCGCCAGCGGCACG 3735475 37 100.0 34 ..................................... CGCGTGGCCGAGCCGCATCACGATGGGACGCCGC 3735546 37 100.0 33 ..................................... TGGCTAGGATTGAGGCGGTAGGCGCTAGCTTCG 3735616 37 100.0 33 ..................................... ATCGAAAAGCCGAATCAATTGAGCCATAGCCCA 3735686 37 100.0 35 ..................................... CACCATCAAAGGCTCTGCGGGCCGGCTGATCGGAT 3735758 37 100.0 34 ..................................... CTCATGGCGCCCAGGCCTCCGACAGATCCGGCAC 3735829 37 100.0 35 ..................................... CCGGCGCTCTTCGACGGTCTGCACGCCCACAACCT 3735901 37 100.0 36 ..................................... AAGATCCCCCCGGTGATGTTGTCCACGAACTGGAAC 3735974 37 100.0 35 ..................................... GCCTGCTCGATGCCGAGCACTTGAGCGCCGCCGAC 3736046 37 100.0 34 ..................................... GTTTGATGTGGTGGACAACAGCAACCGCAGCAGC 3736117 37 100.0 34 ..................................... AGCGCAGGCAAGCGCATGCACCGGATCACCCGCA 3736188 37 100.0 35 ..................................... TCGATCTGGGCATCGGTGAGCTTTTGACGTCCTGA 3736260 37 100.0 33 ..................................... CGCACGCCCTCCGGCGTCTGGCTGCACAGCACG 3736330 37 100.0 34 ..................................... GTCTGCGTCGACGACTGTTTGTAATGGCGGCTGC 3736401 37 100.0 34 ..................................... GGCCAGATGCTGGCCGATCTCGGGGGGCCAACGG 3736472 37 100.0 35 ..................................... TTCGCGTTCCGTGTCGCCATCGATAACTGAGGCCC 3736544 37 100.0 34 ..................................... ACGGAGTGCGGGCGCGCTCAAACGCCACCTCCAC 3736615 37 100.0 33 ..................................... ATTGTGCCAACACGCGCCGGCATCCTGGGCGGC 3736685 37 100.0 35 ..................................... AACGGCACCGCCATTGCCAACCTGGCCGACAACGC 3736757 37 100.0 34 ..................................... CAGCCCATCTAGTGCCTCACTTTCGGGCCAGCAG 3736828 37 100.0 34 ..................................... ATGCCTTCGGGCGTGCGCGCCGCGCTCGAAAAAG 3736899 37 100.0 34 ..................................... TGTGATGCTGGCGCGGGACAAGGCGATCCGGGCC 3736970 37 100.0 34 ..................................... AAGGACGCCCGCGACAAGCTCAAAAGCGGCCTGC 3737041 37 100.0 34 ..................................... CTGCAGGGGCGCCGCAAAGCGCTCGGCCAGCTCA 3737112 37 100.0 34 ..................................... GGGTGGCCGGGAATCCGTACTGGCTGACCCTGGA 3737183 37 100.0 36 ..................................... TGACATGGTGAAAGCCCGCCAACTGATCGCCAAGAC 3737256 37 100.0 35 ..................................... TGCCAGCAGCTGGAGCACGTGGCTTTGCCGTGCGA 3737328 37 100.0 33 ..................................... TTCATTGCCGGAGCGGGGATGTACTCAGCCCCG 3737398 37 100.0 35 ..................................... TGGGAGGGAGCCATGCCGCACATCACCGCAGCCTT 3737470 37 100.0 33 ..................................... GGCGGTGATGCTGGCCAGCCGTGCGGTGGCCAA 3737540 37 100.0 33 ..................................... GGCCTGCCCCCGGGCACCGTCGAAATCGTCGGC 3737610 37 100.0 34 ..................................... ATCCGCTGGTCTTGGCGCCGCTACTCCTGCGGCG 3737681 37 100.0 35 ..................................... TGATCGCTCAATGCGCTTGCGCTCGGCTTCAGTAG 3737753 37 100.0 34 ..................................... TTCCATCAAGGCCTCGCTCTTGCTGATCCAGCTC 3737824 37 100.0 33 ..................................... GCTGGGTCGCTCGCTTGAGGACTTGAAGCGCAA 3737894 37 100.0 34 ..................................... CAGTGGTGAGGGCCGGGCAATGATCATCTTTCAC 3737965 37 100.0 33 ..................................... ACGCACGAGCTGCAGGCGGTGCAGTGGATCGAA 3738035 37 100.0 35 ..................................... TTCGTTCAGCAGGCCAGCGCGGCCGGCGATGACGC 3738107 37 100.0 34 ..................................... TTTGGGTAACTGCCCTACGGGGTTGCCTGATCAG 3738178 37 100.0 34 ..................................... CTGGAGGCCGGCAGCATGAGCGGCATTCGGCCCG 3738249 37 100.0 35 ..................................... TTGGCATCGGTGGGCGGCAGGCCCACCAAGCCGCC 3738321 36 97.3 0 ..............................-...... | ========== ====== ====== ====== ===================================== ==================================== ================== 49 37 99.9 34 GCACCGCCCGCCTTCACCGGCGGGCGCGGATTGAAAC # Left flank : ATGTTCCCTATCTGATTCGCTGAGCGAGCATGTTGGTCATCGTTTGCTATGACGTGAACACCGAGACCCGCGAGGGGCGGCGGCGCCTGCGGCGCGTCGCCAAGCTGTGCGAGGCCACTGGGCAACGCGTGCAGAAGTCGGTCTTCGAGTGCCAGATCGACCTGGCCCATATGGAAGAACTGGAGCGCAAGCTGCGGGCCGCCATGGACGAGACGCAGGACTGTCTGCGGCTCTACCGCCTGCCCGAGACCCGCGGGGCCGAAGTGCGCGAGTACGGGCGCTTCAAGGCGGTGGACTTTGAGGCCCCCTTGGTGCTCTGAAGCCAGGCCTGCGCGAACCCCCAGTGATGGCTTCTCACGCCATGGGTTCGCGTTCCGCTGCCGGCGCCGTGCTGATGCAGTGTTGCCGGCATTTCCGGGCGTTCGCACCGGGCACTTCCATCGGGGGTTCGCGCGGCACGGCAGAATTCCGCCGCTCCCACAAGCACTTGCAATGACGGA # Right flank : CGGATCTTGGCCACTGACGCCAAGAGCCCCAGCCTCGCAACTCCATCTCGTATTCGACGAGCTCCCACCTTCACGGCCGCACTCCCCGCACCGCCGTCGCCCGCGCTCGCACGGTGATGGCGCCGCCGCTGTCCTGCAGCCGCTGCCGCACCCGGGCCTGCAACTCGCCGCGTGTGGCCTCACTCATGGCGTCGAACATCGGCCGCAGGGTGTTGCTGGCGGCGGCGCTGTGCCAGTAGTCGTCGAAGTGCGCAAATTGGCGCTGGACCTCGATGGTGCGGACCTGCACTTGCTGCAATCCGGCCTGCTGCCACAGCGCGGCCGAGGCCTCGGGGCGGCTGATGGCGGCGCTCGGCGGCAGGCGCGGGGGCAGCCCCATCTGCTTCATCTCGGCGCCGATGTCGGCCAAGGGAAAGCCACCGTTCAAAAGGTCCCAGTGGTAGGCGGCCAGGGTGCCGCCCGGGCGCACTGCGCGCACCATCTCGGCCAAGCCGGCAGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCACCGCCCGCCTTCACCGGCGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCACCGCCCGCCTTCACCGGCGGGCGTGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.50,-17.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //