Array 1 416331-416029 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPR01000091.1 Hungatella hathewayi strain MCC342 NODE_115_length_714628_cov_54.884823, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ================================= ================== 416330 34 100.0 33 .................................. AATGCTATCAGAGATATCCGCGCCTCCCGGCTG 416263 34 100.0 33 .................................. TTCGATGCATAAGGTATTTCGATATACAGTCCC 416196 34 97.1 33 ......................T........... TGAATCCTTCCGGACAAATTCTGTCGCCATTGT 416129 34 94.1 33 .................C....T........... TGAAACTCCCTTTTCCAGTCAGCGCCGCAAGGA 416062 34 67.6 0 .................C...TT.A.A.AGTTGG | ========== ====== ====== ====== ================================== ================================= ================== 5 34 91.8 33 GTCTCTGCTAGCGATAGTGGAGGGGATTGAAATA # Left flank : GTCTTTATTGATTGAAGAAATAAACAAAAAGATTTCAACAAAAGAAAAATTTATTACGTAAGCAGATCCCGAAGATTTGGGAAAACTATGGCGTTGGAAATGCTGGCTTCTTATTATATAAAAGAGGGGGACTGCGGACTCTTTATTCAATAATCTTAATTAAAGAATTTCACACAAATATAGAACATTTAAATTGCCATAATGTAATCTATATTAATTTTACTGATTAGTTTGAGGTTATATTATCTGGTCAACAAACATGATACGAAGGTGGAACATTTTGGTGCCTATGAAGGGTAAATGTAGAAAAACCTCTCATTTTCTAGCCTGTGAATTATGGTGCGAACCAGAAGTGATCATAAAATCCCTGGGAGGTTCGCACCGAGAATTTCGCGGTTATGGAGGGAAGATAGGAGAATTGGATGAATTGAGTTAATGAAATATATGCAAAATACCCATGATTATTACTGGTTATATGGTATAATATGTGTGAATTTGCA # Right flank : GAAAAGATACTTTCCTTTGCACCCCCCCCTCTGTCTCCGCTAGCGATAGCAGAGTGTAATCGATTATTACAAAAATAAACCGTTGAGGGAGTCTCTGCCAGCATTAGAAGCTTATATTAAATTTATGAAAAAATAATTCACAGACGTTAAAAATAAAAAGACAGAGGAGACAAGGATTGAAATACATTTTTATACATGGACTTGGACAGGGGCCGGATAGTTGGAATAAAACGGTTTCCTGCATGAGAGAACAGGAAGAGATTCAATGCCTGAACGTATTTGCTTTAAAAGATGGGGAAGAGATTTCGTATAGCAGAGTATATGAGGATTTTTCGGCGTACTGTGAGTCTATAAAAACGGAGTTTGGGCTTTGTGGTCTTTCTTTGGGCGCTGTGATTGCATTAAATTATGTGGTGGAGCATCCGGGAAAGGTAACGTCGCTGGTTTTGATTGGGGGACAGTACGTGATGCCGAAGGGGCTTTTAAGACTGCAGAATATG # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTGCTAGCGATAGTGGAGGGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.94%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 1 136977-137811 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPR01000008.1 Hungatella hathewayi strain MCC342 NODE_8_length_525005_cov_65.842186, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 136977 33 100.0 33 ................................. ATCTAAGGCATTTTTTATAAAGAAATTTATTTC 137043 33 100.0 34 ................................. CGATATTAAGTTTTTGCAGTCACTATGCAAGGCA 137110 33 100.0 34 ................................. TAATACTTCTCTCGTACACAGTACACATAATCCC 137177 33 100.0 34 ................................. CTGCAAAGGAAACGCCGTGGAGTCCGTCCATAGC 137244 33 100.0 34 ................................. ACCTGAATATTGACTATGGTTTGTATGGGGTTGT 137311 33 100.0 35 ................................. ACCTGTTCTCCATAGCCAATCAGCAGGACTACATT 137379 33 100.0 33 ................................. TTTATATGGCCCTTCATAATATGCAGATATATC 137445 33 100.0 35 ................................. TGCTCCATGCGCAACTTCCGGCGGGTGAATATGTC 137513 33 100.0 34 ................................. CGTGTGACCGTTGTCCATGCCGCTTCCCCCTGCT 137580 33 100.0 33 ................................. TGTGAAAAGTCAATCTTGCCTGTTGACTTATTT 137646 33 100.0 33 ................................. TATGTATCTGCGAATGGAAGCAATATAATGGAA 137712 33 100.0 34 ................................. TATCCGGGCGAAGTCGGACGCCTCGGGGTTCACG 137779 33 93.9 0 .......................A........C | ========== ====== ====== ====== ================================= =================================== ================== 13 33 99.5 34 GAGTCATCTCCTGCGGGAGATGTGGATTGAAAT # Left flank : TATTTTACAGTGTCTTTTTATGACAAGGAGTATAAAAAAGCACTGAACATCTGCGGAACACGGTCCGGACGTGACTGCGATAAGGCGGCAGAAGCCGGGCTGACCCCTTATTTTATTGATGGTACTACGGCCTTTGAAGAAGCAAATATGATTTTTGTCTGCCGGAAGCTATACTGTGATCCAATGCCCGGTGATAATTTCCTGGATAAGGAAAATGATGAGAAATGGTATCCGGATAAAGATTATCATACAATGTACATTTCGGAGATTGTGAAGGTGCTTGTGAAAGACTGAGAAGAAAATTAGCTGTGAGGAGTGGCTGCACGGGGCGGTAGCTGGTGCGAACCTTAAGTGAACATAGAATTACTGGGAGGTTCGCACTGGAAATTGGGGGGAAAATGGGGGGAATATGGAGTTGATGATTGATTTTTAAAGGGATTGTTGTACAATATAGTTAAGGATGTGAGGGGAGTTGGGGAGGGAGATTGGGGAAAATTGCT # Right flank : CCATATGGAAAATCATACTAATGTCAACCAATCTGTAAAAAAATGTCCCACAAACACTTTGATTTCCACAAAAAAGGACCTTCAGATCACCATATCCGAAGGTCCTTTTTTTATCCAATTTCCTTTTTCTACCTAATCACCAAGATAATAAAATGCTGTAAAATACCCTTTCTCATTATAGTAAAGATCATTACCGTATACGGTATATTCAGCCGAAGCCTCCTCTTTGCCTTCTTCAACCGGTTCTCCGGCGTATATTTTCTTCTGAGTTTTAGATGCTTCCGCAAGGTTGGTATAGGTGCCTGTGACGGCGCCTTTGAGGATATAAATATTGCCCTCATAGACCGTTTTCATAATCGTATCGTCACTGTCCTCCCACAGGGTATACGTTCCGTTCTCTAAATCCGCGGTGATCGCCGCCTCATTGCCGTAAGTGGAGGGATCCATACCTTTGTCATACGTCAAATAGCCGTTTGAACCGCTGGGCCCGGCGTTGGGAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTCATCTCCTGCGGGAGATGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 2 338924-339092 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPR01000008.1 Hungatella hathewayi strain MCC342 NODE_8_length_525005_cov_65.842186, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 338924 33 100.0 35 ................................. TTGAGATCGAACCGCAAAGGGCAAAACCTGAGAAA 338992 33 100.0 35 ................................. TAAATCCTAACAATCACGATTATAAAAAGTTTCTT 339060 33 93.9 0 ......................A.....A.... | ========== ====== ====== ====== ================================= =================================== ================== 3 33 98.0 36 GTCGCCTTCCGCAAGGAAGGTGTGGATTGAAAT # Left flank : TGCTGATTACATATGATGTAAATACAGAGACTGCCGCAGGCAGAAGCCGCTTACGCCGAGTCGCAAAGCAGTGTGTTAATTATGGCCAGCGTGTTCAGAACTCGGTCTTTGAAAGCAATATGGATGCGGCAAAATGCAGAGCTGTAAAGGGAATTTTAGAAGGAATTATTGATAAGAATGTGGATAGCCTCAGATTTTACTACCTTAGTGATAATTATAAGCACAAGGTGGAACATATTGGTGCGAAACCAGGATTTGATGTGACAGAACCATTAATTTTTTAGGGCAGTTGTTCTTTAAATAAATAGTTAGATAATTCTTTTGTATTAAAGTGCGAATGTCAAGTGAACATTAAAATACCGGGAGATTCGCACCTGTATTTTAGATGTAGATATACCGAAATATGTAATATAGTTTGATAAAATGATTGAATAAGTCAAAATGATAGAGTTCTGTTGCTGATGAGGAGAAATTCACTTGTAATTTGACTTGTATTTGCT # Right flank : TATTAACGTATTTCTCGAGGCATTTTACATCTCCTTCACTCCATATTCCCTGTTGACAACGAACCTCCTTGTCTCAGGGAATCTAATAGGTGCCTAAATGTTGAGAAAGGCGTTTAAAACAGCTGTCTGGAGCAATCGCTTACATGATACCCCACTCATTCTCAACAAGTTTTCCCTGTATACACGGAGAGTTTTCCTGTATAACCTGTTAAAAATCTTTCAAAAATCTATTACTCATCGGTATGCAGTATTGTATTTATAATTGGCGTTATATCATTTCCTTTCTTTAAACAGCTGCAATAATACCATATTACCATACACAGCCTGTGCCTGCTTCTGCACTGCTGCCTCTCCCCTCATCAGAAAAAAACAATTATTTAACACAGAACGGCAAAGGTTCCCGAATTACTGAACCTTTGCCGTTTTAATGTCAGAAATAAACCTCATATCCTTTCAAAAAGCACCATAATATGGTAAAATATTCCGATAATCACGCCCGG # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTTCCGCAAGGAAGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //