Array 1 8772-8933 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BMPD01000007.1 Haloarcula sebkhae strain JCM 19018 sequence07, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	==============================	=====================================	==================
      8772	    30	 100.0	    35	..............................	TACCGCGCTGCGACAGTTGAAGACTCGCTTATCGA  	
      8837	    30	 100.0	    37	..............................	CACTCGTCCCAGCAGAGTTCGGTTAGGTCAACCTGGT	
      8904	    30	  93.3	     0	..C............T..............	|                                    	
==========	======	======	======	==============================	=====================================	==================
         3	    30	  97.8	    36	GTTTCAGCAGAACCCCTGTGGGATTGAAGC	                                     	       

# Left flank :   GAATGGTGACCTCATATCTATGTCGACCAGTCGCCGTCGATTCCGCGATCTCAGCGAAGAAGCCGATATCACCGCTGATGGCGACCGGCCACCCAAACGCTCTGGCAGCGGTTTGGTACACAACCTACGGGGATGCTGTCCGGCGTGTCGCCGAGCGTTTTACTGACGTGGCCGTGGAGTAGGGCTCCAACGACGAGGGTGTTGTTCTCGATGACTACCGCTCCGACGCCGAGCAACGCCGGCATCGGCGGCAAGGAATGTGTGACGAAAGAAATTGTTCAACTGATGCAGTTCGATCTCAGTCCCTTTTGTAATTTTCCCCACAGGTGCAGCTGACCGGCGTTCAGTAAGGTGGTTACTGCTACTGCATCGGTGTAGCTCCGGCCAAGAATTTACTGTGTTACCATCAACCCCCGGGGGTGACCAGAGAATTGGAGGTCGATTGGAATTTCTTTGTGAAACCGGGCTCAAGAACTATTTATCCCGTCTAATTGGGGCGG
# Right flank :  CGCCCTTGACGTCAGTCCGACCGGCGACGCCGGCCGCGAACTGCTCACCCAAGGCCGCCCGCTCTTCCTTGGCGTCGACGGCGACGGCGCGGCCCACTACTGGGACAGCTACGAGTTCGCCGTCGCGGTCGTTGCGACCGACGGCGACGCCGAGAAAGTCACACTCGCCGACACCCCATTCCAAACACTCGCACAGTGGTGTGAGTACACGAGAAATGAACGTGGCTGGGCCGTCGGCCCGCATGTCGGCGGCTCACTCGTTGACAATCTCGTCCGAGGTGTTGAGGCATGAGCAAGACCGTTCGCTGTACGGTCGCAAACCGCCAGCGTGTGAAACGTGCCGCCCGAGCGCTTCGAGAGACCGTCCCGACCGTGCTGGTCGAAACGACGCCGCCGGTGCGCTCGGAACACGACGCGTGGACGCTCGACGCCGTGCTTCGAGACACCGAGGGCGTCCCGCCGGAAGTGCTGCGGGAGCTGGCACTCGCCGACCTGACACT

# Questionable array : NO	 Score: 5.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGCAGAACCCCTGTGGGATTGAAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [7,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 90% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-2.90,-5.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [55.0-25.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.37   Confidence: HIGH] 

# Array family : I-B [Matched known repeat from this family],   
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