Array 1 60883-58832 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKPO01000001.1 Flavonifractor plautii strain BIOML-A5 scaffold1_size366644, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 60882 33 100.0 33 ................................. GGGTTCCCTCCCCTTTTCCAGCTCATGGAGGGC 60816 33 100.0 35 ................................. AGAGATAAGAGGTGAATTAAATATGACCATCATCC 60748 33 100.0 33 ................................. GTCCCGCAGCGCCTCGGGGGTCTTGGCATCGCG 60682 33 100.0 37 ................................. CAAATGATATGAAGCATATACATACACATGCAATTGG 60612 33 100.0 34 ................................. TTAAATTTATCGGGCATATCCTGAAAAGCACCCG 60545 33 100.0 35 ................................. TGTCCGAGTTTGACAGTGAGGATGATGCAAAGGAA 60477 33 100.0 34 ................................. TAGTGTAAGATATTGCACACCCCACTGACAAGCG 60410 33 100.0 34 ................................. AAAAATTATGAAAGTTGTAGCGAATGGGCAGAAG 60343 33 100.0 34 ................................. TGCTCTGTGTTCCTTCATAACCCACAGGAAGCAT 60276 33 100.0 34 ................................. TATAAGCCATCTAGCGGCCCTCCTTTACTTAAAA 60209 33 100.0 33 ................................. ACACAGGTATACGTGATGATACATATTATACAA 60143 33 100.0 33 ................................. GTTAAGAGTGGAAAAACTGCTGATTATGCAGGG 60077 33 100.0 33 ................................. AAAAATTATGAAAGTTGTAGCGAATGGGCAGAA 60011 33 100.0 35 ................................. CTGGCCGGGGCATCATAGGTGTTGACGATGTCCAT 59943 33 100.0 34 ................................. TATGACACAATCACCGGGAGGCCCGTCGGCAACC 59876 33 97.0 35 .....C........................... CATGCGAGACTTTTCATCTTCGCCCAAGGCAAGCA 59808 33 100.0 33 ................................. TTTTGTTGCGCCTTTTGGGCGAATCCTTCGCAA 59742 33 100.0 33 ................................. CATCCGGCGTCCGCCTTGACCGTGCCATCAATC 59676 33 100.0 34 ................................. ATTGTAGAGGTAAAATCAACCCATCCGCCGCCGG 59609 33 100.0 34 ................................. TGTAAGGCCCCTATATCATCTAACCAGCCTATAA 59542 33 100.0 36 ................................. GGAATTAACTCTATCGCCAACTTTTACAGCAAAACT 59473 33 100.0 33 ................................. AGCAGGATATCCACTATCAGACTGCGGGTTATA 59407 33 100.0 35 ................................. CTCCGGCAACCTCTCCTTGACGCTGATCCACTCGC 59339 33 100.0 36 ................................. CATAGGCATCCTCGTTAAATGCTCTACAATTTGTAA 59270 33 100.0 35 ................................. ATCAACACTTTAGTAAGTGCATCCTCAATCTTTGC 59202 33 100.0 34 ................................. AGCAAAGGCAAGGCGGTGAAAAATCACCGCCTCC 59135 33 100.0 35 ................................. TGGTTTGTTAATCTTAAATATGCACCTACAGAATC 59067 33 100.0 33 ................................. ACCCTTGGAGTTATAAACACGCTGGTAAACACC 59001 33 100.0 38 ................................. AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 58930 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 58863 32 93.9 0 .................-.............C. | ========== ====== ====== ====== ================================= ====================================== ================== 31 33 99.5 34 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCGCCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACGGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGCAAGCTGGATCCGGCCCAGTACAAGCTGCTTCAAGCCAAGCTGTGCGCAATCATGGACCCCGAACGGGACAGTCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAGCACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGATGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTAATGGAGCATAGGCGCGTTTGTTTTTGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCCCTGCTCTTTGGTAAAGTTTGCT # Right flank : GTCTTACAGGGGCGCCTGGTCAGTTTGCAGGAGACGCCGCATAGGGGCGCGGGTCGATTCAAATTTTCACCCCGCGCCCCTGCTGTTTGCGTTTCTTTTCGTTGACTGGTATAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCATATTATGTGGATTTCAAGTGACTGGAAGGACTATGAGCTGCTGGACTGCGGCGGCGGCGAGCGTCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGTTACAAGGGGCTGACCCTCAACATCAAGCCTATGAACTTCAAGCACACCGGCGTCTTTCCGGAGCAGGCGGCCAACTGGGATTTCGCCATGGAGCGCATCCGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //