Array 1 212663-213728 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PRLE01000005.1 Faecalibacterium prausnitzii strain APC923/61-1 NODE_5_length_241513_cov_137.704, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
    212663	    28	  96.4	    33	..............G.............	CACCGTCATGAAGAAGAATTTTCCCGGCGGACA 	
    212724	    28	  92.9	    33	............TG..............	TGATGCACAGGACAAGCGGCTGGATGAGCTGGA 	
    212785	    28	 100.0	    33	............................	TTTCGAGACGGATACCATCTATACCACCCCTAA 	
    212846	    28	  96.4	    33	............T...............	TATCTGCGGGGACAACACCATCACCAGTTTCCA 	
    212907	    28	  96.4	    33	............T...............	CTACACCAGCCATACCTCTGGCGTAGCTCTGTG 	
    212968	    28	  96.4	    33	.............G..............	CACGTCGCCGCTCATGAGCCAGCTTTTCAAGGC 	
    213029	    28	  96.4	    33	..............T.............	CGACACCCCGGACGACTTCACCGATGACAGAGT 	
    213090	    28	 100.0	    33	............................	CATTACAGGGATTTGTACAGGATAACGATTAAC 	
    213151	    28	  92.9	    33	.............G.......A......	CACGTCCTGAATGTTGGAGTTCTTGCCGAACAT 	
    213212	    28	  96.4	    33	............T...............	CCATGCGTCTGGATTGCCGCCCATCTCAAAGAG 	
    213273	    28	 100.0	    33	............................	CTTGGTGGTCGCACCCATCTCCTTGGCCTTGTC 	
    213334	    28	  96.4	    33	............T...............	TCCCGAAGCGTCTGGGCACATTTACACGCTCAG 	
    213395	    28	 100.0	    33	............................	TGGTTTCTCGACAACTCCATTTTAGCACGACTG 	
    213456	    28	  96.4	    34	............T...............	TGTAGACCTCAACGTGACCACCCGCAACTACCCG	
    213518	    28	  92.9	    33	......T......G..............	CTGCGCTCAGGCAACCGCCGAGAGCATCCACAC 	
    213579	    28	  96.4	    33	..........T.................	CAACACCGCAGCCTATCCGGGCAGCACCGACCC 	
    213640	    28	  92.9	    33	............T.............T.	CATGGACGGTGCCAGCAAGTTTCATTTCGACTG 	
    213701	    28	 100.0	     0	............................	|                                 	
==========	======	======	======	============================	==================================	==================
        18	    28	  96.6	    33	CTTTTCCCCGCACACGCGGGGGTGATCC	                                  	       

# Left flank :   CTGGCGCGGATCACACCGGGCAGCCGCTGGCAGTTTCGGTTGGCGGCCAACCCCACCAAAAGCTGCAAAGACGCCCAAAAACCCACAGCGCGGGGAACCGTGGCCGCACACTGCACGACACAGTACCAGAAGCAGTGGCTGTTGAATCGCGCCGCAAAGCACGGCTTTGCCATGACGGAGGATTCCTTTACCGTGACCCGGGTGCAGTGGCACCACTTTGCCAAGCGCGGCACCCGCCCGGTGTCGCTGCTGGCGGTGACGTATGAGGGCGTTTTGCAGGTGACGGACCCCGAGGCGTTCCGGAACCTGCTGTGTCAGGGCATGGGCCGGGGCAAAGCCTACGGCCTTGGCCTGCTGACCGTGATGCGTGGAGGATAAGACCATGGCGGAGATGCCGGGTATGATCCGGCCAGACCTGCAGGCGCTGCCGCAGGTGCGGGACCGGATGACCTTTTTGTACCTCGAACTCGCCCAAGCTTGCGGTCAGATGCTGGATGGAA
# Right flank :  CAAACCAAACGTAACGGCTGGGGTGGACAGAACATCTTCTCCGACATACTCAGAATACTATTTTTTCTCCGCAAAGCAAAAGCAGCGACCTTGTTCATTCAATCGAACCAGGTCACTGCTTTTTGCATGTGTGAAATTTTAATGATTTACAGCGATGTTTTGCGATTTTTCCTGAAGCTCGGCTTGGATATCGGTGAGGCATTCCAACAAAAGGGGATTGAACGCGCCGCATTCCCCGTTCCGGATCATCCGCATGGCGGTCTCGTGGGAGAACGCCTTTTTGTAGCAGCGCTCACTGGTCAGGGCGTCGTACACATCGGCCAGGGAGACGATCTGCGCGCTGATGGGGATGTCATTGCCCTTGAGGCCGTCCGGGTAGCCCCGGCCATCCCAGCGCTCATGGTGCCAGCGGGCGATGTCGTAGGCGGTTTGCAGCAGGGGTTCATCCTCAAAGTTTTCCAGCCGCCGCAGCATGTTGGCACCCTGCATACAGTGGGTCT

# Questionable array : NO	 Score: 5.50
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTTCCCCGCACACGCGGGGGTGATCC
# Alternate repeat :   CTTTTCCCCGCATACGCGGGGGTGATCC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.00,-12.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [4-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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