Array 1 583605-586464 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012410.1 Leptotrichia sp. oral taxon 212 strain W10393 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 583605 30 100.0 36 .............................. AATAGCTCCATAAATTTTAAATATTTAAACAATTTC 583671 30 100.0 36 .............................. AAAAAAAATACAATGGCTGTTTCTCTTTCATTATCA 583737 30 100.0 36 .............................. TAAGGAAATACAGGCTGTATCTTGAAACAGAAAATA 583803 30 100.0 35 .............................. GATAAAAAATATAAGAGAATATGAAGGATTATCAT 583868 30 100.0 36 .............................. TTTCTTTTCAATGAATTCAAATTCATCTGTTATGAC 583934 30 100.0 36 .............................. GTGGGAGTTTATTTAATGAACAGATAAAAAAGCAGG 584000 30 100.0 36 .............................. CCGAGTATTACAATATTTTTATTTTGCAGATCCGTT 584066 30 100.0 36 .............................. AATAAATAATATATTCTTTTGCTTTCTTTTATATTT 584132 30 100.0 36 .............................. GTTTTTGAGATTCAATATCTACTTCAGCTCTGTTAT 584198 30 100.0 36 .............................. TTATTTTTTTCACCTCCTTTCCTTTACACACATAGT 584264 30 100.0 36 .............................. ATTTCAAATGAGCTGGACGACGAACTGAGAAAACAG 584330 30 100.0 36 .............................. GTTTTTGAGATTCAATATCTACTTCAGCTCTGTTAT 584396 30 100.0 36 .............................. TTATTTTTTTCACCTCCTTTCCTTTACACACATAGT 584462 30 100.0 35 .............................. TAATCAAACATAATATTTATTAATGGTAACATTAA 584527 30 100.0 36 .............................. TAATACTTAAATCCGTCTTCCTCTTCAATTATTTTG 584593 30 100.0 36 .............................. GAGGGCGAATTCTATGGGGTAGTTGTAGCGTTCTAT 584659 30 100.0 35 .............................. TTTGTTTCAGGATTAAAATGGAGTGAGAGCATTGA 584724 30 100.0 36 .............................. ACTATAATAGATGATATGAATAAATCAAGTAAAAAT 584790 30 100.0 35 .............................. CTCTTGCACCGTCACAAAATACCCTTGAAGGTCTG 584855 30 100.0 36 .............................. TATTTATTACTGCCCAGTTCTCTTTGATGTGATTAT 584921 30 100.0 36 .............................. GAGGGCGAATTCTATGGGGTAGTTGTAGCGTTCTAT 584987 30 100.0 36 .............................. TCATTTAAAAATAAATCACTAATAACACAAGGAAAT 585053 30 100.0 35 .............................. TGTGCAGATGAAGAAACGTCAGACGCTCTCGAAAC 585118 30 100.0 36 .............................. AAAAATACTTCTCCTGATATTGACCTAACACCTAAG 585184 30 100.0 36 .............................. TAAATAAAAAAATTAGTCAAATTTTATTGACTAATC 585250 30 100.0 36 .............................. TGCTGGAAATGTTGTAAAATTTGCAGATATCAACGG 585316 30 100.0 36 .............................. GGAGGTCAACAGTTCTTAGCAGGACAGGAAATGCTC 585382 30 100.0 36 .............................. CGAAAAAAGGGGGTAAAAATGGCAAAAAAGGAAAAG 585448 30 100.0 34 .............................. ATTCATAATGATATGTGGATAATTGTCTATCGGA 585512 30 96.7 37 T............................. TATTTTGCTTTCATTTCTTCGCTGTGAAAAAGAAATG 585579 30 96.7 36 .................A............ GAATTAAATGTAAATGAAGAAAAAGATATAAAATTT 585645 30 100.0 37 .............................. CTTCTAAGGAAAAATCACTTCTTAATAATTTTACAGG 585712 30 100.0 35 .............................. AGGTGCAAGAAAAGAAATGTTGGAACAATAGTTGA 585777 30 100.0 35 .............................. CCCCCTAAGGGGGGGCGACTTAATTATATCTTTTT 585842 30 100.0 36 .............................. TAAATATCAGAGTATATCAAAGACTGGATGTAATCA 585908 30 100.0 36 .............................. TGTGTTTCTGTATTGAAATATGTTGAGCATATTCTG 585974 30 100.0 36 .............................. CTTATCTTGACACTATTATATCTCATTATTTTCTAA 586040 30 100.0 36 .............................. TTAATGGCTCTTATTTTTTAAACTTCATTTGATATT 586106 30 100.0 36 .............................. GCAAATAAGGAAACGGCAAGAGGTAAAATGTTTGCA 586172 30 100.0 35 .............................. TGGGGATTTTAGCCCTAAAGAATTTGATTTCTTAC 586237 30 100.0 36 .............................. GCTCTTATAGCTGCACTTCCGACTGGTTCTCTATAA 586303 30 100.0 36 .............................. TTAAGAATAAAATTGGAAATGTCGCCCATACTTAGA 586369 30 93.3 36 G................A............ GAAAGTGTTAATGACAGGTTTACTAATGATTATGAA 586435 30 83.3 0 G............T.A.T......A..... | ========== ====== ====== ====== ============================== ===================================== ================== 44 30 99.3 36 ATTTTAATAGTAGCAGAGTGTAATGTAAAT # Left flank : GAAATAAAGGGATGAAAGATAATATGAAGAATATTATTGAAAATTATAAAATGTTTGAAAAAACCAAGAGTGCAATTAAATTTATGAAGATTTTGTTAAAATATAAATTTCAATAACATCATATTATATTCTTAAATAAGAAGTAGATGTGTATCATGTAAATTAATACTAAATAGAGGATTAGACAATCTGATAGGAACTAAGAAAAAATGAAATATATTAGACATAAAAAAACTTTTTAAATAGGGATACTAATTTGACAACATAGTAATCGTATAGTCATTAAAATAGAAGGTGTCTAGTAATTTTCTTCTGTCGATCTTTAATAATGCCTAAATTACAGAGTTGCGACAGAAATTATAAAAATAGTTATTAATATTGTTTTTGAAGATAACTACTGTAAGAAAAATTTAAATGATATCTATTAAAAAAAACGGAAAATATAGTTCGACAGAAAGATAAAAAAATGATATCATATTTATTAAATAAAACAAAACAGC # Right flank : TATTTTACAAAATGCCCTGTTAATTAAAAGTGTAAGATATTTTAATTATAGAATTATATTAAAATTAATAATATTATTAGAAATCTAAAATGAAGTAACTTTTCAAAGAAATGAAAATGTGTTATTACATGACTAAGGCATATGAAATAAAAATGAAAACTTAAATGTTGTCTAAAATATTTGAATTAATTTAAAATTACTATATTTCTAGAGATAAAAAAATAATTTAATAATTAGAAGAGATACATGCAAATAAAATTAATATGATAAGAAATGATTTAAATAAATTTTTTTAATATTTTAAAATTCTGAAAGAAGTAAAATATAATAAAAATAGATATATAGGAGGAGACAATGGCAAAATTCATAGAAGATATTAGAAATAATTACAGAAAGTTAGAATGTGAGTTAGTCACACAGCTTAGTTATCAAGTCGAACATGATGTTACTACAGGAACAAATAGGGAAGAAATATGGGTAGATTTTTTTAAGCGTATTAT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAATAGTAGCAGAGTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 1805303-1794885 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012410.1 Leptotrichia sp. oral taxon 212 strain W10393 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1805302 30 100.0 36 .............................. TATATTGAGGCTTTTCAATCTAATGAAATTTCAGAG 1805236 30 100.0 35 .............................. GCACATACTACAAATTAACATTTAAAGGTAAAAAA 1805171 30 100.0 35 .............................. TATCTATCACATGATGCAACAAATCTATCATGCTG 1805106 30 100.0 37 .............................. TCTACTGGAACAAAAATAGATATTGAGTATGAAGAAG 1805039 30 100.0 35 .............................. ACGTTTCTTCTCTTACTTCTAAAATTTCATTTAAA 1804974 30 100.0 36 .............................. TAAAACGAAAATATGAGCTTCTGAGAGCGTATCTTA 1804908 30 100.0 36 .............................. TTTTATTTCAGTAGGTATTCAGGAGAATATATTCCT 1804842 30 100.0 36 .............................. CATTCTTTATCTCCCTTCCTAATTTTTATTTTTTTA 1804776 30 100.0 37 .............................. CAAAAATAGCATTAACAGGAAATGAAATTAATACTAG 1804709 30 100.0 36 .............................. CTGCTTCATTTTCTTTCAATATAGACACTTTAGTCT 1804643 30 100.0 36 .............................. GAACTTGCTTCGGGATTAACTCTTATCATAATGGCA 1804577 30 100.0 36 .............................. TTCCAGGCTCTTCTTTTGCATGTATTCAGCATATTT 1804511 30 100.0 36 .............................. AATAAATATATTTTTAAAAATTTCATTCCTATTCCT 1804445 30 100.0 36 .............................. TTATTTTTTATTTCCTTTCGTTGTTTTTTTACTTTT 1804379 30 100.0 36 .............................. AATAAAACTGGTCTTTTTATTTGTAAAAAAAGCATA 1804313 30 100.0 36 .............................. AAAAGCTCTAGTTTTATGTTTGAAAGTCTTCTTTCT 1804247 30 100.0 36 .............................. TTTTTAACTCCTCTGGATTTTACTTCTTTTTCCATC 1804181 30 100.0 35 .............................. GTAGTTATAGAAGCTGTTCAGTATACAGGAAATAA 1804116 30 100.0 36 .............................. GTTTAAATTAGTATCAATCGCATGAGTTATTGCATC 1804050 30 100.0 36 .............................. AAAACAAATTTTAAAACAAGAGCAAAAAGTACTTTA 1803984 30 100.0 36 .............................. TTAAATCCTGGAGTAAGAGAAGACGAAGCAAGCGCA 1803918 30 100.0 35 .............................. TACTTTGATGACATGCAAGGCGAAAGAGCTGCAAG 1803853 30 100.0 36 .............................. TCATTGTCAGACTGAAATGTGGGTGTTTTTGAAAGT 1803787 30 100.0 36 .............................. GTATTAGAAGAGGATGAGCTGATACTTACGCATCTT 1803721 30 100.0 37 .............................. ATTGACTATATTAACGGGCTAGGACGCGCTGAAATAA 1803654 30 100.0 36 .............................. TTTTCAAAAGTTGTAATCTTAACTTCCGCAGTTAAT 1803588 30 100.0 36 .............................. TCAGGAATACTAAAGATTACTGTATTATCACTCGTA 1803522 30 100.0 35 .............................. TAGGATTTCTTAATTCTAATATGTTGCAAACATCT 1803457 30 100.0 35 .............................. TTATAATAAGTCCATCATATTGCTTTACAACTTTA 1803392 30 100.0 35 .............................. TAACAATTTTGAGGTGAAAAAATGAGATTAACTGA 1803327 30 100.0 36 .............................. TGAAACGCTACAGAAAAAGCTTTCAAAACTTGAAAG 1803261 30 100.0 36 .............................. CTCTTTGTTATTTCAACTAACTTTTCACAGGAAAAC 1803195 30 100.0 37 .............................. CTAACATATTTCTCAAGGTCATCTTTTCTTTTCTGAC 1803128 30 100.0 35 .............................. AGTGAACGGATGTTCCAGTTCAGGTACTATACAGT 1803063 30 100.0 36 .............................. GTAGAAGATATTATACTTGATATAGTTGACAGTAAA 1802997 30 100.0 36 .............................. TGCATTCACTGCATTTAAAACTCTTTTCACATTGCA 1802931 30 100.0 36 .............................. TTGTCAAAATCTCTTAAGAATTCAAATGAATTGAAA 1802865 30 100.0 36 .............................. AGTCCTGCAACAATCTGTCTTTAAGTTCTTTTTTTC 1802799 30 100.0 36 .............................. AGTAAATAAACTGTTATGTAATCCAAATTTTCTTTA 1802733 30 100.0 36 .............................. TTAAATTTTTATAATCAATTCTTGTTCCATAAGCGG 1802667 30 100.0 36 .............................. GGTAAATTTTTCTCCCTCAACTGTTCCTGATTTTCG 1802601 30 100.0 36 .............................. ATCGGCCTTTGTTCTTCTACATAATCTTGTACATTT 1802535 30 100.0 36 .............................. AAAGATGAAGAAATGAAAAATTTCGTATATATTGAA 1802469 30 100.0 35 .............................. CAATTTTTTTAAGTGTCATTGTCTTATTTTTCCAG 1802404 30 100.0 35 .............................. TTTTGTATAAGTCTTTTCTTCTGCTTTCCCAGTTG 1802339 30 100.0 36 .............................. CAGAATAAGAAGTTTATGGAGTTTCTGGCAATGCCA 1802273 30 100.0 35 .............................. AGTTTTTTTATTTATAGCATTTTCCAAAGCTTTCG 1802208 30 100.0 36 .............................. TCGCAGAATACTCTCGAAGGCTTATATTCCCTGTAT 1802142 30 100.0 36 .............................. TTCTTAATTTCTTCAGCTTCTCATTGTGACTGTCCA 1802076 30 100.0 36 .............................. TCAGATAAAGTCAGATGATTATCAGAAAATATGGGA 1802010 30 100.0 36 .............................. CTTCAAGAATATCACATATAAATTTTGCTTTGTAGG 1801944 30 100.0 36 .............................. TGTGATTCCTGTTTGTAACCGCTTTTTAACGTTGCA 1801878 30 100.0 37 .............................. GTAAATCTTTATCGTTTTTAACTTTATTTCTTATAAA 1801811 30 100.0 38 .............................. GAAGAACTTAAGTTTTTATCTAAATATAACTGTTATGA 1801743 30 100.0 36 .............................. CAGGATAAGTTGGAGAGAGTAGCTAAAGCTATTGAA 1801677 30 100.0 35 .............................. GTGTCAACGGATTTTTCTTAAATGGACTTAAGCTG 1801612 30 100.0 35 .............................. TTGCTACTTCAAATCCTAATTTTTCTTCAAATGTC 1801547 30 100.0 36 .............................. AAACCTGCGGCAAATATTAAAGTCGTAAATACAGCT 1801481 30 100.0 36 .............................. TTTTATTACGTTTGAAAAACAGCATATTGTGTTCAA 1801415 30 100.0 36 .............................. ATATGTCGCTTGAAACAGAAATGAAACTTAAAGGGA 1801349 30 100.0 36 .............................. GATGTCAATAGAGCAGCAGTTTATATCAAAGAATTC 1801283 30 100.0 36 .............................. AGGATTGAATGTTATCCTTATCTGTTTCCATAAATT 1801217 30 100.0 37 .............................. GCTGATTTAATAAAATACATGTATGCGGTATGTAGAA 1801150 30 100.0 37 .............................. GGGATTGTAACAGATGGTGATGTGGAAATGAGAGTAA 1801083 30 100.0 36 .............................. GATTATACTATATTAAAAAAAGGTAATCGATATTTT 1801017 30 100.0 35 .............................. AAGTGACAGGAGAAACAGACATTACAGAAATAACT 1800952 30 100.0 36 .............................. AAAAATCTTTTTATTTTTAACAGCTTTTCCCTGTCC 1800886 30 100.0 36 .............................. TAATTATAAAATCAAGGTTTTACCCTTAACTCTATA 1800820 30 100.0 36 .............................. GAATCAATATGAAGAGGAATTTAACTATAAGATGCT 1800754 30 100.0 36 .............................. GTGGATGCTGTCATGGATGCATGGAAAATAATGTTA 1800688 30 100.0 36 .............................. ATTAAAGTGTATATGGATGTTGAGGAATCTCAGGCG 1800622 30 100.0 36 .............................. CCAGTAGAATTTATTACTTGCATTTCATCATCTTTT 1800556 30 100.0 37 .............................. CATGACACAAGAGGAACTCTTGCAAGTATTTTAGACA 1800489 30 100.0 34 .............................. TTGAAGATTCTCTCTGACTTCCAACCAGCTCCAA 1800425 30 100.0 35 .............................. GCAGTGAATCTTAAAAGCAATGGACAGATAAATTA 1800360 30 100.0 36 .............................. TACCGAAGAACTACTAGGATAAGAAGAAAATGGAAC 1800294 30 100.0 36 .............................. AAAACAAATAACTTTGATAATCCAGTTGTTGTTTTT 1800228 30 100.0 35 .............................. ATAAATTTTCTTAGACTTAAAATTCCAAAAAATTA 1800163 30 100.0 35 .............................. TAAAACTGTCTGCTTTTAATATATTTCCTTTTATC 1800098 30 100.0 36 .............................. TCGTGTCCAGGAACTATAGAATTCATTTAAATGAAA 1800032 30 100.0 35 .............................. TTATTATTCCTGCTCGGCTTTGAAACTATCTCACG 1799967 30 100.0 35 .............................. CTGGGTAGCAGATTTAATTTGGACGAGCTGAACTA 1799902 30 100.0 35 .............................. AAGAAAGGGTGAATAAAATGAAAACAATAACAGAA 1799837 30 100.0 36 .............................. ACAATGGCGGGAGACGTCGTTGAAGAAATTCCTTTT 1799771 30 100.0 35 .............................. GTCAAATATTGAAAGTGCTACTCTGTCATCTGTTA 1799706 30 100.0 36 .............................. TCAATATCATTTGGATTTTCTGTATCAAAACGTAAA 1799640 30 100.0 36 .............................. TTTCATATTCTAAGTTATATTTTTCAATAACAGCTT 1799574 30 100.0 34 .............................. TCAATGAAAAAGTTGAGGATAATAATACAAGATT 1799510 30 100.0 35 .............................. ATTTTTCACAGGAAAATGAAGTAACAGGGTATAAG 1799445 30 100.0 36 .............................. ATGACAGAAAATTCAGTAAAACGGATGCTTAAAAAA 1799379 30 100.0 35 .............................. TAAGTTTCTTATAATAATGTTGGGACTAGTTTTTT 1799314 30 100.0 35 .............................. TTAAATTTACTTGCTCCGAATGTAGCATTAAGAAG 1799249 30 100.0 34 .............................. AGTTCTTTAAGCTTTCGTGTAAATTTGTTCTGGG 1799185 30 100.0 36 .............................. TTAAGACCTGGAATAAATGCCTTAAAAAGCTATTTA 1799119 30 100.0 35 .............................. ATTGATAATTGACTGTTGACAAGATATTTTACATT 1799054 30 100.0 36 .............................. GCGTTCCAAAAATTAAATTTTAATCAGATTGGAATA 1798988 30 100.0 36 .............................. GTGAATTTGAGAATCTGCCCGATGGTGAATATGAAG 1798922 30 100.0 37 .............................. GAAGATAAAAAAAGAAAACTTGTACTGGAAACTTTGA 1798855 30 100.0 36 .............................. CACTTTAGTATTTACAAGTGTCTCTTTAGCTAGTTC 1798789 30 100.0 36 .............................. GAAACACATGTTCTGATTGGAGTTACAATCCAAAAG 1798723 30 100.0 36 .............................. TCTTTTAATCTATGTAAAAATATATCTTCCCTGTTT 1798657 30 100.0 36 .............................. TACAAAATTTCTTTCAGATATCAGAAACTCATTTTT 1798591 30 100.0 35 .............................. GATTTATCGCCGTATATACCGTTCTCAAAAGGATA 1798526 30 100.0 36 .............................. ATAATATACACAGAATATACAAAAAAAATACTCCAT 1798460 30 96.7 36 .............................C GCCTGAGGATTTCAATGCCTTGGCACAGATATATAT 1798394 30 100.0 37 .............................. GAGAGGTGGATATAAGTTCGGAACAGCAATTCAGACA 1798327 30 100.0 36 .............................. TAAAGTATGGATATTCAAGGCACTTAAAACTAAAAG 1798261 30 100.0 35 .............................. ACTCTTTATATTTTTCTCTATCTTCCCAATTTAAA 1798196 30 100.0 36 .............................. TATGAATATGCTGATATTGAATCTGATACAGTTAAC 1798130 30 100.0 36 .............................. CCGTTAAATCTTTTCTCTTAATATCACGGTAACTTG 1798064 30 100.0 36 .............................. GCCTGTTTTTATTCTAAAATTGATTTTCATAGTATT 1797998 30 100.0 36 .............................. TCTGTTGTTAAAATACTTGTGTTTAATATTGCTAAT 1797932 30 100.0 36 .............................. TTAAAAGAAATTTATGAAAATGTAAAGCCAGTTGAG 1797866 30 100.0 35 .............................. ATACGATATTATCTTTTTCAAATTTTACACCAATC 1797801 30 100.0 36 .............................. TTTATCATATTCATTATCTTTATCTAATGATATGGA 1797735 30 100.0 36 .............................. AAAAGAAACAATATAATCATTATCAGGTTTATTCCA 1797669 30 100.0 36 .............................. CTGGATATTCAGAAAATATTTACGAGAAATACTCCT 1797603 30 100.0 36 .............................. GGTCAAGATCCATAAAATACTCCTTGAACCCGAACT 1797537 30 100.0 36 .............................. GCTCTTGTTGTTATTGCAAATGCTACATTACATTCT 1797471 30 100.0 35 .............................. AGATAGTACGCTCATACTCGTTCCATTCTCGTACT 1797406 30 100.0 36 .............................. TCGGCTATATAAAAGTATTTTTGAGCAGCGGAAGCT 1797340 30 100.0 36 .............................. ATTTTTTATAAGAATAAGAAGGGTGAAGAGCAGCTT 1797274 30 100.0 34 .............................. CACTTACATGCAAATGCGGATGTCTTCCATCAGG 1797210 30 100.0 36 .............................. AGTAAAATTGAAAATCTGACACAAAGCCAAAAAGAA 1797144 30 100.0 36 .............................. TTATTATTGAACAGTCTGATCCACCAATATGCTTTT 1797078 30 100.0 37 .............................. TAAATTCAAACGTAAAATCTCCGTCATAAACTTTATT 1797011 30 100.0 35 .............................. TGCTAAACTCGGAGGCCGCTGGTATTCGGACAGCC 1796946 30 100.0 36 .............................. CCTTTATCCACACTCCAAGTTTCTTTTCAATTATTT 1796880 30 100.0 35 .............................. ATTTAGTGATGTAACTGCTGCGTTAGCAAGTATGA 1796815 30 100.0 36 .............................. TTTTTATCAGTTTTTTTGGAAGATTTCTTTTCTTTT 1796749 30 100.0 36 .............................. AAGATATTACAGATCTGTTTGGTTATAAGAGCGGTA 1796683 30 100.0 36 .............................. GCATATTTTATTCAGGTTATCGACTATAAAAAAGAG 1796617 30 100.0 36 .............................. GCTATAATCCCGAACAGATTTTGACAAGTGCAGAAA 1796551 30 100.0 36 .............................. TTTACTTTAGCTTTTACTGTAGAATAACCTATATTC 1796485 30 100.0 35 .............................. GCTTGCTGATTATGATGAAGAATATTCAGAAGATG 1796420 30 100.0 35 .............................. TGCCAATTTGTCATACCCTCTGATGACATTTTGTC 1796355 30 100.0 36 .............................. TTTAATGCTTCCTAATTTTCTATTTTATCTTCTGAT 1796289 30 100.0 36 .............................. TTTTTTAATTTCATTAATATAAAAGAAATATTAGTG 1796223 30 100.0 36 .............................. GTAAAATTGTTTAAATATCTGAAATTTATGGAGTTA 1796157 30 100.0 36 .............................. TGATAAGCATGTAATATAAAGGCTCACAGTGTTTCA 1796091 30 100.0 36 .............................. ATAATACACATAAGAGGTAAGTATAGAAAAGAAAAT 1796025 30 100.0 35 .............................. CTGAAAACATATTTATTAAATATATCACTTTTCAA 1795960 30 100.0 35 .............................. ATAATTGCTACAATACTTTTTGAAGAGGGTAGTAG 1795895 30 100.0 36 .............................. GTACCTGAAAAAGGTCATTTATTGACTAAAGTTATC 1795829 30 100.0 35 .............................. GTTTTTATTATTAAATTTTCTTACTGTATATTCTT 1795764 30 100.0 35 .............................. AAATGTAAAATCTCTTTATATGGCAATATCCAAAT 1795699 30 100.0 36 .............................. TTTTTGATAGTAGATATGAACGAAAAAAATTCATAT 1795633 30 100.0 35 .............................. CTAAGATGTCCGATAACGTATACTCTTTCTCTGTG 1795568 30 100.0 35 .............................. CTTAAAGTTACTTCAATAACAGTTGAAACTGGAAA 1795503 30 100.0 36 .............................. ATTTTAGGGTTAGTATTTTGTTTTTGAAGTCCTCAA 1795437 30 100.0 35 .............................. TCAAATAAAGCATAAGTAACTAAAACATCATAATT 1795372 30 100.0 35 .............................. ACTTCTCAAAGTTACGGATTTGAAGCTGCACTTGC 1795307 30 100.0 35 .............................. AATAGAGCCGTTATCAGAAATTGCACTTGTGAAAA 1795242 30 100.0 35 .............................. TTTGCTTTATAGTGCTTTGTTGTGAGTCCTCGACT 1795177 30 100.0 35 .............................. GAATGATTGGCAAATTCACTTGCTAAATCAATTCC 1795112 30 100.0 35 .............................. ATGATAAAATAATTCTCAAACATAGTACCATCACT 1795047 30 100.0 35 .............................. TGGTCTCGAGGGGGTAGGAGGTACTGTCTGAATTG 1794982 30 96.7 36 ..........C................... ATAGCTTCAGCTCCTTTATCAAATGAAGATACATAA 1794916 30 96.7 0 .........T.................... | TA [1794892] ========== ====== ====== ====== ============================== ====================================== ================== 159 30 99.9 36 GTATTAATAGTAGCAAAGTGTATTGTAAAT # Left flank : TTAAAATATGGTGGTAGTATGTATGTTATATTAGTATATGATATTTCAACAGATGACAATGGAGCAAGGATTTCTCGTAATGTTTTTAAAATTTGTAAAAAATATTTAACACATGTTCAGAAATCAGTTTTTGAAGGTGAAATAACACCAGTATTGTTAAGGAAACTTTATTTAGAATTAAGGAAATATATTAGAGAGGACAAGGACTCAGTCTTATTATTTAAAACAAGGCAGGAAAAATGGCTTGAAAAGGAATTCTGGGGAATGGAAGATGATAAGACTTCTAATTTTTTTTGATAAAAAATTTTTAATCTGTCGACCTTTAATAATAAAAAAACTTCATGGTATCGACAGAAATTTTGAAAGTATTATTGTAACTGGTTTCGAATTTATTATTAAAAATATAAGACTTAAATAGTATCATTATTTTTTATGAAAAATAATAGTTCGACAAAAAAAGAGAAATATGATATTATAAGCATTGAGCAAAATGAGTAACT # Right flank : GAGGAAACAAAAGGTTTTGAGACTCAGAATATTGATGAAAGTGAAATAGTATTGGCAAGAGGAAATGAAATAACTTTTAAAAAAATTGAATTAAGTAGAACTCATATTGTGATAGAAGCAGAAATAGGAAAAGTGAAATAAAATGTCGCAATTAATATTGCAATTTAGGAGTGAAAATAAAAAGTTAATAATGAAATAAATTTAAATCTATTAAATCTATATTTTAAATTAGTTATTGAAAAACAATAAAAAACAGCTCTAAAATAAAGAATAACCTATTCAAAGTTTAAGAGCTGTTATTTCCATCCTCAACCAAAATCTTAATAATTTTTATCCAGTAACCCCACTACACTTCTGACTTCATCCATTTTTGCAGTGGCGATTGAACGGGCTTTTTCAGCACCTTTCCGTAGGATTTCATAAACATAGTCCATATTGTTTACAAGTTCTTCACGTTTTTCCCTGAATGGAGCAAAATAATCCATAAATTTATCCAGTAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGTAGCAAAGTGTATTGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //