Array 1 39425-40697 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBOL010000025.1 Erysipelatoclostridium ramosum strain MSK.23.19 INBFOMJE_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 39425 30 100.0 33 .............................. AGATTCTGATTGAATATGATGCTGTTTTAAACG 39488 30 100.0 36 .............................. CAGACTGGGCAGATAGCTACTTATAAAGAAAAAACG 39554 30 100.0 36 .............................. AAAATTTCTAAAATTCTGTTTGTTTTAACGATGATC 39620 30 100.0 36 .............................. CCCTATAAATGCAGGGGTACCTACTAAACCACCAGC 39686 30 100.0 36 .............................. GTTTGTCAATGTTGGAGCAGATGGTGAAGGCGGCAG 39752 30 100.0 36 .............................. TGACCAAAAGTTGGAAATACATCTCTAATCGCTCCT 39818 30 100.0 36 .............................. ATGGAATCAATAATTGTTGTTCCATTTGATAATTGG 39884 30 100.0 35 .............................. CTGAGACTGGAACATGATTTATAGATTTCAACAGA 39949 30 100.0 35 .............................. GATAATTCTTCAATCAATGTTTGGTAATCATTGAT 40014 30 100.0 35 .............................. ATGACCACAAAGACACGCTCGGATTAGCAGTATAC 40079 30 100.0 36 .............................. TATGACGGCTATGAAGAAAATATTACTGTAACAAAT 40145 30 100.0 34 .............................. GGTAAAGGAAGCAATGATGATACAGTAAAACTGC 40209 30 100.0 35 .............................. AGGTAGGTGTCTGAACACGTCCAATTGACAATGGT 40274 30 100.0 35 .............................. TGTATTAACTTATAGTTATCTATAGTAGAGTCTAA 40339 30 100.0 37 .............................. CCTTCACGTTTATTGCTAGTTATACCATTTTTTCCAA 40406 30 100.0 35 .............................. TGACATTAGCAATTGGGTCAAGTAGGGCCTTTACA 40471 30 100.0 35 .............................. ATCCAAGGTGAATTAGGTAATAATCTGCTTTTCGC 40536 30 100.0 35 .............................. GCATTAGTTTTCTTAATAAAGCTGACCGGATCCAT 40601 30 100.0 36 .............................. AACATTTCTTTAGCGCTTAATTCTTCTATCATTTTA 40667 30 73.3 0 ..............G.TAT.AA.G.....A | G [40680] ========== ====== ====== ====== ============================== ===================================== ================== 20 30 98.7 35 GTTTAATAACAACATAAGATGTATTGAAAT # Left flank : AAATTATTTATACCATTTTCTATAAAGGATAAATATTAATGAAAATAAAAAATCATAACTATGTAATCGTCTGTTACGATATTGGGGAAAAAAGAGTAAATAAAATATTTAAGATATGTAAAAAATATCTTCCTCATTATCAATATTCTATTTTTAAGGGTCCTATTACCCCTTCTAAATTAATTTTATTAAAAAAAGAACTAAAAAAAGCTATAAACAAAGAAGAAGATTGTGTAAGTATTATTAAATTACAGAGTGAGGATTCATTTGATGAAGAAATTTTAGGGAGTCAAAAAGAGGGAAATGAAGATAGTTTAATTATATAATTTACCAGGCTCAATTTCTTTTTAATGTCCTAAAACTGTTGGGAGAGTAAGCGTTTAAGAGAATTTTACTAGCAATTATAAAAAAGTAAAATCATTTGGTAAAAAAGTAGAAAAGTATTGATAGATATAGGTTTTGAGGTATAATAGAAAGTGTAAAATGGCTTATTTACTAGG # Right flank : AAACATGACTATTTTGTTCATATTACTATTAATAAAATATTTTTTTGTTATAATAAAAGTAAAAGTAAGTAGAAGTGGGGTAATTATGACAAATAAGTATAGATTAAAAATAATATATAAAGATACTAAATTGACATTAGACATTGAGGAAAATATTACTTTTGATGAATTAAGCTCAATTATTAATGAAAAATTAATGCTAAGTGATTCGAGAGCTTATAAATATCAAAAAGATGATGATATTATTGTTACAAGAAAAAATAGTAAAAACAATAAACTAGCAGATCTTTTAGAATTAGATCAGAAGTTAGTTTATATTATTGGTACTGGTAATAATGTTTATAGTATTAATATCATCGTTTGGGACTACATTATTGAAGCTGATAAAAAAATATTAGAGAAGTTTAATCAAATGTTGAAAAATGTCAAACAAGTACGTCCTGAACAAGTATATTATTTAAATAGTAGTCAAAGAAAGTTTATTGACGGTCTTTTGGCTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATAACAACATAAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //