Array 1 8418-9970 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSJG010000042.1 Klebsiella aerogenes strain KCJ3K542 NODE_42_length_47287_cov_8.746353, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8418 28 100.0 33 ............................ TTGAGGTAATGGCGCAGTCTTCACAGCAAACAC 8479 28 92.9 33 ......................G.G... TTATCCTGCTGCCAGCCTAAGCGCCCGTAGTTT 8540 28 100.0 33 ............................ TAGTTTGCTCTGGCAGCATCGATTAAAAATTTT 8601 28 100.0 33 ............................ CTTATCAACCTCTATCGCTGAGGGGTCAGGCGC 8662 28 100.0 33 ............................ TATTGTCCCAACCAGCGCCCTCTTTCGGGTACA 8723 28 100.0 33 ............................ CGTAGCCAGGCTTGCTCGTACACCTCAAGACGA 8784 28 100.0 33 ............................ TTGTAGAAATTAAGACCTGCTATATCCTGTAGC 8845 28 100.0 33 ............................ TCAACATTGCTGAAAAAGCTGAACGACGGAAAT 8906 28 100.0 33 ............................ TTCCGGGTTGGTGATGATGATCATATCGGTACC 8967 28 100.0 33 ............................ CCGGGGAATCTACTGCCTGAAGGGTTGAGCCAA 9028 28 100.0 33 ............................ TAAATTTTATCGTCGCGGTCTTTGTGGTCGGGG 9089 28 100.0 33 ............................ CACACACCAGGAGAAATAAGTGTCGACTATTGG 9150 28 100.0 33 ............................ CACCGATTGATGCCGCGCCGTAAGCACGATTGA 9211 28 100.0 33 ............................ TTTATCGACTGGTCGAAAGATGCGCTGCTCACT 9272 28 100.0 33 ............................ CGGTGAACGCGTTGCACTGCGTAGCGGTGGCGT 9333 28 100.0 33 ............................ TCCGCTTTAACAGCCAGCGACGCCAGCGCGTAT 9394 28 100.0 33 ............................ TCCTCAAGTGGTACGAGGACGGCGACAATAGCG 9455 28 100.0 33 ............................ TAATTACCGCGCCTTGCGGGACGTAGGTCTCGG 9516 28 100.0 33 ............................ TGAGCACGGGCTGACCATCAGTTTTGCTCGCAA 9577 28 100.0 33 ............................ CAATTCACTGCGCTTGATGGCAAGGTGGATGAA 9638 28 100.0 33 ............................ CGGGATTATCTCACCCTCAGAGAGCGAATCGCC 9699 28 96.4 33 ............T............... TTGTTTTTCTGCCTGGGGGATTGTGCCGCCTGC 9760 28 96.4 33 ................A........... TGGACGGCGACGTTGATCCAACCTGGTACCCTG 9821 28 96.4 33 ...........A................ TACGGCACCGAATCGCAGCTGCTGGCTCAGGTT 9882 28 96.4 33 ...................A........ CGATGAATGGCCAATGATGACGGCATCCCAGTC 9943 28 96.4 0 ..............G............. | ========== ====== ====== ====== ============================ ================================= ================== 26 28 99.0 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAGCGGCTCTGTATCGATCTGGCGTTTTCGCTGTCGAGGGAGATGGCGGGGCGATACGATAAACATAAAGTTTCTGAGGCATTCAGAAAACGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATTAATGAGCTAATGGGAGGAAAACGTGCTCGTCGTACTGGCAAATGATTTGCCGCCAGCGGTTCGAGGGCGAATGAAACTGTGGTTTGTCGAACCCCGGCCGAACGTTTTCGTCTCAGGCGTCAAAGATTCGGTTGCGCAAACCGTCGTTGATTACCTGATGCAGTACACGCCCGCGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGCTATGAAATTCGCTACAAGGGCGAGGTCAGGAAGCCGATTATTGAGGTCAGTGGGTTACAGCTTATTATTGAGACCCTAAAACTGTCGTAATACATGGATATAGTGTTTTAATTGTCGCTCTTTCACAATATATTGGT # Right flank : CCAACTTCGACTGCGTTATCGCCCGTAGTGTGGAAGCTTGCTCCCAGCAGGCAAGGCGTTTTATGGGTTTTAGCCGTCTGCCAGATGACACACCGCTTCGATATTGTGTCCATCTGGCGCAATGACAAAGGCGGCGTAGTAATTGGCGTGGTAATTAGGCCGCAGTCCCGGCGCGCCGTTATCCTTGCCTCCGGCGGCCAGCGCCGCGTGCCAGAAGGCATCAACCTGCTCGCGGCTGTCGGCGCAAAAGGCGATATGCAGCGGCGCGGGTTTATCTTCGCTTTGATAGAGGCATAAAGAGGCATCGTTCGCCCCGGCTAGCTCCGCGCCGTAAGCCGGCTCGCCTTCGCCTGCCAGCGTCACGCCGAGCGGCGCCAGCGCCTGTAAAAAGAATGCCTTGCTCGCGGCATAATCACTGACGCCAAATTTGACATGATCGAACATAAATTCTCCTCGGTATTGGAAATATCTGTACGACATCACCGTGTCGTTAAAATGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 59484-57560 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSJG010000016.1 Klebsiella aerogenes strain KCJ3K542 NODE_16_length_68418_cov_8.452637, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 59483 29 100.0 32 ............................. GCAACTTCTCTTTATCGACTCCGTCAGCTTAC 59422 29 100.0 32 ............................. CCGCGTGGCCGCGATGGGGTGAATAACCAGAA 59361 29 100.0 32 ............................. TAATGACCTGCTGACTGCAATTGCGCTGGGCA 59300 29 100.0 32 ............................. TTGAGGCCTCACCGGGTGAAATTCAGGTATTG 59239 29 100.0 32 ............................. TGAATACTGGCGAACTGGTGCTGGTCGATACG 59178 29 100.0 32 ............................. CGCCGGGCTGATTTGCCCGGAAAGAACGGCGG 59117 29 100.0 32 ............................. TAACGGTAAATACGGCCCTGAATCCAGTGTGG 59056 29 100.0 32 ............................. TTCATTAAGCGTGTCAGCAATGACTATCTAAT 58995 29 100.0 32 ............................. GCTGTGCTGCAGGTTATTTTGTATATGTTACA 58934 29 100.0 32 ............................. TGTCGATAGCCATCAAAAGTGGTATAACCTTG 58873 29 100.0 32 ............................. GGGTATGCCCGCGCCACGGTGAGATTGTTATG 58812 29 100.0 32 ............................. CAGGTCCGTTTAAAAATCTCGACACGCGGCGC 58751 29 100.0 32 ............................. GCAACGTTAATTACGCAAAACCAGGTGTCACT 58690 29 100.0 33 ............................. CCAATAGCGCATTATTACCAGAATATCGCAAAC 58628 29 100.0 32 ............................. GCGGAGTGGCTGGAAACGGTTGTCCGGCCTGA 58567 29 100.0 32 ............................. GCCTATATGAGTGACCGCGACGGGTCTGTTCG 58506 29 100.0 32 ............................. GTTACGTAGGCGCGCTGCTCAATCAGCCTGAT 58445 29 100.0 32 ............................. GGCTTAAGAGGAAAGAGATAACGTCATATACT 58384 29 96.6 32 ............................A TACAGACGCGGCAACCAATGCGCTGACCTGGC 58323 29 100.0 32 ............................. GTGTGGTAATTATTGAGACGTGCTACGCCAAA 58262 29 100.0 32 ............................. AGTGATTCTCGTGCACTATCAAAGCGTCTGGA 58201 29 100.0 33 ............................. TTATTCAGGAATTCTATTGTGTCTTTTGCTTGC 58139 29 100.0 32 ............................. AGACAGCCAATAAATGGCTGCCGCAGCTGATG 58078 29 100.0 33 ............................. TTCGGCAACGAGCGCAACGACTATCTGATCAGC 58016 29 100.0 32 ............................. ATATGCAGGATATTAAAAATTTCAAACCGGCA 57955 29 96.6 33 ............................T GCGGTGGATAAAGCGCAGGTCGTCATGGGGGTC 57893 29 100.0 32 ............................. GCAGGAAAATCTACAGCCTTCCTACATAGGAC 57832 29 100.0 32 ............................. ACGCGCTACAACGTCCAGCACATCGCGATTGA 57771 29 100.0 32 ............................. CTCATTCAGTATCTCGGTCATTTTGTCGGCGG 57710 29 100.0 32 ............................. GGTAGGTAAAAACATGCCTCATAAATTATCGA 57649 29 100.0 32 ............................. TATTTCCCCTCGGTTGAGAAAGAAGTTAAGGA 57588 29 93.1 0 ............T.........C...... | ========== ====== ====== ====== ============================= ================================= ================== 32 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGTTGTCGGCAGGCGAAATCGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCAGCGATACCTGAGCCTGAATCAATGGGGGATAGCGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTCCCTCCTCGTCTGCGGGGGCGGCTTGCCATCTGGCTGCTGGAGGTTCGGGCGGGAGTCTACGTTGGCGATACCTCAAAGCGGATCCGGGAAATGATTTGGCAGCAGGTGATACAGCTTAGCGATTGCGGAAATGTGGTGATGGCCTGGGCAACGAACAGCGAATCTGGTTTTGAGTTTCAAACCTGGGGAGAGAACCGCCGCATGCCGGTAGATTTGGATGGCTTACGACTGGTGTCATTTCTTCCCATTGAAAATCAATGAGTTGAATGTTCTTTAATAATATGAAATTGTTGGAATAAAGTTGGTAGATTGTTGGTGCCTTAAAAAGGCATTAAAAAACAGTAATATATGTTTAGA # Right flank : TAGATTTGTTTTAGGTGACGATTGCCACTTCTCATTCCCATTTCATTCTCGACTCTTTAGCTTTCCCCACTAACCTTTCGCTCAGAAAAATCCGGAGATGGGCACTGTCGGCCAAATTTCTCAGCCCAGGGGAATGGCGCCCCGTTTTTCACGTAAAGCTGGTACAGCCGCTTAACCGATTGTTGGTCGCTCGAGACCCAATTGCTGGCATTGCAAAGTATAGCGGCATAAGCCTGAGATTTTCGCGGTAGCAAACTGGCTGCTTTTTCAGCAAGTTTTGCCGCCCTCCAGCGATAATGCTCAACATTGTTGAATGGTTTGGGTCGTGAATGCTGTATTCGATATTGCTCCTCGCTACCAACCCAGGAGTGTACTCCAGAGATATTGTTTGTGGCGTCTGCGCAGGACAGGTACGTATTTGCGTCACTTAAATACTTTTGGTCAGGCTCCAAAAAATAGCTCATCAGGTTGTTGCCATGCTCGCGTAGAATGACCGCAGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //