Array 1 4179-4510 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOTI01000072.1 Halanaerobium salsuginis strain ATCC 51327, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 4179 37 100.0 36 ..................................... TTTCATCTAATACATCGGCCACTTTTCTTAATTCTT 4252 37 100.0 38 ..................................... TGGTTGGTAACATAACCATCGCTTTTGCTTTTTGGATG 4327 37 100.0 35 ..................................... ATCATATGTTAGACGAGATTGAAGATTCAAACCAT 4399 37 100.0 38 ..................................... GGCAACTCAAAGCTGATGGTACTTGGTTAGCTGATGGG 4474 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 5 37 100.0 37 GTCTAATGACTAAATCCATTACAACAAGGATTGAAAC # Left flank : TTACTCATACCCCAGCTTGTATTTCTAAAGTCATTTGCTGAAACACTGCAGCTAATAATTAATAAAAAAGCCAATACTAATAAAGTAGTTTTTTTCATTTTTTTCATCCTTTACTGATATATTTTGAATAAGTTTAGCTTTGATGAAATAAATATATATTAATATAAATTCTATAAAAAAAGAAATTTAATTTCAAGTTAAAAATTTAATAAATTATTTTATTTTGAAGCAGGAATTAAACTTTAAAGATTGAATATAGTTTATAGTAGTAAGTAATAAATTTTTAATTAATTAGTTAAATTCTGAGGCAAATTTATTTGCTTTACTTTTTGCGAACCTTGATAACTGCAGTTACATCATATTTGGTCAGGATGGTCAAAGTCGCGGCATTTAGCTAAAAAAGACTGTTTTTGCAGTCAAAAATCATAAATTTTAGCCGAATAAATTTCTAGACAAATAGCTGTGGTAACTGTTATAACAGGAAGGTTGCTTAAAAACGG # Right flank : CCTAAAACAACTGATTTAACTCAGGAACAATAGCTAATGAAATAGGAATAACTTTTCGAAAACAATTGCCAAGGAAAGCTCAAAATTATCTCTGGCAGCAGCAGTTAATTAAATTAATTTTAAATTGAGCTTGACAATTATTAACTACGTTGATATAATACAAAATGTCGCAAGTAATAAACGACTTTGCAAAGTACATTTTTTGAGTGGAGTTGTTTTGTTAAAATTTAATATGGTGGATGTAGCTCAGTTGGCTAGAGCGCGGGATTGTGGCTCCCGAGGCCGTGGGTTCAAGCCCCATCATCCACCCCATTAAAACACCTGTAAAGGTGCTTTTTTTATGCAATCTTGATTTGTCTATTTAATATTTATCAACCTGTTTTAAATAGATGATAAATAAATTTAGTTTAAGAATGTAACTTTAACTTGTAATTTAGATATGCTATAATATAATTACTCTATGTTGACTATAAGTCAATAAAAAGTGGAGGTAATCAAGA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAATGACTAAATCCATTACAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 45633-45961 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOTI01000020.1 Halanaerobium salsuginis strain ATCC 51327, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 45633 37 100.0 36 ..................................... AAAGCTTCAATAACTGGTGCTAAATAAGGAACTCCA 45706 37 100.0 38 ..................................... TTGATCTAAAAGTTTCAACACAAACTGAAATTATCTTA 45781 37 100.0 36 ..................................... AACTGATTTTGCATATCCTCGCTCATTTGCTTAGTT 45854 37 100.0 34 ..................................... TCAAAGCTATTTGAATATCCAATCTTTTCTTCAG 45925 37 94.6 0 ...................................GT | ========== ====== ====== ====== ===================================== ====================================== ================== 5 37 98.9 36 GTCTAATTACTAAATCCATTACAACAAGGATTGAAAC # Left flank : CTCGTTTCCCGCTCCAGCGCCCGTAGCTCAGCCCGGATAGAGCAACGGACTTCTAATCCGTAGGCCACAGGTTCGAATCCTGTCGGGCGCGCCATTTAAAAGACTTACATGACAGCCTTTGTGGCTGTCTTTTTTATTTTATTAAAAAATTTTATTCAAAGCAACAAATTAATGTTTAACTATTAATATATTATTTTTAATTTTGCAGGATTTTTTTATCCTGGCTTGAAATAATAAGTAGAAGTAAATTATATTTAATTTCAGGTTAGTTTATAGAGTTTTATAGTTAAATTTATTAAATTCTGAGGCAAATTTATTTGCTTTACTTTTTGCGAACCTTGATAACTGTAGTTACATCATATTTGGTCAGGATGGTCAAAGTCGCGGTATTTAGCTAAAAAAGACTGTTTTTGCAGTCAAAAATCATAACTTTTAGCCGAATAAAATTCTAAGCAAATAGTTATTATAGCCGTAATAACAGGCAAGTTACTAAAAAACGG # Right flank : TTTAGCGGAATGTTCTTGAGTAGTATTGATCTAATAACTAAATATGTCATAATAAGATAATTTTAAATTGATGCCATCCAAATCAGGATGGTATTTTCTTTTTTTATGGACATAATTACTTAAATGAGATAAACTTAAGCTAAGTTATTTTTAGCAAAGGGAGGTTCTAATATGGGATATACCTTGATTACAGGTGGTTCAAGTGGGATAGGTTTTGAATTGGCACGTACTTTTCTTAAACATGATCACCGGGTTATTATTGTTGCATCACGTCAAGACAAGCTCACAGAAGCTCAAGAAAAACTACAGAACGAATTTGGTCGAGAAGTATTAATTTACCAACAAGATCTGGCAAAGTTAGGAGCAGCTGCAGAGCTTTACCGCCGCTTAAAGTCTGCTAATTTAAGTATTGAAATACTGATTAATAATGCTGGAATTGGTAAAATAGGTGCAACAGAGAAGATAGATTTTCAGGATGATGAAAAAATGATGATTTTAAA # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAATTACTAAATCCATTACAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 31211-29926 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOTI01000022.1 Halanaerobium salsuginis strain ATCC 51327, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 31210 37 100.0 37 ..................................... ATCAACCTTCAAAACCAGCTTATCTGGAAAGAATATT 31136 37 100.0 36 ..................................... ATTTCTGGCCCGGTCATCGGTTTTCTCCTTCTCTTT 31063 37 100.0 37 ..................................... TTGAAAGCCTGAGCATAAAAAGTAAGTGCAGGCGTTG 30989 37 100.0 38 ..................................... ATAATATATTTATCCGGCTCATCGATTTGTATTTCTTT 30914 37 100.0 36 ..................................... ACCATGGCTTCAACAATAAGCTCAGTAAGAGTATTC 30841 37 100.0 35 ..................................... ATACTGACTCTAATTTCAATATAGCTGAATATATG 30769 37 100.0 36 ..................................... AGTTTCCGAAAGAGAGCGATATGGATACCGAGCAGA 30696 37 100.0 37 ..................................... ATATCAGGGAAACATCTTCTGAAGCTTGGTTAAATTA 30622 37 100.0 35 ..................................... CTCCATGGTCTGGCGATGTCTGGCAAAACGATATA 30550 37 100.0 38 ..................................... TTTTTCTTCAAATATTTCTTAAAGCTTTCGGCGTCAAC 30475 37 100.0 36 ..................................... ACTTAAATTTAAACGGCAGCGGTGGCGGCGGATTAA 30402 37 100.0 37 ..................................... AGCAATAGACTATTTTAAGTAAATCATTTGAAATTTT 30328 37 100.0 36 ..................................... TTATTGTCATAAGTGAAACTGACCTTAATTCCAATT 30255 37 100.0 36 ..................................... AAAAATTGGAAATAGAAATTAAAAGGAGATGTTAAT 30182 37 100.0 37 ..................................... ATGTAGACATAGCAGGTTTACCACCATCTATATATAG 30108 37 100.0 37 ..................................... CTGTTTTCTTCCTCTTCTTCATCATCTTTCTGATCGT 30034 37 100.0 35 ..................................... ACATTTCTCATTTTCGCCCTCCCAATAATCATAAG 29962 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 18 37 100.0 36 GTCTAATGACTAAATCCACTACAACAAGGATTGAAAC # Left flank : GTTTATAATGTTAAAGTGTCCGTAAAAGGGGTCATAGCTCAGCTGGATAGAGCAACAGATTCCTAATCTGTAGGCCGGCGGTTCAAATCCGCCTGACCCCACCATCTATAATGCTTGATATTTCAATGAAGATGCTTAAAGCCCGCCGTTTATTCGGTCGGGCTTTTTTCGTTTTTGTAGCTATATTTTTTGATTATTATTTAAGCAGTTAACTATAAGTTTAATTTAAACTTGCAATTATTAAAATATAATGTAAAATAGTATTATAATATATAATTTATATTTAATTAATTAGTTAAATTCTGAGGCAAATTTATTTGCTTTAATTTTTGCGAACCTTGATAAATGCAGTTATATCATATTTGGTCAGGATGGTCAAAGTCGCGGCATTTAGCTAAAAATAACTATTTTTGCAGTCAAAAATCCTAAATTTTAGCCGAATAAATTTCTAGCCGAATAGTTGTGATGACTGTTATAGCGATAAGGTTGATCAAAAACGG # Right flank : TATAACAAAATATCTTGATAATTATATAACAGGTTGGTATAATATAATTATTATTAATTTGTATAATATAATTTTAATAATTTAAAGTTATAGATATTGTAAGCTCAGCTTTTAAAGTTGGGCTTTTTCTGTTTGATTTACTATAATTTTTAATTATTAAAATCGGTATTTTAATTAGGAGGTGAGCGGAATATTAAGTAAAATATCTCATTTACTTAGGCCTAAAAGATCAATTCGCAGTCGGATAATTAGTATTTTTATTATAATAATTATTATTCTTAATATAGTGTTTTTCTTTTCCTTTATCAGACGAGATCAAGAAATAAAAATTTATCAAAATAATGTTGACATCAATTTTAAACTAAATCGTCTTTCTTTAGAGATTACAGAAAATTCTCGTCATTTTGATCTTTTATTCCAGGAAAGAAACTCAGAAAATAAGTTAATTTATCAAAATTCAAGAAAAAAAATAGATAATTTAATGGCAGAAATTAAACCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAATGACTAAATCCACTACAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA //