Array 1 4305892-4302147 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019160.1 Klebsiella pneumoniae strain GN-2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4305891 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 4305832 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 4305771 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 4305710 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 4305649 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 4305588 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 4305527 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 4305466 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 4305405 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 4305344 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 4305283 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 4305222 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 4305161 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 4305100 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 4305039 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 4304978 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 4304917 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 4304856 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 4304795 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 4304734 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 4304673 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 4304612 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 4304551 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 4304490 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 4304429 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 4304368 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 4304307 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 4304246 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 4304185 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 4304124 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 4304063 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 4304002 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 4303941 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 4303880 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 4303819 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 4303758 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 4303697 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 4303636 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 4303575 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 4303514 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 4303453 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 4303392 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 4303331 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 4303270 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 4303209 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 4303148 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 4303087 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 4303026 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 4302965 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 4302904 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 4302843 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 4302782 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 4302721 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 4302660 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 4302599 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 4302538 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 4302477 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 4302416 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 4302355 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 4302294 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 4302233 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 4302175 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 62 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //