Array 1 32-545 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGYCK010000019.1 Klebsiella pneumoniae strain MRSN581745 MRSN581745_contig00019, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 32 29 100.0 32 ............................. ATTCCTGCGGGACCTGATAATAAAAAGGTCAG 93 29 100.0 32 ............................. TACGATAACGCGCAGCAAACAGGCTATATCAC 154 29 96.6 32 ............................C GGTCCAGTTTGGTTCTTTAGGGCGAACTACCT 215 29 100.0 32 ............................. AAGGTACTCCATGTTTTTCATAAGCGGTATCA 276 29 100.0 32 ............................. TTTTTTGGTACAGGTGGGAATACAGGCAACCA 337 29 100.0 32 ............................. GCGGGAGTGCGAACCGCCGTCCCCGTTATTGT 398 29 100.0 32 ............................. TAACAGGGCCATTTTCCCGGGTTGCCAGACGA 459 29 96.6 29 .........................G... GGGTTCACTTGGGTGAAACTGAACTAACT 517 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 9 29 96.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGGCGGGTTGACCAGATCGGCGATCTGCCCG # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 216971-217609 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGYCK010000018.1 Klebsiella pneumoniae strain MRSN581745 MRSN581745_contig00018, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 216971 29 100.0 32 ............................. CCTCAATATTGGGATTTACTGATTGAATTGCG 217032 29 100.0 32 ............................. GCACACCTCAAAATACTGTTAATATATACAGT 217093 29 100.0 32 ............................. AACCGGTAAATTATTAAATGTTGGTGCGGCCT 217154 29 100.0 32 ............................. CATGGCTTACGATCAGCTGGCTGAGCGATTTG 217215 29 96.6 32 .........A................... TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 217276 29 100.0 32 ............................. AACTGATAGCACATCGCCTCAAGCTCTGTTGT 217337 29 100.0 32 ............................. GCAATAACGCCCTTCGGCATCACGCCTAACAA 217398 29 100.0 32 ............................. CCTGGCGGGGCGGTCTTCTTTTCTGGCCGCCG 217459 29 100.0 32 ............................. TCACTACTGCAGCCGCCCTCACTGCAGCACCG 217520 29 100.0 32 ............................. ATTTAAAATCTCCATTCAGTTGTGTTCGACAA 217581 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 11 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGGCCGTCTGTGGCTGACGCAGCGCGTTTTGCGACAGCAGGGGGCCATTCGGATGCCACAATCTGCCCGATTATTGATTGAATCCGTCTACGGGGAAGATATCGCTATTCCCGATGGTTTAGCCAAAGCCGAGCAAGCGCAGTTGGCAAAATATTACTGCGATCGCGCGTTTGCTCACCAAATGCTCCTGAACTTCAAGCCGGGATATAGCCCCGATAGCAGTGATTTCCTGGCTGACAAGCTCTCTACTCGCCTGGCAGAAGAGTCGATCACGCTGTGGCTGGCGAAAAACGTCGATGGACAGTTGCTGCCTTACGCCTGCGGCGCGCATCAGTGGGAAATGAGCATGCTGCGGGTGCGGGAAAGCTGGTGGCGTAAACACAAAGCTGAATTCACGCTCCTGGCTGAAAAGCCGCTGCAGCAGTGGTGTGTACAACAGCATCAAAACCCGGATTTCGCCGTGGTGATTATTGTTACAGACTCGCCGGATTGCGGTTATT # Right flank : G # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //