Array 1 98034-95256 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDMO01000002.1 Halomonas borealis strain ATF 5.2 NODE_2_length_282730_cov_35.711905, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 98033 29 100.0 32 ............................. CGATGAGAAGGTTTTAACAGATAATCCGGCGA 97972 29 100.0 32 ............................. TGCTCCGAAAGGGTGAATGCGGCCATTGCCTT 97911 29 100.0 32 ............................. TGCTGACCGTCGCGGTAGCCTCGAGCCCATCA 97850 29 100.0 32 ............................. TTCACGCTCTATGCCGAGTCGATCCGCAATTT 97789 29 100.0 32 ............................. ACTGTGCGTTATAATCCTGACGATGTTTACCG 97728 29 100.0 32 ............................. CGTGAAGAATTGGCTAACGCGATTTCGCTAGA 97667 29 100.0 32 ............................. CTGTATCAATTGATTGCTCGTCAGTTCATCGC 97606 29 100.0 32 ............................. ATACCGCGCGCTATCGACCTCGCCCGCCATGC 97545 29 100.0 32 ............................. GTTCCGGTGTTCTACCCGGGCACCAAGATGAA 97484 29 100.0 32 ............................. CTGCAATATCCCGACACGGCCTTGGTCGGCCT 97423 29 100.0 32 ............................. CCTCCAAGGGATGCGTCGAAGCCCATGATGAG 97362 29 100.0 32 ............................. CAGGTGTTGATGGCCATGTCGGAGATCACCGG 97301 29 100.0 32 ............................. GCATTCAGGTGGCCAGCGCCTGGTTGGCCGAC 97240 29 100.0 33 ............................. TCTTGATTAGGCGGCTCTTCTGTAGCACCTCGC 97178 29 100.0 32 ............................. GTAGATATTCGCCCCTTCGGTCGCCGCGTTCT 97117 29 100.0 32 ............................. CTGCTGGAGCAGATTCACGAGCAGATGGTGGA 97056 29 100.0 32 ............................. TATGTGCCGGCCACCAGGGGGCAGGTGGTGGG 96995 29 100.0 32 ............................. TGGTACATCCCGCCTGCCGCAGCTCCGGCGAT 96934 29 100.0 32 ............................. ATGGTGGTCGACACCCTGGCCGATGTGGTTCG 96873 29 100.0 32 ............................. TCTCACAGCGGCGACGCCTGGGCGCTGACGCG 96812 29 100.0 32 ............................. CGGTTAGCTGGGCGAGCGATAGGCGGGGAAAA 96751 29 100.0 32 ............................. ACGAATGTGCTATCTGGATTTGCGCCCCTGGC 96690 29 100.0 32 ............................. GTGATTGGGTGCTTGAGATTTGCGACGGGGCT 96629 29 100.0 32 ............................. GCTCCACGATGGCTTGGCTTCAGACCCGCAAA 96568 29 100.0 32 ............................. ATCGTGCGGGGGGTGATGACCAGGGCAGCGAA 96507 29 100.0 32 ............................. CACATACCCATGACACGGGCACCGTTGACGCC 96446 29 100.0 32 ............................. TCTCGCTCCATGAAAAACCTCAATCCCGCCGA 96385 29 100.0 32 ............................. TTCAGCACAGTGATGGCACCGGCGTGGCGCAT 96324 29 100.0 32 ............................. GGAACCAGGATGAGAGGAGCAGCCCCGTATTC 96263 29 100.0 32 ............................. CCCTCAAGAAAGCCATCAATTTGGGTGTAGGT 96202 29 100.0 32 ............................. GAGCCGGTCAGCGCCTCGCCCGCGGAGACGCT 96141 29 96.6 32 ............................T GCTGTTCGACCCGCCTCAATGGCCTCGGCGAA 96080 29 100.0 32 ............................. GACTCTCGCGCCATCTGGGCCCGCATCGTGTT 96019 29 100.0 32 ............................. TCAGCGACATCCCTCTGCTTGCTTACGCAGAA 95958 29 100.0 32 ............................. GCGTAGACAGGCCGGTGCCTGATCGATAGATG 95897 29 100.0 32 ............................. TTCGGGCGCATGATCCTGTCGAGCCTGTGGAG 95836 29 100.0 32 ............................. ATGTGTAGAGATTGCGCCCGGTGTAGGTCCAA 95775 29 100.0 32 ............................. AATGTGTCAATTATGGTTAAAGCACTCCAAAC 95714 29 100.0 32 ............................. ACTCCTTCTGAGGGCTACATGCCTGGTTTCTA 95653 29 100.0 32 ............................. AAGTAGCCGCGCTAGATAAAAGTGGAAAAAAA 95592 29 100.0 32 ............................. CCCTTCAAGAAAGAGCTGGTCGAGGTGAATCG 95531 29 100.0 32 ............................. GTGACCGAGGACGTCTTCTGGCGAGAGATGCT 95470 29 100.0 32 ............................. AGCACCGCCCGCAGCGGGCGCAATCTTGCCCA 95409 29 89.7 32 .C...........A.............T. CGGGTTACCGGCCGTTTAGCGGGCCAGCAGCA 95348 29 93.1 32 .C...........A............... TCCACCGCTACGCTGATTGAGGATCGCTTTAA 95287 29 82.8 0 .C...........AT............AA | CG,G [95261,95264] ========== ====== ====== ====== ============================= ================================= ================== 46 29 99.2 32 CTGGTCCCCGCAGGCGCGGGGATAACCCG # Left flank : GCGAGATCGACCCGCCGCCCCCAGCACCAGAGGCCATGCCTCCGGCGATCCCCGAGCCGGATTCCGTCGGCGACCAGGGGCACCGGAGTAAATGATATGGCAATGCTGGTCGTAGTCACCGAGGCGGTGCCGCCGCGCCTGCGCGGACGACTCGCCGTTTGGCTGCTGGAAATTCGCGCTGGTGTCTATGTGGGTGACGTCACCAAGCGTGTGCGCGAGATGATCTGGGAACAGATCAATGCTCTGGCCGAGGGCGGCAATGTCGCCATGGCCTGGGCCAGCAGCCATGAATCGGGGTTCGAGTTTCAAACTTATGGCAAGAACCGACGCGAGCCCGTTGATCATGACGGGTTGCGGTTGGTGCGCTTTCTACCTCAATTGGATAACTAGCTGATATTACTCGCTCTTTAAAAATTTAGATTGATCAATTAATGAGCAAAATCGCCGGTGGAATTTCCGCCGGCGATTTTGTGTATGAGAAACAATCGACTACGATTAGT # Right flank : CTGAACTCACTGGATTCTGAAGCGCCTTACTCTACCAGCTCGCTTAACCGATCCGGGAAGTTGGTGAACATGCCGTCTACGCCCCAGTCGAGCAGGCGTTGCATCTGCTCGGGGTCGTTGATGGTGTAGGGGTGCACCAGCAGCCCGTTGTCGTGGGCCTGCTCCACGAAGCCGGCGTCGATGACGTCTTCGCCGTCATAGACGACGTTGGGGCCGATGCCCACGGCGTAGTCGGCGATGGCCTGGAGGTCGGCGTCGCTGATCTCGGCGGGCGGCGGGGTCACGCCGGTCCATTCGGTCAGGCCGTTGCCGTCTTCGGTGGGGGAGTACCACACCAGCTGCACCAGCGGGATATCGGCGTTGAGGTCGTGGATCTGCCGCAGGCTGTCCTGGCTGAACGATTGGATGGCCACCGAGCCGGACTCGACCAGCCCCTCGGCCTCGAGGGTCTCGACCAGCGAGTGCTGTAACTCGGGGTAGCGCTCGGGCGACTTGGTCTC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCAGGCGCGGGGATAACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //