Array 1 1085808-1089009 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025085.1 Serratia sp. ATCC 39006 strain LacA chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1085808 29 100.0 32 ............................. TAAACAATTGCAGGACCAGCAAAATCTGTGGC 1085869 29 96.6 32 ............................A CAAAACGACTAAACGCCTGCTGACTTAACAGC 1085930 29 100.0 32 ............................. TCATCGTTAAATCCTCAGCCTGTTCGCGAGAC 1085991 29 100.0 32 ............................. ATGATTACGTGTTTAGCGTCATTGCTGCCGTT 1086052 29 100.0 32 ............................. GCGTTTGCAATTGCAAACGCGGTCATGAATAC 1086113 29 100.0 32 ............................. GAGTTATTCAGAACGTCTAGTTTAGTAGCGCC 1086174 29 100.0 32 ............................. TGCTCATGCATCGCGATACTCATAATCCCATT 1086235 29 100.0 33 ............................. GCGGGCTACCGTAACAGCAAATGGAACGGTGCA 1086297 29 100.0 32 ............................. CAGCGGCGATTATTTCTGATAAGCTCAAAAGT 1086358 29 100.0 32 ............................. GTGTGATTTGGACAATACTTTTTGAGGATGAC 1086419 29 100.0 32 ............................. ACCCATTTATCTGTGAAATAGATGGTGTCATC 1086480 29 100.0 32 ............................. AAAATCCATCTCCTAACGCTGAAATTGGAGTC 1086541 29 100.0 32 ............................. ATATTGAATATTCTCATAAGTAGAAGCCTGCA 1086602 29 100.0 32 ............................. CGGTGAGAGCGATTACAGGCGCGCTAATTATA 1086663 29 100.0 32 ............................. TAATGATCGTGTTCATATTGAAGTAAAAGATG 1086724 29 100.0 32 ............................. AAAAAGGAATCCTAAAATACATCCCAGCATGG 1086785 29 100.0 32 ............................. CGTGGTATGAGATTACCATTGGTAAATAAAAA 1086846 29 100.0 32 ............................. ATACCCGCTCTGGACTAGAGGCGACAGCAACA 1086907 29 100.0 32 ............................. AGGAAGGTGTCTTTTTATCAACTACAGACTGA 1086968 29 100.0 32 ............................. TCAATTCGCTCAATATATAAAAGGGATCTCAC 1087029 29 100.0 32 ............................. CATCGACAAAAGAGACGTCATCTGGCGCACAA 1087090 29 100.0 32 ............................. TATTGCGGCGTGAAGACCACACCGGCGCGGCT 1087151 29 100.0 32 ............................. CGCTTCAAACCGGTGGCACACGCATGTAATCT 1087212 29 100.0 32 ............................. GCAGAATATCTGCTCATGCCAAAACATATCAT 1087273 29 100.0 32 ............................. CAATGCCGATGTCCATAACAAAACAATATCAA 1087334 29 100.0 32 ............................. TAGACGCTTTTATACTTGCCAAACGGCACGTT 1087395 29 100.0 32 ............................. TATAAAGCACAAAGCACCTCGCGGGGCTTTTT 1087456 29 100.0 32 ............................. ATGTCTGGCCTACTTACACACTCAACGATGAC 1087517 29 100.0 32 ............................. TCAACATGGATTCCCTTATGCGTACTGTTGGA 1087578 29 100.0 32 ............................. AGTATTTGTAATGATATCGAACATTCAGTGCA 1087639 29 100.0 32 ............................. CATATTCATGGAGCCATCATGGTGCGGTGAAA 1087700 29 100.0 32 ............................. CCCGAGCTACCAATGCATCGGCTTGGATCTTA 1087761 29 100.0 32 ............................. TCTGCCTTTGAATCTTTTGGCGTATCAGTATT 1087822 29 100.0 32 ............................. TATGATGCCGGTGTGTGTCAGCGCGACTTAGA 1087883 29 100.0 32 ............................. CAAATGCGTCAGCAGCATCAGGGGTGGGGTTA 1087944 29 100.0 32 ............................. CTTACCGGTAACGTGCTTACTGACGTTGTTGA 1088005 29 100.0 32 ............................. GTGAATTTGTATATCGTCACGAGCCAGCCAAC 1088066 29 100.0 32 ............................. GTTCCAACTTCGCGCACCGACCCAGTGCGAGC 1088127 29 100.0 32 ............................. ATTCTGAGCCCAATTCTCAAGTTGTTAACCCC 1088188 29 100.0 32 ............................. CTGGTGAAATTCTTGATTGACCAGTTGAAACC 1088249 29 100.0 32 ............................. CACGGCATACCCAATCATCTGTGGGACAGAGG 1088310 29 100.0 32 ............................. CTTCTTTATCTAATGTGGCCTGCGCGTTAACC 1088371 29 100.0 32 ............................. GCCCGGCGTTCCTGGCGGCTCATCTGGTTGAA 1088432 29 100.0 33 ............................. TAGAACAGAACTGTATCACCGGTAGTTGCCGCA 1088494 29 100.0 32 ............................. TCGCAATGGCGTAATGATTACATGCTCTGGCG 1088555 29 100.0 32 ............................. AATCAGGACGTAGCCAGTGTCCTGAGCAACAT 1088616 29 100.0 32 ............................. GTTTGGGTATCCGCTTTGTTGAAGTCGCACTA 1088677 29 96.6 32 ..............T.............. CTTGCTGCTCGTCAGCCTGAGCGTCAGCTGGA 1088738 29 100.0 32 ............................. CCACCAACCAGGAACTTTTTCACCATTCTCCC 1088799 29 96.6 32 ............T................ AGTACGTCCAAAAAATAAAATTGGGCGCGGTT 1088860 29 100.0 32 ............................. ATGGCCGAAATTCAGGCCAAAAGCGTGGCGGC 1088921 29 100.0 32 ............................. TAACAAAGGTAAAGGAGAAAATAACACTTTTC 1088982 28 93.1 0 .......................-...T. | ========== ====== ====== ====== ============================= ================================= ================== 53 29 99.7 32 GTGTTCCCCGCACCCGCGGGGATAAACCG # Left flank : TTGATTGAAGCGGTGTTGGCGGCCGGAGAAATAGAGCCGCCGCAACCGCCTGCTGACGCACAACCTCCAGCTATTCCTGAGCCTGCGCCATTCGGTGATGTCGGTCACCGTGGGAGCGGCGGATGAGTATGTTGGTGGTCGTGACGGAAAATGTGCCGCCGCGTCTGCGTGGTCGGCTGGCGATATGGTTGTTGGAAGTTCGTGCTGGTGTCTATGTGGGTGAAACTTCGCGGCGTATACGGGAAATGATCTGGCAACAGATTGTGGAACTGGCCGAACAAGGGAATGTGGTGATGGCGTGGGCGACCAATACGGAATCTGGTTTCGAGTTCCAGACCTGGGGCGAAAACCGCCGAATGCCGGTGGATCTGGATGGACTGCGGTTAGTCTCTTTTCACCCCATTGAAAATCAATAAGTTAGTGTTCTTTAACAAGCAGGAAAAATTGGTGGATTTTTTAAGACTAGAAAATTCCTTATAAAACAGGTATATATTTTTAGA # Right flank : GGATCCTCTGTCAGTGTTATGTAGTCTCCTGTACCCCGCAGGGACAATAGCTTTATTTTTGTAATAAATAGTTACCGTATTTTCCATTCTTTATCGGTTATGGAGCACGTTAATTTGCTTTGACTGTCTTTATTTCGTTCAGAAAGTGGCATGATGTGCAGTTCCGATCGCAATACTGATTACCGTAGCACTAACAGTGGACTGATGTTGTTGAGCCGGGGAGGGACCGTGGAAGCAGACAATATTCTGGGAGTGATTTCTCGTTATCTTAAAAAACTGCATGTGTTGACGTTGTGTGTCGGCAGTGGTGATGATTTGTGGTGCGCCAACTGTTTTTATACGTTTGATGAACGTCAGGTGGCGTTTTATCTGATGACGGAAGCGAATACCAGACACGGTGAAATGATGCTGAGGCATCCTCGGGTGGCGGGTACGGTTAATGGCCAACCCAAGAGTGTACTGCTGATTAAAGGTGTGCAATTTTTAGGGGAAATAGCCTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACCAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1435404-1438854 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025085.1 Serratia sp. ATCC 39006 strain LacA chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1435404 28 100.0 33 ............................ CTGCAAAAATGCAGTAATATCAAGAAGTTTTAC 1435465 28 100.0 32 ............................ TGGAAGCCGCCAGTGTCGTCAGCATCAGATGT 1435525 28 100.0 32 ............................ ATCAGCCGAAATAGTAAAATCAGCATTGGTGA 1435585 28 100.0 32 ............................ AACAGTCATGACCGTTGATATGTTTTTATGCC 1435645 28 100.0 32 ............................ ATAAGCAGGTTTATTGATCGATTTTATAATGA 1435705 28 100.0 32 ............................ AATCCCAGGAATCACTATATCTGGCAAGTAAT 1435765 28 100.0 32 ............................ GATAGCAAATGAATATGCAAATACCACATTAA 1435825 28 100.0 32 ............................ TATACCGATTGCGTAGATGTGTACAACATCAT 1435885 28 100.0 32 ............................ GACACCATGTCAGAACTGGGTGAGCTTTATTC 1435945 28 100.0 32 ............................ TAAAGTTGTCCCCGCCGATTCAACGCCAGCTG 1436005 28 100.0 32 ............................ AGTAGTTGTGACTATTGATGGTGATGGTGGTA 1436065 28 100.0 32 ............................ GGAAGAGACGGCGCATAACAGGTAAGGGAATT 1436125 28 100.0 32 ............................ TTCAGTGCATTCAGGATAGAAGTAATAAGCTA 1436185 28 100.0 32 ............................ AACTAACCCGGCATGGTATCCGCTGCGTAACA 1436245 28 100.0 32 ............................ TTTCAGATCCTCCGATATGCGCCATGAATCCG 1436305 28 100.0 32 ............................ AAATGGCGCTACGCTGTCGTAGGCGTAATATT 1436365 28 100.0 32 ............................ ATATGGTGCTACCAACACAACCTATCTGAATC 1436425 28 100.0 32 ............................ AAATAGTCAGGGCGTTCCGGGCTCACCGTATT 1436485 28 100.0 32 ............................ ATCGGTGCCACTATCTGGTGTGGAGTACAAAT 1436545 28 100.0 32 ............................ ATCAAACTGCATACCTACAGCAACCTCCCCTA 1436605 28 100.0 32 ............................ GGTAATCGTTCATGGAAACCGGAAACGGACGA 1436665 28 100.0 32 ............................ AATGGGAAAATGGCTTTCATTGTCCCCTAGCC 1436725 28 100.0 32 ............................ ATATCGCCGTATGTACCGTCGTTAAGTAACCG 1436785 28 100.0 32 ............................ AGTGGTATCCCCGCAATGACACGAGACGCGTT 1436845 28 100.0 32 ............................ TGAGAACAATTCTCATCCCTAATTTAACACTG 1436905 28 100.0 33 ............................ GGTATCGGTGTGTCGGTTGAAAAACAGGTAGAC 1436966 28 100.0 32 ............................ AGAAGCATTGGAGCAGTTCGGCAAGTACGCCA 1437026 28 100.0 32 ............................ GTAACCACGTCGTTAGATATGCGTAGTTCGTT 1437086 28 100.0 33 ............................ GTACAAGGGGGCCAACACGGCTCATTTCTATAT 1437147 28 100.0 32 ............................ CTGCGCTCAATACGGTGAGCCCGGAACGCCCT 1437207 28 100.0 32 ............................ TAGATAAACCTCAACGGATTGAGGGCATCCCG 1437267 28 100.0 32 ............................ CGTCGATAGTCTCGCGGAACAACTATCTGAAT 1437327 28 100.0 32 ............................ GGAAAAGAGATTTTCAGCGGCACCCCTATCAG 1437387 28 100.0 32 ............................ ACGGCCCGAGGACATCATTTCTAGTCCCATTT 1437447 28 100.0 32 ............................ TGAGAAGTGCCTCACATTCGGCCTGTGAATAT 1437507 28 100.0 32 ............................ AAAAGAGTTGGCTTTAAAGTTTGCCTCGATGA 1437567 28 100.0 32 ............................ GCGTAAGATGATACATAACAACACTAAAATGA 1437627 28 100.0 32 ............................ AGAGAGCTATTGCAGCTACAGCACTGCTACAT 1437687 28 100.0 32 ............................ GACAATGCAATTAAATTCAATAATCATTTTTT 1437747 28 100.0 32 ............................ AGATGAAATAGAATATCGTGAGCGCGTTATTA 1437807 28 100.0 32 ............................ AAGGAAAGCAACTTTCTCCAGTCGAGCGCGCT 1437867 28 100.0 32 ............................ AGGAAATGCTGCGCGGAGTAGTAGCTAAACTT 1437927 28 100.0 32 ............................ GTCCGTGGCATTGGATGGTCACGCCTCGATCC 1437987 28 100.0 32 ............................ AGGGGGCAATTGGCGATATTCAAGCAGTTGAT 1438047 28 100.0 32 ............................ ATTAAATCCTCTGGCTGGCACAGGTGCGCTTC 1438107 28 100.0 32 ............................ GATGACGGATACGCGAAAAGCTGCGTTAATAT 1438167 28 100.0 32 ............................ ACCACTTTTCAAATTCCGCCCTATCGTTCATT 1438227 28 100.0 32 ............................ AATGAACCAAACCTGTGCACCCGGCCCGATGT 1438287 28 100.0 32 ............................ GTTAGAGGCGAAGATTCCTACGCCTTCATTTG 1438347 28 100.0 32 ............................ GTTAGAAGACTGAGTCTTAGCGAACATTTCAA 1438407 28 100.0 32 ............................ CATACCATGCATGAATGCAGTGCTTACCGGAA 1438467 28 100.0 32 ............................ AAGAGCCAACTAGCGATGAAATATCATCATCG 1438527 28 100.0 32 ............................ ACTAAACACAAAACTGGCGAATCCCATATCAA 1438587 28 100.0 32 ............................ AAAAACGCCAAAAAGTTTAGCTCAGGCTCCTT 1438647 28 100.0 32 ............................ ATGTATCAGCTGCGGGAGGCATCACGATGGAC 1438707 28 100.0 32 ............................ AGAAAAACATTCGTTACGACAATTTTTGAAGG 1438767 28 100.0 32 ............................ AAGAAGACGGGACATCGGGGACTGCCAGTTCT 1438827 28 78.6 0 ...........C........T.G..TCT | ========== ====== ====== ====== ============================ ================================= ================== 58 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GTTACGGAAGTACCGGTGCCGAGCATCACGACACTGGTATTGGCGATGGGAATATTCCAGTAAAGCGACTGGTTTCCTTCTTCCGTGACATATTCTACCCTGCCGCCATTAACCAGAATACGGCAGTGCTGGAGATAATAAATATTGGCGCGCTTGGAATGCAGAATCGTTTTTAAATCGGAAGGGCTAAAAGCATTATCCATAATATATTCTCTGCTATCGCGATTAGTTATAACGACATCGACGAAATAAATCGTAGACTAATTATTTAATAGCGAAACTTGTAATGTACTGGAAACTAAACGAAATCAGACTAGCATTTTTCATCAGCGAAAAGTGGCTTGTGCAAATAATATTCCTTCACCCATAACCCTTTTTTCTTTGCCTGACTTTTGTGCATGAATAATCAATAAGTTACAGAAGAGGTAGAAAAAAGGGTTTGGCACACGAAAATGATAATTGATGCTGATAAAACAAATCGTTAAAGTGGAAATGTTACT # Right flank : TGGCTAAGAAGCGCCACTGGAGTAACCAGATTCACCATCAATAATGTGGTGGTTCGGTAAACTCCGGTGGCTTGTTACTGCCCGAGACGGGCTTACTGTACAGCGGCGAAGGCTTCCGCTACTCGTTGTACGTTATCGTGGTTGAGGCCAGCCATACAAACGCGACCGCTGGCGATCAGGTATACGCCGAACTCTTCCCGCAGGCGATCAACCTGTTCCGGGCTGAAGCCGGTATAGCTGAACATGCCACGCTGGGTCAGCAGATAATCAAAGTTCCGTGTTGGTAGCGCTTTTTTCAGGGTATCGACCAGTGTCTGACGCATAGCAATAATACGGATGCGCATCGCTTCCACTTCCGCTTTCCACTCCGCATTCAACGTGGCGTCATTCAGCACACGGGAAACCACCTGCGCACCGAAGCTCGGCGGGCTGGAGTAGTTGCGACGAACTGTAGCTTTCAATTGACCCAGTACACGCACTGCGGCTTCCTGATCTTCACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 4375924-4376650 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025085.1 Serratia sp. ATCC 39006 strain LacA chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 4375924 37 100.0 34 ..................................... CCTAATTTCTTTCACACTACGTGTCGGTTTTTTT 4375995 37 100.0 34 ..................................... TTAAATGGGTTGATATTTTTAACGGAGTCTTTTA 4376066 37 100.0 33 ..................................... TTACACGGTTGCGCGTCTAAGATTTCTTTTAAG 4376136 37 100.0 33 ..................................... TAAGCGGCAGAACGGGCGGTATAGGCGGCATAA 4376206 37 100.0 34 ..................................... CATTTACAGAACCTGTTCCACTTAATGAAGTTGC 4376277 37 100.0 34 ..................................... CAATCGGCCCCATAAATCACCTCTTTATGCATGG 4376348 37 100.0 32 ..................................... ATTACAGAATCATTGTCCTGACACGGTTCTGG 4376417 37 100.0 32 ..................................... GAAGAACAAAGCTCGCCCAAAAAATAGTTTTT 4376486 37 100.0 33 ..................................... TCTAATTTCTTATTAGTAGGTACTATTTCTTTG 4376556 37 100.0 22 ..................................... ATAGGCAGCATAGACGGCATAG Deletion [4376615] 4376615 36 75.7 0 .....C..A...T.-........C........TTCT. | ========== ====== ====== ====== ===================================== ================================== ================== 11 37 97.8 32 GTCCTTACGGACGCTCCCTGACTGAAGGGATTAAGAC # Left flank : CGGCTGCGAAAAATGCAGCGACGCTGCGCGTCACAAGGCTGGGCATTGCAAAAGTCGCTGTTTTTATTTGCGCTTACCGTGCCGGAACGCCAGGCTCTATGCCGTGAATTACAGCGCCTGATTAACCCAGAGGAAGACCGTCTTCTTTGCCTGCCGTTTGACACCCCATCCGGCAGTTTTCACCTTGGCCCTCGATCGGATTACTTACTCATTCACTCCGACCCGCGCCTGAATGATTTTGTATTTTAAACACACAACCGGCACACTCTTTGCTTATTTTACCCTCTGAACCCGCCACCACCCGACGGGCCAATTTTTTGCACAAAAAACCAACAGAAATAAAATCACGTCAATAACAACACACGTGACATCAGGTCGTTAGCGCCACGACGTTTGCACTGGCACCAGTTTTGCTTAAAAACGTGCTTTTTGAGGCGAGAAAAACAGAAAAAACAGGGTTTGCTTGATCAAATAAAAACAATGGGTTATAAATTTTCATT # Right flank : CTCCACCGGACGGTTTTCCGCTCATTCTCAAATTTTCCTTATCCGTTGATAGGCATTTCGGCTGAAATTTCGTATGGTTAAACCCATTACGGGCGGGCAACGTGGCGCGCCCCTTTTGGCACAAGGAGATGTCAATGAACTGGCTTGCCGCCTCTTGCCATGTGGCTGCCTTTGCGCTGTTACATAACCTGAAACCGCTGGCGCAGCGTGCCGGCATTCAGGATTTCCCGTCACCGGCGCTGGCAAACAAACTGTTTGCGCCGCTGCCGGAAAGCCTCTCGGCCCGTGCGGATCTGCACGAAAATACATTAACCCTGCTATTGGATTTCGCCGCCAGACTGGCGCGCGGCCTGCCGGAGACGCCCGTAAGCCGTGGCGAAACCGGGCTGATACCGCTCACCCACCTGTTAGCGGACGATAACCACAGCGCCCCGGCGGAGCGCTGTTACAGCCCACTGGCCCCGCTGGGGGTCGATTCGCTGATGCCGGTGACGGCAGCG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTTACGGACGCTCCCTGACTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 4 4385116-4385713 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025085.1 Serratia sp. ATCC 39006 strain LacA chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 4385116 37 100.0 33 ..................................... TTATTATCTGGATATGTATCCCCACAATCTATA 4385186 37 100.0 33 ..................................... ATCAATGCATCGCCAGACAGTGAATTGACTACT 4385256 37 100.0 33 ..................................... TTGGTCACCCGGTTTTGTTTCTATCAAAGGTAC 4385326 37 100.0 33 ..................................... ACTAGATTTCCTTCCGTTTCATTAAGCCAATAA 4385396 37 100.0 34 ..................................... AATTCACGGGCAGCGGCCTCCTCCACAGAGTTGT 4385467 37 100.0 33 ..................................... AATGACCCGCTAGCCGCCGCGCTTACCTTTACC 4385537 37 100.0 33 ..................................... CAATTTAGCTTTAAGCTCTGCTACACAGTCTCG 4385607 37 97.3 33 ................T.................... TGAAAACTTTCACTTCTTTATGAGTAGCTCTTT 4385677 37 91.9 0 ...............................A..A.A | ========== ====== ====== ====== ===================================== ================================== ================== 9 37 98.8 33 GTCCGTAAGGACGTTCCCTGACTGAAGGGATTAAGAC # Left flank : ATAATACTCAAAAAATAACTTTCATTAACCTCCCCCATCGTTCCATCATGCGTAATCGTTCGGGATAAATTTAATTGAGAGGCCAATAGTTGTTGTTGTAAATTAAAGGACTGTTTTAAAAACTCCCTACCATTAATTCTAGATAACTTTTTTGCCTGATTAGTCATATTCCTTTCCTGATTTTAATTTTCTGAATATCCACCCGGTGGGAAAGTATATCGCTTATCCATAAATTTTCCCGCGATATCAGCCCCCATTCAGGCACAGATTTTGCTTATTTTCCCCGCCGCGCCCGTCGTTCTCCGGCAGGCCGATTTTTCGCACAAAAAACAAGCAAAAATAAAATTATGCCGATAACAACTCACATGACATCAATCTATTAGCGACACAACGTTTGCACTGGCACCACTTTTGCTTAAAAACGTATTTTTTGCGACGGGAAAGCAGAAAAAGTCAGGCTTGCTTGATCAAACAAAAACAATGGGTTATAAATTTTCATT # Right flank : ACCCCTCAATTTTGAGGGGTTTTTTTATGGTGTTTTTATACTTAGTCAATTTATGCCGCTATCTTGGGTCTCAATGGAATCGGCTGTACAGAGCATTGTCTCTTATTAGGTTAATAAAACTGGCATTGCTAAAAAGCTGAGTATGAGTAAAGAAACTTCATATCGTTATCTCAGAACAAGGATTGAAAACGGTCGCTTTTCAAGCATAATTATATTAACCTGTAAGAATAGTTACTTTTTTAAAAAGGATATTATTTTGAAAAGTAAGCAAAATTTTCTGAAAGATGAAAAATCCGACTGGGACATTGAGCTGGGTTTACTTGAGCAAAATTCTTATTCCGCTGATTTGAAAGAAGCTGTAAGCGCTACTTTCAAAGTAGCAAGTGTTGTACTTTCTTTTTTACCAGATAAGAAACGCCGCAGTTCTTCTCTCACTGACGGGTTGTATGAAAATACCTCAAACGATGGCTGGCAACACGGCTCTCAAGGGTATGGTTTTT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGTAAGGACGTTCCCTGACTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //