Array 1 430570-425792 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRLG01000016.1 Flavobacterium daejeonense strain RCH33 contig16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 430569 36 100.0 29 .................................... TATTGCCGCTTCTTACTTTCACAATCAAA 430504 36 100.0 30 .................................... TTTTTGGAGATTTAATAAATACTCCTGAGA 430438 36 100.0 30 .................................... TGTTGATAAATTTTCCCATACTCCATTAAT 430372 36 100.0 30 .................................... TTTTTAGATTGAAATAATAAAGACCGAATA 430306 36 100.0 30 .................................... AGCAAATATAGAATTAATGAAAGCAAACGC 430240 36 100.0 30 .................................... ATTATTATTGGTGATACATTATCTTCTGTA 430174 36 100.0 30 .................................... TGTTATGCTTTTTTTCCTGAACCAATGATT 430108 36 100.0 30 .................................... GAAGCAGTAGCAGCAAACACACATCTTATA 430042 36 100.0 30 .................................... GTAACACTAACATTTAATAACGAATCTATA 429976 36 100.0 30 .................................... GTGGAGGATTCGTGCTTTTGCTCCTGCTCG 429910 36 100.0 30 .................................... CTACCCCTGTTCCTGCCGAATGGATATTAG 429844 36 100.0 29 .................................... TTATCGAATTGAATGCAGATAAACCAAAA 429779 36 100.0 30 .................................... AATCCGGATACTAACGCTTATACCGATGCT 429713 36 100.0 30 .................................... AGTCCTGACTATATCTATTATTAGTAGAAA 429647 36 100.0 30 .................................... CGTGAGGATTTTGAATTGATGGTCGGTAAT 429581 36 100.0 30 .................................... AGACGTTGTAAAATTCACTATTTCCGAGTT 429515 36 100.0 30 .................................... CAATTTAAATTACACCCTGATGTTCTAATT 429449 36 100.0 30 .................................... TATCAATGGCTTGTATTGTTTTTTCCTTCG 429383 36 100.0 30 .................................... ATTAGAAAGAATCAAAAACAACAAACAGCC 429317 36 100.0 30 .................................... ATAGAAGCTTTAATGTTATTAGGAAAAATG 429251 36 100.0 29 .................................... TAAATGATAAAGGTAATAGGGAGACTATT 429186 36 100.0 29 .................................... TCTAATGATTAATTTTAAAAGTTTGTACT 429121 36 100.0 30 .................................... CAGGCGACATAATTGGAATGTTCGGACAAA 429055 36 100.0 30 .................................... GAAAACTATTTTGACATAGAAAACCCAGCC 428989 36 100.0 30 .................................... TATTAGTTTTGACGAATTAACCTACGCAGT 428923 36 100.0 30 .................................... CATAAGCAACTTACCAACAGTATAACCAGC 428857 36 100.0 30 .................................... AAGCAGCGAAAACACCAGCACACCAATGAT 428791 36 100.0 30 .................................... TTTTGAAAAAAGATTCATCACTTCGGTCAA 428725 36 100.0 30 .................................... GATTCAGGGGCACGCTTCTGTTATTGGTGT 428659 36 100.0 30 .................................... AGTGAGTTCTAATATTATGATTCTCACTAA 428593 36 100.0 30 .................................... GGAAGTAAACGAAATAAAGGATATGTAAAC 428527 36 100.0 30 .................................... AAAGTTCCAAAAATATACATGGACTGGATA 428461 36 100.0 30 .................................... CTAAAAAGAATCAAAAACAATAAACAAAAT 428395 36 100.0 30 .................................... CAATTCTCAATACATTATTTCACTATGATA 428329 36 100.0 30 .................................... GCAAATTTTATTTTCCACGATACTTCTTTA 428263 36 100.0 30 .................................... CATACTGTTTACCACTAAGATCGGGGACGG 428197 36 100.0 29 .................................... TTCTGAGAATATTTCAATAATGAATCTAT 428132 36 100.0 30 .................................... TTAACATCGTAAATATGACTAAGGAAATTA 428066 36 100.0 30 .................................... ACTTATCTAAAACAGGTAGAAGCAAAAGGA 428000 36 100.0 30 .................................... CGCCATTCGCAGCCATTAAAGCCACAACCG 427934 36 100.0 30 .................................... ACAATTATATGAATCCCGCCACCAATCAAA 427868 36 100.0 30 .................................... CAATTACAAATGAAGTAATTAATAAAGCGG 427802 36 100.0 30 .................................... GTGCGTTTTGAGCATCCACACCACCGATAT 427736 36 100.0 29 .................................... GTACTGCTCCAATGTTTGAAGATGCTAAC 427671 36 100.0 30 .................................... CCATTCGCTCTTTAAACTAACTACTGTATT 427605 36 100.0 30 .................................... AATAAAAATTAACAGAATGAAAATTTATAA 427539 36 100.0 30 .................................... AAGAAATACCAACGAAAACAAACTTTTTCA 427473 36 100.0 30 .................................... TAGTTGTTAAATTAAAAGATAAAATCTAAT 427407 36 100.0 30 .................................... GAAATTGGAGAAAAAGATTCTATTTATTCT 427341 36 100.0 30 .................................... CTATCTTCCCCATCAACTCCTGCGCCTATA 427275 36 100.0 30 .................................... CTCATCGATTATAATTAACCCAATATCTCT 427209 36 100.0 30 .................................... TCAGTTTCTTGTTTTTTATCAGGTTTGGTA 427143 36 100.0 30 .................................... ACTTTGTAAAAATAGAAATAATTATTGATA 427077 36 100.0 29 .................................... CTCCCCATATTGCTTTCCATAATCAGTGT 427012 36 100.0 30 .................................... CTATAAAATTACTTCCTGTTCTGAAATGTA 426946 36 100.0 30 .................................... AAACAAGTTTTTTAGAAGATGTTATTTATC 426880 36 100.0 30 .................................... TTATTTTTTGAATGTATTTGTACATTTTTT 426814 36 100.0 30 .................................... AAAGGGGTTTAATATGAATAGAGCATTTAC 426748 36 100.0 30 .................................... AAATTTAGAAGCTACTTGTAGAGAGAGACA 426682 36 100.0 30 .................................... TTGAAAAATATCCTGAATTAATTCGAGTAC 426616 36 100.0 29 .................................... TTTTTCCCTGGTGCGAAATCTGAACCACC 426551 36 100.0 30 .................................... TTAGATGCCGCTTCGTCACCTTCGATTAAC 426485 36 100.0 30 .................................... CATCAAGAAAATGCACTGCGTATCGAACTG 426419 36 100.0 30 .................................... CAATGGCCCTTTAGTATGCACTAGAAACAT 426353 36 100.0 30 .................................... TAGCCGTTCCGGCTATTATTGGGATGACTA 426287 36 100.0 30 .................................... AGATACTCTCAAAAGATACAGCTCGACTAC 426221 36 100.0 29 .................................... TAAGATAGATAAAATAATTGTATCGAGAT 426156 36 100.0 29 .................................... GGTTTGAATTCATTTCGCTATTGTTATTA 426091 36 100.0 30 .................................... AAGAAAGAAACCAATAAAACAAAACGTCAT 426025 36 100.0 30 .................................... TTTTAATATTTAAAATATCATGAGAACGAT 425959 36 100.0 30 .................................... ACTATTGATTTTTCTAAATTATTTCTTCCT 425893 36 100.0 30 .................................... TCCAATTTTTGACATTAAAGGCGCAGGACG 425827 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 73 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TACAAAGATGAAAAAGGAAATTTGAAAGAAGAAGTGGTGACATTTTGGACAGTTGTAGAACGAAAACGAACTGGGCAATCTGCATATCAATTACCTTTTGATGGAAAAGAAATTGTAACTACGTTACATATTAATGATATGTTTTTATTGGGTTTAAATGAAGAGGAAATTAATTGGGAAAATCCGGATTATGAGGTTTTAAAAGAGCATTTATATAGGGTGCAGAAGTTTACATCTGGAGATTATTATTTTAGAATTGCAAAAACTTCATCCATTCAAAATGCCATAGAAAAACAACAAATAAATAGTTTTGGTTTTGGTAAAAATGGGTGGTCAACTCATAATCCGATTAAAGTAAAGATTTCGGTTTCGGGGAAAATATCAAAAGTATGATTTGTTGCTATTGATAAAACTTAGTTCATTGACATAATTTTTTTCAAAATCTTAAACATCTCAAACCACAACGGAAAATCTGCTGATTTTTCACTGACGGATTTTCT # Right flank : AGTTGGCATATTACCTTCTGATAATCATAAAATTAGAAAAGAATATCGTTTGATAAAATGCTTCTTTTTTGGATTGATAACCCAGGATTGAAGCATTTTTTTGTTTGTAGGATTAAAATAATTCTAATTGTGTGGGTTGTGGCTCTTTGGGGACTTCCGCTTTACCCCAAAAGTTTGAAATATTTCCAAATTGTTTATCGGTAATTCTCAAAAGACTTACTTTTCCTAAGGGTGGTAAAAGTTGGTGAATTCTTTTTTCATGTACATCGGCGCTCTCGCTGCTGGCGCAGTGGCGTACATAAACCGAGTATTGCATCATCGAGAAACCATCTTTTAAGAGATTGTTTCTAAAACCGGAAGCATACTTTCGGTCTTTTTTGGTCTCGGTTGGTAGGTCAAAAAATACAAATAGCCACATAATTCTATAACCATTTAGTTCCATAATTTTGGGTATTTGATTTTTTTGCGTTCACCGGTATAACATTGTTGCAGGGAACTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //