Array 1 11950-8033 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJSV01000041.1 Flavobacterium psychrophilum strain NNS1-1804 contig00041, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 11949 46 71.7 29 A.AA.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG T [11945] 11873 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 11797 46 100.0 29 .............................................. AAGTACATCCCCAGTATTGAAACTATGCG 11722 46 100.0 30 .............................................. AACACCCAAACATAAGAGATGAAACATAAG 11646 46 100.0 30 .............................................. GCAGACGCCCAAGGAATACAAGCAGCTGCA 11570 46 100.0 30 .............................................. CAGTTTTTTGAAATGGGTGTAGATATTCTT 11494 46 100.0 30 .............................................. TTGTCCATTCTAGCAGGTAGTAGAGATATA 11418 46 100.0 30 .............................................. ATTTCTTCATTAAGAAGCCGCACGTTAATA 11342 46 100.0 30 .............................................. AAGTCGTGAATAAAGATATACACGACCCTC 11266 46 100.0 30 .............................................. ACTATGATTTTTAATAATCGGATTACCTGC 11190 46 100.0 30 .............................................. TTTGAAATCTTTTCTTGCTTGTTCAGTTAA 11114 46 100.0 30 .............................................. TTTGGATCATTCCGCATATTTGCATCATGC 11038 46 100.0 30 .............................................. TGAAACTATTGAGGTAACAAATGAAATGTA 10962 46 100.0 30 .............................................. ACGACCTACCTTATTAACAAATGACTTTTC 10886 46 100.0 30 .............................................. ACGAATTAATAGCTTTTAATAACGCGTTAT 10810 46 100.0 30 .............................................. CTTTTGTGTTGTTTTATGTTGTACATTCGC 10734 46 100.0 29 .............................................. TAGATAAAAGAACCTTTTGTTCGTCTTTT 10659 46 100.0 30 .............................................. CTTTCGCAAAAGGAGTTGATTCAAAAAATG 10583 46 100.0 30 .............................................. AGAATAACAAGAGATACTAATACATCATTT 10507 46 100.0 30 .............................................. CTATTCATTGAATAAGCATTGAAGGTATCA 10431 46 100.0 30 .............................................. TTGATGACTGGGAGAGCCATTATGACGTAG 10355 46 100.0 29 .............................................. ACATTACAATATAATTACGGCTTTGAATA 10280 46 100.0 30 .............................................. TTTGCCCAACAGACCCTTCTCCTAATTCCG 10204 46 100.0 30 .............................................. ATTGAGGTACTTAACATTATTATCGCCACG 10128 46 100.0 30 .............................................. TGATTATGAGGTTTCTAATATAGAAAGGTC 10052 46 100.0 30 .............................................. AATCCCCCAGAAAACAAGCTAAATGATTCC 9976 46 100.0 29 .............................................. TTGTTCAATTTAATGAATAAGGTAATTGT 9901 46 100.0 30 .............................................. GGATAAATAGTATACGGCAAATCTAACTGA 9825 46 100.0 30 .............................................. CCATTTGGGAAGCACAATTTGGCGATTTCA 9749 46 100.0 30 .............................................. TAATTTAGAATTTTTCATTTTCCCTCATGG 9673 46 100.0 30 .............................................. TTATTGATACCTTATTTGAATCTACTTTTA 9597 46 100.0 30 .............................................. GCGTACTCACAAGGGAAGATTCATCCAACA 9521 46 100.0 30 .............................................. ACGCTTGACAAAAAATTAAGCCTATTTTTG 9445 46 100.0 29 .............................................. TCTCTGCTTCTAATGAACAGACTCTTTAT 9370 46 100.0 30 .............................................. CAGGTAAAAATCTAATAAGCGTACCAGGTA 9294 46 100.0 30 .............................................. CGTAACTGATCCACCGTGATTTACGTTTCC 9218 46 100.0 29 .............................................. ATAAAAAAGAAATAGAGAGTATAGATAGT 9143 46 100.0 30 .............................................. TTTTTTTAAAAACAGATAAAGAGCAACTTC 9067 46 100.0 31 .............................................. TGATGTTGTGGTTTATGATTTTGGTGATAAT 8990 46 100.0 30 .............................................. ATAGAAGATCAGCAAGAACTAGATAGTTTA 8914 46 100.0 30 .............................................. TTTAACGTTATGGTGCATTAGCAAAAAATA 8838 46 100.0 30 .............................................. TATCTGTTTGTTTGGTATCATTGCGGGTGC 8762 46 100.0 30 .............................................. GTTTATAAATGGAATGTATTTTAAAGTTCC 8686 46 100.0 30 .............................................. TGTACAATTGTTCATTTTTTGGTCTAGCAA 8610 46 100.0 30 .............................................. AAATATGCTTTCGTTTATGCCGACTAAAGC 8534 46 100.0 30 .............................................. TTACATACATAATCAATGGATATGGTTGTT 8458 46 100.0 30 .............................................. CCTGAATAGATTCTTTTCCGTATTGTTTTT 8382 46 100.0 30 .............................................. TCAAAGAATATAAAGACGCTAAAGATGCTG 8306 46 100.0 30 .............................................. TCACGATGTATTTAGAAAATATGGTTATCC 8230 46 100.0 30 .............................................. TGCTTGTAGTAGCTGTTAGTGGCATACCAC 8154 46 100.0 30 .............................................. CGCAAAAATATTATTACTAGGAGCAATCCT 8078 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 52 46 99.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ACTTTGCGGGATAGTGTCATCA # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //