Array 1 185991-182063 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGWJ010000011.1 Klebsiella pneumoniae strain 5012STDY7312596, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 185990 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 185931 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 185870 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 185809 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 185748 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 185687 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 185626 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 185565 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 185504 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 185443 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 185382 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 185321 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 185260 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 185199 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 185138 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 185077 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 185016 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 184955 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 184894 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 184833 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 184772 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 184711 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 184650 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 184589 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 184528 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 184467 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 184406 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 184345 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 184284 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 184223 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 184162 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184101 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 184040 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 183979 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 183918 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 183857 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 183796 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 183735 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 183674 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 183613 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 183552 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 183491 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 183430 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 183369 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 183308 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 183247 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 183186 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 183125 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 183064 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 183003 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 182942 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 182881 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 182820 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 182759 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 182698 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 182637 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 182576 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 182515 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 182454 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 182393 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 182332 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 182271 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 182210 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 182149 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 182091 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //