Array 1 453-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWXD01000026.1 Peptoniphilus sp. BV3AC2 contig00003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 452 29 100.0 31 ............................. CTGAATATGGCAATAGTAGACAGTTTATGTA 392 29 100.0 32 ............................. TTTCATATTTCCTCCTCTACCATGCACTAATG 331 29 96.6 32 G............................ CTTCTCACTTCCTTTACTTAGATTTGTCTCCA 270 29 100.0 32 ............................. TACCTGGGTTAAGAGCCGCCATGTCTTCCGCC 209 29 100.0 31 ............................. GCTGTACATAGTGCCGTCTTTTCTAAGTATT 149 29 93.1 32 G.......................G.... AAGTTTTGGTTAAAAATGCAACGGAGTTAAAT 88 29 100.0 30 ............................. GCTGTACATAGTGCCGTCTTTTCTAAGTTT 29 29 93.1 0 G.......................G.... | ========== ====== ====== ====== ============================= ================================ ================== 8 29 97.9 32 AGGATCACCCCTGCGTGTGCAGGAACATT # Left flank : ACTACTAAATTCGCTCTACCCGCTAAATTTGTATTTAATTTATATAAAAAATTGCCGATAAATCCCATTTTGTCAGAAAAAATACTCACAAATGACATAAGTCCAATGAATATAAGAACTGCTCCTACAATTTCCGGTCTTATAGTTTTTGGTTTAGATTTAGTTTTTGCTCTTCTCTTTTTCAAAATTACACCTCAAGTAAATTATAACATATTTATGGCTTATTTTTCTTATAAATACCTTAGAACAAATCGTGTTTTTATTAAGATATGTATATTTAATTCATTATTATAAATAAGCAAAAAATAAAAAGAGTTTTAAATTACAACTATTTTATATAATATGAAAGTTTAAAAAAATATGAATGTTAATTTATTAAAATTAGATATTAATTTATTAATAATTAAATATTTTTTAATATATTATAGTCTAATTAAATTAAGGTTACATTGTCTATGTAGGAAACTTGTTCATAATAGAATCCGCAACAAATTATGTCT # Right flank : T # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGATCACCCCTGCGTGTGCAGGAACATT # Alternate repeat : GGGATCACCCCTGCGTGTGCAGGAGCATT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.40,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 9-1255 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWXD01000028.1 Peptoniphilus sp. BV3AC2 contig00012, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9 28 100.0 33 ............................ GCTGTACATAGTGCCGTCTTTTTCTAAGTATTG 70 28 96.4 33 .......................G.... AAGTTTTGGTTAAAAATGCAACGGAGTTAAATA 131 28 100.0 33 ............................ ATCTTTATTTATTAGCTCCAGCCGTCTTTGTAG 192 28 100.0 33 ............................ CTAGGATTAATGATTCCAATTTTGATACTCTGA 253 28 100.0 33 ............................ TCCTTTCATCTAGTGCTTTCTGTTGCACTGGTA 314 28 100.0 32 ............................ TTACTTGGTCTTTATCAGTAACCGCGATGTAG 374 28 100.0 33 ............................ TCCCTTGAGCGTACGCATATTCTTGGAGTGCTG 435 28 100.0 33 ............................ CAGTACTTGCAGGATTGCTATCAGATGCACTTG 496 28 100.0 33 ............................ TGATAATTCATTATTCCTGTAACCATTAGCTGA 557 28 100.0 33 ............................ ATGTTACAATTATAGAGAACTCTTTGAATGTTA 618 28 96.4 33 .........T.................. CAAAACTATACACATTATCGCTTGCAAAGTCGG 679 28 100.0 33 ............................ AAGAAATTTGACTTAATCGTCGCAAATTATCCA 740 28 100.0 33 ............................ TACCTGGGTTAAGAGCCGCCATGTCTTCCGCCA 801 28 100.0 33 ............................ CTAGGGTTAATGATTCCAATTTTGATACTCTGA 862 28 100.0 33 ............................ TACAACAATACCAATTACGGAAATTACGTGGAG 923 28 100.0 33 ............................ TCCTTTCATCTAGTGCTTTCTGTTGCACTGGTA 984 28 100.0 33 ............................ CAGATGACCTCAATATGAGTACTCTAGTAACTG 1045 28 100.0 33 ............................ CCTCAAGTTTACCATTTTCAAATTCTGTCTCTG 1106 28 100.0 33 ............................ CTTTCTCTTTGTCCGCCTGGTGAGTCCGGGTCA 1167 28 100.0 33 ............................ TCCAGTAGAGGAAACGATTTGGTCAGAAAATAA 1228 28 92.9 0 ..............C.....A....... | ========== ====== ====== ====== ============================ ================================= ================== 21 28 99.3 33 GGATCACCCCTGCGTGTGCAGGAACATT # Left flank : CGTAACTAG # Right flank : TAGGGTTCCCACACCCATTGTTAAGTCGTATAGTTATATCAATGCTTATAAATACTAAACAATCTTCTATTCAGGTGGACTATTAATCCTACAAACTGGGATTTCTATAATTTCTATATTATCTATTCACAAAATATGAGGCAAATAATTGGAATAATAATAAATAATTCCATCACACCAATTATATTAAGAAATGCAAATAACTAATACTTATTCTTTATCACTAAAAAAGACCCAATACTACAACCAGTACAGAAGCATATAAAGAAATTGCTGAAATATTATTAACTGCTACTGGTGATGCTAATTGTGACATTTGAAAAAGTAATAAATAAAATTGTAATGATAAATCTTAAGTTTTTTATATCTGATTCCCTTTCTGCTTATGAAATACTCTTCATATAAAGCTACCGAAGAGTTTGTTGATTATAAAAAATTCACAATACTTTTTAGTTAATTCTTATTGTTTAATACGTTATTTTTAAACATATGAACGTACA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATCACCCCTGCGTGTGCAGGAACATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.30,-8.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 6694-4466 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWXD01000028.1 Peptoniphilus sp. BV3AC2 contig00012, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 6693 28 100.0 33 ............................ CAAGCATCCTGTTTGGAGCAGCTTCAAAAGCTA 6632 28 100.0 33 ............................ TGTGGTATCTTCGACGAGAAACACTTGAAGAAA 6571 28 100.0 33 ............................ TCTTTTGACCATCATCGGTAACTGATTCAATCG 6510 28 100.0 33 ............................ CGGGTAAACCGGAATTATTACAAGTGTTCTAAG 6449 28 100.0 33 ............................ CTGTAGAGTTATCTAACTTTTCTAAGACGTCAG 6388 28 100.0 33 ............................ CCCAAAGGGGACTATTCCACCATTAAATTTGGC 6327 28 100.0 33 ............................ TACCCCCTTCTTCTTCTGTCTTCTTCTTCGTTT 6266 28 100.0 33 ............................ CCGTTGGAGAAATTGCAAAAGAAGTAATAGCGG 6205 28 100.0 33 ............................ CTCGAGATGAAAGGATCTGCAAAGGATCAACTG G [6183] 6143 28 100.0 33 ............................ CTTGTTATACTGGCTCTTTGGAACCTTTAATTC 6082 28 100.0 33 ............................ CTGGATATCACCACTAATGGGACTTTACTCGAC 6021 28 100.0 33 ............................ CAATAGCTAATATAAGAGCAGATCAACAAATGG 5960 28 100.0 33 ............................ CGGTTGGCGCCCAGTCCTCGAACTTGTAGATTA 5899 28 100.0 34 ............................ TGCAAATCAAATTAAATAAATTAAAAATAGAAAA 5837 28 100.0 33 ............................ CTTGTTATACTGGCTCTTTGGAACCTTTAATTC 5776 28 100.0 33 ............................ TGATTTCACCAATGATTTTAAATCAATCATTGA 5715 28 100.0 33 ............................ CAAGCTAATAGAGGACCACGAAAAAAACCTAGA 5654 28 100.0 33 ............................ TAAAGATATTCCCAAAAGTCACCTAGATCAGTT 5593 28 100.0 33 ............................ TCCGCTGAAAATTCTTCAAACTGAGGTTTATAT 5532 28 100.0 33 ............................ TACCTACTATACTATCAATAGTAGGTATACCTA 5471 28 100.0 33 ............................ CTTTATTTGCCATTTATTTTCTCCTTTCAAATG 5410 28 100.0 33 ............................ CGGAGAAGTCAACATCATACCTTATCTAAGTAA 5349 28 100.0 33 ............................ CTAGAAGAAGCGGCGGAGAAAGATCCAATCACG 5288 28 92.9 33 ..........................TT AAAGATTGAAATGTTAGATAATAGATATCTACG 5227 28 100.0 33 ............................ TAAGAACAGAAAATGCAATAAAGCTAAAACAGC 5166 28 100.0 33 ............................ TCTTTCTGCTTCTGAATTGACGTAACCTTGAGT 5105 28 100.0 33 ............................ TGAACGACTAGGAGAGCCAATTTGGATATACAA 5044 28 100.0 33 ............................ TAAGTCAACACTAGGTTTAGCAAGTTCATCTAG 4983 28 100.0 33 ............................ CTGGAACAAGAATTTCCAGAAGGAATTTCTGTG 4922 28 100.0 33 ............................ TGACAATGTATATCCTGGAGTGGATAACCCTCA 4861 28 100.0 33 ............................ CTCCAATGGCGAGAATTAAAGTTGGTGACTAGA 4800 28 96.4 33 ..............T............. CTGAATTTCTGGCAACAGGAGTTCTTGAAAAAG 4739 28 96.4 33 ..............T............. TTAAATTTGAAAGAAAAGATGTAAGAACGAAGT 4678 28 96.4 33 ..............T............. CGAAAATATTAATGAAGGTGACATAGTCTTTAT 4617 28 100.0 35 ............................ TAATGATAGACCCTGGTCATGGTGCAGGAAAAGCA 4554 28 100.0 33 ............................ CGAGGCTTTAAACGCCAATAGAGAAGCTTTTAC 4493 28 92.9 0 .......T................G... | ========== ====== ====== ====== ============================ =================================== ================== 37 28 99.3 33 AATGTTCCTGCACACGCAGGGGTGATCC # Left flank : GGACTCGATGAAAAAACGAATAAAATAATAGAGATAGGAGCTATCAAAAGTGATTCAAAGGAAGAATTTCACAAAATAGTTAAAATAGATACCAAACTACCTCAAAATATAATAGAATTAACAGGAATAACGGACAAAGAATTGGAATTTGGAGAAAACATAAAAGAAATCTTAAAAGAACTGAAAGAATTTATAGGATTAGAAGATTTAGTAGGTTACGGGATAAAATTTGATATAAAATTTATAAATAGAAAATTAAAGTTAAATGGGTTAGACGTACTGACAAACAAAACATGGGATCTAATGGATTTTGTAAAAAGAGAAAAAAGCTTTTTAGAAAATTATAAACTAGAAACAGTATTAAAAGAATATGGGATCGACAAAAAAGTTCCTCATCGAGCACTCGAAGATTCAAAATTAATATATGAACTTTCAGAGAAAGTGCAAAAATTTCAAGAATTTTCAAAAATAAAACCTTGAAAATTAGAGGAAATTTAAGT # Right flank : TGTGTATGACCCTACTTGTGGGTTTCGTGTCATAATAGTGATAGAGGCAAATAGTTATGTAAATATAAGGAGTTCAAGACTTCTACCAAATTTTAAAACTCGAAAAAAATAATTGGTGTGCTGCTTAGAGTAATGATTATATAATAATTATTTAAAGAGTGCACCAGTATAAGGAGGGAGTAAAATGTCAAAAATCAATAAAGAGCAAATTTCTGCTAAGGGATTTTCAATTCAGATTTATACTGAAGATTTTAAAAACGATTATATAAGCTTAACGGATATAGCAAAATATAAAAATACAGATGATCCAAGATTCGTTATTCAAAACTGGATGAGAAATAGGAACACTCTTGAATTTATAGGATTATGGGAAGCACTTAATAATCCAAATTTTAACCGTGTGCAATTCGACACGTTTAGAAGTGAAGCGGGACTAAATAGATTCACAATGACCCCAGGAAAATGGATAGAATCTACAGATGCTATAGGTATAGTTTCAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATGTTCCTGCACACGCAGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.30,-8.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //