Array 1 45-280 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTTW01000101.1 Enterococcus faecalis strain CVM N60280F N60280F_S38_L001_R1_001_contig_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 45 37 100.0 30 ..................................... TAAATAGTCCCGAAGAGCTATTAGACGAGC 112 37 100.0 29 ..................................... ATCTTTCTGAGTATCCATTAAAAAGTTTT 178 37 100.0 29 ..................................... CCGCTTGGAGATCACCACAAGTAGAAAAG 244 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================== ================== 4 37 100.0 30 TGTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Left flank : TGAGAGTACAAAAACAATGCGTTCATTAATTATCTGGTAGCTGGT # Right flank : CCTCAAATTTAAAATTTGAAATCTCATTAATAATCCTTTTGATAAAAAATATAACTTTACACGGTTAAAATTCCAGACTCACTCTTTCCGCAATAATCGTTCGCGAAAATATTGTTCTTCCAATACAGTGAGCTTTTCCATCGACGTCTCGACACACTCACTATTGTCATCTAACAATTCCTTCAACAATTTTAATAATATCATATCTTTAGGTAAAAGATAATTTTTTGTATACTGATCACCAACAAAATGACAGACTCGATAAAAAGCATCAATTAGTTGTTGATTTGTCCAAGAGAGTTGATCTGGATAATGTCGCTCGATACTTTGACGAAAAACATCAAAAACTGGCAACTGCTGATACTTATCATATAACAAAATCGTTTTCTCAACATCTTCCTCCGTATACGGTAAAGGTAAGCTTCTATTACTAAAAATAAAAAACTTCAACTGCTTTGTTTCTTGAGCCAATTTCTTTAACTGCTGAAAGAGATAATGAA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 677-48 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTTW01000065.1 Enterococcus faecalis strain CVM N60280F N60280F_S38_L001_R1_001_contig_65, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 676 36 100.0 30 .................................... CATGATGCCGATGCGCTTGCCTTCCGAATA 610 36 100.0 30 .................................... CAGCCAGTCGAAAAAACAAGGGTATATAAA 544 36 100.0 30 .................................... TTGGCGTGCAAAAAACAAAGATGGGTCCGA 478 36 100.0 30 .................................... TTTTAGATTAAATTCCAGATCAGCCATTTC 412 36 100.0 30 .................................... TTCCAAACGTCACAGTTCCCTCAGAGTTAT 346 36 100.0 30 .................................... GATACTGAAATTTGGCGGTTACCAAATATT 280 36 100.0 30 .................................... AAATCACTATCTAATACTTTTGCACCCAAA 214 36 100.0 30 .................................... ATGCAACCACGCAGAATAGCATAATAGCGT 148 36 100.0 29 .................................... AATGAAGCGGATATTTTGGCAATGACCTA 83 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 100.0 30 GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Left flank : GCGCCAGATTGGACTTGACTCAAACCTGTTCCGCTTCCGCCACCTTGGACATTAATAAATCTTCCCGGATTTTGGCTTTGATATTCCTCACTCGCTGTCTCTACTAATGGTTGTAAAGCTGATGAGCCTACCGCTGTGATGGATTCACCACGATCAATCCATTTTGCACATCCTGTTAAAGTAAGTATACTTGCCAAACCAATAAATAATAGCAATCTTTTTTTCATCGATTCATTATTCCTCCAATTAATTTCAATCTATTCTATTTTACCATTATATGTAGGACTTGAAAATTATAAGTTATCAATTTGTTGGTACAACTGAGAAAACTCTTAAATTAAATAACAAAAAGTATCTGAAAAAGCCAATTTGGCTGTTGCTTCAGATACAAATAATTATGCTAGAAAGATGACTATATTTAAACATTTAGTGGGGATGGCTTTTTTGAAAATTATTTGGGGTATAAAAGCGAGTTCGTACATCCAACCTACTTCCTTATT # Right flank : CTGCAAAAGACACTCGACGGACCAACCACTGGTTTTACTGATAAGAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //