Array 1 1715909-1713989 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP014569.1 Serpentinimonas maccroryi strain B1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1715908 29 100.0 32 ............................. TGCTGGGTGGGTGTAAGCCACAGCCAGGCTAT 1715847 29 100.0 32 ............................. CATGAAACCAGGCGTTTATGACACTCTGACGA 1715786 29 100.0 32 ............................. AGCCTGCGCACTGTCACCGAACAGGGCATGCC 1715725 29 100.0 32 ............................. CGCAGCACCATCAGAAAGCCGTCAACCTGTGG 1715664 29 100.0 32 ............................. TCAAGCTCGGCCAATCGCGCCGCCATGACCGC 1715603 29 96.6 32 ............................G TGATGCACCAGCCTGTGGTTGATGCGCCCCCG 1715542 29 100.0 32 ............................. CAATGGCGCCACGGCGACCCGTCTGGTTGCTT 1715481 29 100.0 32 ............................. TGACACAAGAGATTACGGCGCTGCGCGGTGCT 1715420 29 100.0 32 ............................. TTGCGCAGCCGCGCCGTCACCACAGCAGACGC 1715359 29 100.0 32 ............................. CTCACTTGCTGCTCGAACACCGCCTGGAAGCG 1715298 29 100.0 32 ............................. GCTCCACCCGCTGCGAAAGCGCGGACTGCTGC 1715237 29 100.0 32 ............................. CTTGGGAATGGGGCACGGCGGTGCCGGATGTG 1715176 29 100.0 32 ............................. TGGCCTTCCATCGCTTCGACCGCCGTCCCGGA 1715115 29 100.0 32 ............................. CTCACTTGGATGCGGCCACGGCCCGGCAGGCC 1715054 29 100.0 32 ............................. AAGCGACAAAGCCTAGGGGCCTCTGCAGCGCA 1714993 29 100.0 32 ............................. TGATCTGTGAGGCAAATAGAGCCTGCCAGCTC 1714932 29 100.0 32 ............................. GCGATCCGCCTACCCTGACCCAATCCGCCCCG 1714871 29 100.0 32 ............................. CGAAGTCTGGCACGCGATTTACTTCTGCTCAA 1714810 29 100.0 32 ............................. CGGGAATTGACAGCAAATTGCCGCCCACCACC 1714749 29 100.0 32 ............................. TGGAGCCTTCGGCTGCTTCCTTGGTCGGCTTG 1714688 29 100.0 32 ............................. ACTGCGCAAATCAAGCGCCGCCCGGTGGATCT 1714627 29 100.0 32 ............................. TGCACTTGCCCGATGGCCGGGTATTCGACGCT 1714566 29 100.0 32 ............................. GTGCTGCTGTCGTGGCCACAGGCACCCACTTG 1714505 29 100.0 32 ............................. CGCCGACGCATGGCGTGGGTTTCGCTGGTGGC 1714444 29 96.6 32 ............................T TCACATGAGGCAGATGTGGCGCGGGCAATGAA 1714383 29 100.0 32 ............................. CGCAGCTTGTGGCTAAGGCACAGGCCGCGTTC 1714322 29 100.0 32 ............................. TTCAGCATCTACAACGGCGACTGCGTGGAAGT 1714261 29 100.0 32 ............................. CGTTCGCTGGTGGAAGCGGGCGGCGTGTCGAT 1714200 29 100.0 32 ............................. TGCGGGCGCGTGCGCTTGAGCCGGGTGCGGGT 1714139 29 100.0 32 ............................. CGACTCGGCTCCCAAGCCAGGCGCCGCACCGT 1714078 29 100.0 32 ............................. CTGGAGGCGGGAACCGTGACCTTCAACAACGT 1714017 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 32 29 99.8 32 GGTTCCCCCGCGCAAGCGGGGATAGACCC # Left flank : TACATGCTGCACGAAGGCGCGAAATACTGGTCCGACCCCTGGCATTGGGCGCAGACCGCCATCGTCGCCGCCTGCCGCACTCATGGCATCCTGCCCGTCGATGGTCCCTTCGGCGATTTCAGCGATGATGAGGGCTTCCGCGCCCAGGCGCTGCGCTCGGCCACGCTGGGCATGGTCGGCAAATGGGCGATCCACCCCAAGCAGGTGGCCCTTGCGAACGAGGTCTTCACCCCCTCGGACGAGGCCGTGGCCGAGGCCCGCGAAATCCTCGCCGCCATGGACGCCGCCAAGGCCCGCGGCGAAGGCGCCACCGTCTACAAGGGCCGCCTTGTGGACATCGCCTCGATCAAACAGGCCGAGGTGATCGTGCGCCAGTCGGAAATGATCGCCCGCTGATCCGATCCGCGCCATCCGCCCCGCCGCGCAGGTGGGGCGGTCGCGCTTTGAGTATTTTCAGCAAGATGAAACAGCAGGCGCGGCGCGGTTCAGCCGCGCTCGTC # Right flank : TTGGTTGCCGGTGCGCCCCCGCCTGGTACGGTGGTTCCCCCGCGCAAGCCCCCCATGTCAGAATACTTGTCGCCTCGATAGAACCCGGCTGTTCCTGACTTCAAAGTCATGAACCTTGGTGGTAGGAGGCTGTGGAGCTTGTGGTCGAAGGTCGGTGCGGTGGGCAACGCGTCAGCGTTGTCCACGGCCAGCCGACCGGTGCGCGCAGCGCATCGTCCACAAATCCACAGCCTGCACTGGCGCCGGGTGGCACAGCACACACTCGGGGGCGAGTGAAGAGAGAACGAAGTGGCTCGATACGGACAAGCATTCAAAAACCGCGTGGTAGCCCGGCTGCTGCCACCAGAGAGCGCCCCACTGGCGGCGCTGGCACAAGAGTTTGGCGTGAGCGCCGACACCCTAGAGCGCTGGCGCAGCGCCGCTTTGGCCCAGCCCGCGCAGCAGCGCAGTTGGACGGCGGCGGCGCGCCTCGAAGCGGTGATCAGCACAGCGGCGCTGGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGCAAGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA // Array 2 1724302-1722015 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP014569.1 Serpentinimonas maccroryi strain B1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1724301 29 100.0 32 ............................. CGCTGGCATTGAAGCACCTCGCCGATTGGCTC 1724240 29 100.0 32 ............................. TGAAAACGACAGCACGGGATCGCCGTCTTTGA 1724179 29 100.0 32 ............................. CCATCGGCCTCGATGAGATGGTCAAAAACGGG 1724118 29 100.0 32 ............................. ATTGGCGACTATGCCTCGCATACGCGCCACCT 1724057 29 96.6 32 ............................G TTGCCGATTCTGTTTTGGAGCATTGCCCCCTG 1723996 29 100.0 32 ............................. TGAAGGCCCATGTCACGCCCCAGCCTTTTCGG 1723935 29 100.0 32 ............................. GGCATCAACGGCCTGCACAGCGGCCCGCAATG 1723874 29 100.0 32 ............................. CGTAGTGCCCGGAGCAACCAGGCCATAATGGA 1723813 29 100.0 32 ............................. TCGACCATCTGGTTGCGTGCGCCAAACAGCGC 1723752 29 100.0 32 ............................. GCCACCCGGGGTGTTGAGCAGCCAGCGATCCT 1723691 29 100.0 32 ............................. ATGTTTTCCCCAAAGTTCAGGGCGCTTCATCC 1723630 29 100.0 32 ............................. CCGAGCGCGTGACAAAAATGCACGGCGTCTAT 1723569 29 100.0 32 ............................. CGCTTCGGCTCTTGGATTCGTGACCTGCAAGG 1723508 29 100.0 32 ............................. GCTGGCCCCGTACAACAACGCGGGCACTGGCG 1723447 29 100.0 32 ............................. CTTAATCTGGTGATCAACCTGATCGGCGTGGC 1723386 29 100.0 32 ............................. GAGCGTGAGCTTGCGGAAAATCTTCTCCACCC 1723325 29 100.0 32 ............................. TGGGAGGATCGCGGCATATCCAAGCGCGGGCT 1723264 29 100.0 32 ............................. TCAAGAGCGGCTGGCGCGTGCAGATTGCACGG 1723203 29 100.0 33 ............................. TTGCAGGTGGGATAGGCGGCGCAGTACCTGGCG 1723141 29 100.0 32 ............................. CAGTCTTGCCATGTCTGTTCGTCAACATCGGC 1723080 29 100.0 32 ............................. ATGTTCGAGGCCATCGGCAGCGGGGCCAAGTC 1723019 29 100.0 32 ............................. TCGTAGGGCGGCACGGCCACGGCGGTGATGGT 1722958 29 100.0 32 ............................. TACGGCGGGTTTCCGTTCCTGCCGAACAAGAA 1722897 29 100.0 32 ............................. TGACTTTTGTCCATCAAGCCACCCAATGTTTC 1722836 29 100.0 32 ............................. TGCGCGCCAGGCAGTGGGGCCCAGCGTGTCGT 1722775 29 100.0 32 ............................. GACGACTACCCCATAATCCGCTCAGACGTCAC 1722714 29 100.0 32 ............................. CGCCGCGCTCAGGGTGACGGTGTTGAGGGCAA 1722653 29 100.0 32 ............................. TCGCGCGCGTTTGTGTCCGAGCTCTCGGGCGC 1722592 29 100.0 32 ............................. GATCCAAATGAGCCGCCCATGCTTGCGGGCCA 1722531 29 100.0 32 ............................. CATCCGGCCAAGGGTAGGCTAGCCATCATGCG 1722470 29 96.6 32 ............................G TGAGCGGTTAGGCTCGCCGCTTGCCTGATGCG 1722409 29 100.0 32 ............................. GATTCCGGGTGCGATATGGCCGGCGTCAATCA 1722348 29 100.0 32 ............................. TTCTGCCGCTGCGCCCGCCCCGGCCACCAGCA 1722287 29 100.0 32 ............................. CGAGCAGGCCCGCCAGCGGGTGTGATGGGGTT 1722226 29 100.0 32 ............................. CAGTACGGCCTGTCGCCATGGACGAAGGAAAT 1722165 29 100.0 32 ............................. CCGCAGCCCACAGCAAAACGCACGGCAACACC 1722104 29 96.6 32 ............................G TTGACGGACGAGCAGCGCCGCATCATCCTTGA 1722043 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.7 32 GGTTCCCCCGCGCAAGCGGGGATAGACCC # Left flank : CAGGTGGACAAAGGGGCTGAGGACACGGTTGACCGCCTAGTGCGTCGTCAGGCGGCTCAGGTGTTTCGAAAACAGCAAGTCATTCCATCGATGATCGACAAAATCAAGCAGGTACTGCGCATGGAGGGGGACAATGGCGCTGGTGATGATCGTGACTCGTGACGTGGCAGACCGATTCCACGGGTTCCTTGCTTCCGTCATGCTGGAAGTTGCCCCAAACGTATTTGTCGCACCCCGGATGAACAAGGGCGTTCGGGAGCGCACATGGAGCGTTGTCTCTGACTGGCATGGGCAGGAACCGAGAGGCAGTTTGGTGATGGTCTGGCGTGATTTGAACGAGGTGGGTGGGGTTGGTTTGGCCCATCTTGGAACGCCACCCCGGGAGCTGGTCGAGATGGATGGCATGTGGTTGACCCGTCGCAGCAAGCCTGCAAGCGCTCTTTAAAAAATTAGATGTATTTTCTTGTTTTCTCTGGCAACTCAAGAAGTTGGGTGCTAGA # Right flank : TGATGGGCCGCCCGCCGCGCCCCTGGCATGTCGGTGTGCTCTACGCCGCCGACACCCGCTTTGCGAAACCCTTGCTCGCCCGCCTGCGCGCCGAACCTGATCTTTGCATCGGCGAGAATGAACCCTATGGTGGCCACCTGCCCGGCGACGCCATCGCCCGCCACGCGATTGCATGGCAACGCCTCAACGCGCTGATCGAGGTCCGCAACGACCTCATCGCAACCCCCGACCAACAGGTGCACTGGGCCGCGCGCCTCGCCCCGATCCTGCAACAGGCACTCGCCGACACCGGCCAGTAGAAGGAGACCGACGATGGACGACCAGACCCGCCTCGAACTCGAGGCCGCCGCCTTCCGCGCCCTGCGCGATCACCTGATGGTGCAGCGCCCCGATGTGCAGAACATCGACCTCATGAACCTCGCCGGCTTCTGCCGCAACTGCCTCAGCCGCTGGTATCAGGAGGCCGCGAACGCCCGCGACATCCCCATGACCAAGGACGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGCAAGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //