Array 1 179033-181560 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHQF010000003.1 Klebsiella pneumoniae isolate Kp5148, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 179033 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 179094 29 100.0 32 ............................. TTCGGAAAGTTCTTTTTCAGCTGATCCGTAAC 179155 29 100.0 31 ............................. GAAAGACGTTTTAAGTTATTGAAAAAAACCC 179215 29 100.0 32 ............................. AAGAACCTTTCGATCGCTGCAATTATCTACGC 179276 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 179337 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 179398 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGAAACCCCATAGC 179459 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 179520 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 179581 29 100.0 32 ............................. TAACCTCGTTTATGTGCGCGTTTTATAGTTGC 179642 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 179703 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 179764 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 179825 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 179886 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 179947 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 180008 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 180069 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 180130 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 180192 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 180253 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 180314 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 180375 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 180436 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 180498 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 180559 29 100.0 32 ............................. TTCATCTGGTAGCAAACCGCCATCGGGAAGAA 180620 29 100.0 32 ............................. ATTTTTTGGGGCACAATTTGGGGCATTTTTTT 180681 29 96.6 32 A............................ AGGGTTTCGATTTTATCGGGATAGAAATGAAT 180742 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 180803 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 180864 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 180925 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 180986 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 181047 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 181108 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 181169 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 181230 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 181291 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 181352 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 181413 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 181474 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 181532 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCGGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //