Array 1 3950-1479 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVES01000008.1 Fusobacterium necrophorum subsp. funduliforme strain LS_1272 331, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3949 30 100.0 35 .............................. GAGTTATATCGAGTTGCTTATTTGGGAAGATTTGG 3884 30 100.0 35 .............................. CATTTAGGGCAAGTCATTAAAATCACTTCTTTCCC 3819 30 100.0 35 .............................. GTTTCTAATGTTAAACCATTAAACGTTCCATGCGG 3754 30 100.0 35 .............................. TCTTTAACGAGTCAAGCGTGGCTAAAAGCTACTAA 3689 30 100.0 37 .............................. TATTATATTTATACACCTGAGCGGAAATAGCACTATT 3622 30 100.0 33 .............................. CCGGAAGGGTATTTGTGATACTAGTAATTCCTG 3559 30 100.0 36 .............................. CAAGGAAGTCTATCGGGAATTAGTTCCGCCGGTGGT 3493 30 100.0 36 .............................. TTATAATATCCTCCAAAGTATTTTTGTATAAAAGGA 3427 30 100.0 37 .............................. TAGTTCCTTTTCGGAACATGGAATATTTATGGTGCTT 3360 30 100.0 36 .............................. ACTGACACCGTTAAGGTGTCGGAGATAAAAAAATAA 3294 30 100.0 36 .............................. CTTCTTGCGACATCTAGCGCACAAGCAGGAGCTTCA 3228 30 100.0 36 .............................. AGCTCGAACATCTCTTTTTTGTGTTCCAAAAAATAA 3162 30 100.0 37 .............................. TTATGACGGGTAAAAGTGCACATATTTTGAATGCCGC 3095 30 100.0 36 .............................. GTTCTTTTTGCTTGTAAAAGTTGAATAAAGATAAAG 3029 30 100.0 36 .............................. TTTAAGGCTCTTTTTTTTCATCTTTGGTATTCTGAC 2963 30 100.0 38 .............................. AACTGTTTGCATACACAGAATAGACTTTTTCTGTGTTG 2895 30 100.0 37 .............................. TGTATCAGTCCGGTTGTGACTTCCTGCTTCAATACTC 2828 30 100.0 36 .............................. TATAAGTGCTTGGTATTATTAGAGAAGCCACATTTG 2762 30 100.0 35 .............................. TCAAATCTTCTTGCTTTTCGTCAAATGCCAACTCT 2697 30 100.0 35 .............................. ACCAATGATATTATACCACAAATCTTTCAAAAAAG 2632 30 100.0 37 .............................. TAAATACACACTCCTTTTAAATAGAAAAGCCACGATT 2565 30 100.0 36 .............................. AATCAAAGACGGAGATATGTTCCCATGCGAGGATTT 2499 30 100.0 37 .............................. TTTTTACAATGTCATCTTCTTTATATAAATCAATATG 2432 30 100.0 35 .............................. TTCCCAATAAATTTTCTAAAATTCTTGCACTTCCT 2367 30 100.0 37 .............................. CGATCTAAAAAGGCTATTAGGTTGCACTTCTTCAGCT 2300 30 100.0 36 .............................. TATATTCAGTATCCTCGTTCGAGAGAATGCGGTGGC 2234 30 100.0 36 .............................. TCTGATGTAGTGAATTTAGGACAAGGTTATCAGGAC 2168 30 100.0 36 .............................. GACGGAGAAAGTGTTGGATACAATCATCATGATTGG 2102 30 96.7 36 ...............G.............. GGACAAAACGTAGGAAGGTTGTGATTTTTATGTTAA 2036 30 96.7 36 ...............G.............. TTTACGAATACAGCTGAACTTAATTCGTCTTTATAA 1970 30 90.0 36 ...........G...G....A......... AAAAAAGAAATCGGTATTTGTATGTTATTTTCTTCA 1904 30 100.0 36 .............................. TGGTAAAAAATCAAGGAGGTAAAAATATGAAAAAAT 1838 30 100.0 35 .............................. CCTGATATTGTAAATATCAAAGCAATTTCTTATGA 1773 30 100.0 37 .............................. TGGAATTTTTCCTTCTTCTAATGACTTAATGACACTA 1706 30 100.0 35 .............................. TGAGGTGATTGATGAAAGCAATCTAGTCAATGCAA 1641 30 100.0 35 .............................. ATGGGCAAGGAGGAATCTTATTTCGAAAAAACTTG 1576 30 93.3 37 ...............G........A..... TTTCTTACTATCTGGAAACATGCTATTTTTTCAACAA 1509 30 70.0 0 ..C........TT..G.A.TT...TA.... | T [1487] ========== ====== ====== ====== ============================== ====================================== ================== 38 30 98.6 36 ATTAGAGTATTACTAAAGTAGAATGTAAAT # Left flank : TATTACTAAAGTAGAATGTAAATGAGCTGCATTTAGGTGTTACGGAAGCAGGAACGGCTTT # Right flank : TTGAACTATAACTAAAAAAGAGGTAAAAATGTTATGTTGGATTAAAAATCTGCAATATATGGGTTCATTATTGAAGATTGTTTGAGAGTTTCTTTTGAATTAAAAAAAGGGAGCTTTCATTGTAAGAGAATACGTAAGGATATGGTACACATAATCAGGTTACTGGAACTTCGTCCGACGACATCACCGTGATGTTGACAACTTTAGATTCCTTAAAACAAAGTGAAAGACAAATTAATATGGAAGATATGAAAAAAAGATTTAGTAATTGTACAAATGACGAGATTGACAAGAGTTCAGAAATTACACATGTTCACTCTATTTCAAAAGAAGCTTGCAGAATTTATGTGGAAATAGTGAAAAGTCTGATTATAAATAAAAATTTAAAAGACATCTTAGAGAATTTGGAATGTACAAAAAATTTTCAAGATTAAAACATCTCGATACTTTGTAGGAAGAGCAATATATTATGAATGCTTTAGGAGGTAGTTTGTGATGTG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAGTATTACTAAAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //