Array 1 44-2533 **** Predicted by CRISPRDetect 2.4 *** >NZ_BASG01000088.1 Geobacillus kaustophilus GBlys, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 44 30 100.0 38 .............................. CACTTGTAGAGCTAGAAGGTTCCCTTCGGAATACGATG 112 30 100.0 36 .............................. GATTGGTGAACTCCGGTCTTACCGCGGTGATGCTCC 178 30 100.0 35 .............................. TCCGGAAGGGATTGAAAATATTCGCGCCAAGCTCA 243 30 100.0 36 .............................. ATGCGCGTCTGAATGTCTTTTGGAACGATCAAGGAC 309 30 100.0 35 .............................. AGTGCTTCGCGTCCTTTAAATGCGGGTGATATTTA 374 30 100.0 36 .............................. GCATGTTGTTGGAGAACGCCGCCAGCGTCGCGTTCA 440 30 100.0 36 .............................. CTAGTGGCGATATTAGCAATTGTACTACGTTTGGAG 506 30 100.0 36 .............................. CTCGTCGCGAAGAGTGGATGTGCGCCCAAGCATTGT 572 30 100.0 36 .............................. AAAATTGAAGTGTACCGTGAGGAGGTGGCTTCATCA 638 30 100.0 38 .............................. CATCGAAGGAAACTCTTCGCAATCATTCGAAACAGTAC 706 30 100.0 38 .............................. AAACGCAGATGGAGGCCCTATCGAAAGGAGTCAACAAC 774 30 100.0 40 .............................. TCACGAACTAATTAAGCAAGTAAAATCAGAGCGTAGAGAG 844 30 100.0 36 .............................. TGAAGGGGACGATGTTTTTGAGTTTACAGACGGTTT 910 30 100.0 38 .............................. TTCATGAGCGGTGAGGATACATCCATACTCATTCCAGG 978 30 100.0 36 .............................. AATCGGTCGGGAGCTGATCCCACGAATGAAAAACCA 1044 30 100.0 37 .............................. CCGTTCGGCTTCACGATGATTTGCGCAGGCTTCCTGG 1111 30 100.0 36 .............................. TCAAGGAGCAGGCCGAAAAAACCGAGGAAGAGCTCG 1177 30 100.0 36 .............................. GCGATCGATACGGATGAAACGGAGGAGGAAAGCAGC 1243 30 100.0 37 .............................. AGCTTTCTTTCTGTCTCCACCATCTGTTGAGCGTACA 1310 30 100.0 37 .............................. GGCGATTCACTGCACGCACAATTCGGTTCATGTATTC 1377 30 100.0 39 .............................. GAGATGCGGTGATCAGCAAACTCAAAACAGCCTTCCCAG 1446 30 100.0 35 .............................. TCAAAAACTCATATGTCTCTTTGAGTTCTTCACGC 1511 30 100.0 34 .............................. CTACATACGCCGCTTTCCACCGCAACGCTTCCGC 1575 30 100.0 36 .............................. GTTGACTCCTCCTTTTAGTTTTGCGATTTCAATGTT 1641 30 100.0 35 .............................. AACTGACGGATAGCCAATTTTTCGAACTGAAAAAG 1706 30 100.0 35 .............................. ACACGTAACCAACAATGTTAAGTTTTCGTCAAATC 1771 30 100.0 36 .............................. ACACTCGACGACTATGACCGTCCAGCGCGAAGAGAG 1837 30 100.0 37 .............................. CATCTTTTACTTTCTCTTGGTCGGCTGGACTCATAGC 1904 30 100.0 36 .............................. AACAATTTATTGCCAGCAATCATCAAATTGCCGTTA 1970 30 100.0 36 .............................. CAGCTAGGTCCATTTGCCCAGCCATCATTTGTTGAG 2036 30 100.0 37 .............................. TAAATGTTCCCAGTAGCGCTTTTTCCGCGATCATACC 2103 30 100.0 37 .............................. AACATTCGAGGAAATGTGCAGGAAGTGGTGGCTCGTT 2170 30 100.0 39 .............................. CTCGTTGGGAGTAGGCTCTAATCCTCAAACACCTCATTC 2239 30 100.0 37 .............................. TCCGAACGTGCAGCGATCGCAAACAAACTGAATGCCG 2306 30 100.0 37 .............................. AACAATAAGGAGCGATGACTATGCCGTTGCCGAAACA 2373 30 100.0 35 .............................. CACTCCAGCGCTCCTACGGGCTTTTCCCCGCTCCC 2438 30 100.0 36 .............................. AGAAATAGAATGGGTGATTCCATGCCGCCCATAAAA 2504 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 38 30 100.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GAAACCGGCGACAACGGGAAACGAATCATTACGGACATAATCCG # Right flank : CAATTAGTTTCAGAATACACTACTCTAAAACCGGTACTCATATTGTTCCAAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 9061-10211 **** Predicted by CRISPRDetect 2.4 *** >NZ_BASG01000069.1 Geobacillus kaustophilus GBlys, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 9061 30 100.0 35 .............................. AATGAGTTCGATGAGTGGATCGAACGCGTGAATGA 9126 30 100.0 37 .............................. GCACCGCATCGTCGTCGATCAATACGGCGGCGATGTC 9193 30 100.0 37 .............................. CCATTTCATCCAGAACAGCAACCGCCTTTTCGCGAAT 9260 30 100.0 36 .............................. GGTGCTTCTACTTCGAAATCCGCAACCGAAGTCGCA 9326 30 100.0 36 .............................. CAGAAGGTGAAGCGTCCAACGATCACCGTTTCAATC 9392 30 100.0 35 .............................. CTCCTCGACGAGTGGCAGAAGCGCACCCTTTTGTA 9457 30 100.0 35 .............................. CTCCTCGACGAGTGGCAGAAGCGCACCCTTTTGTA 9522 30 100.0 35 .............................. TCAACAAACCAAAGACGTGGCTATGCTCCAAGAGC 9587 30 100.0 38 .............................. CCGGAAGAGATCAAGGAGTTGGCGGATGACATCCTAGA 9655 30 100.0 38 .............................. TAAAGCGTCTGGAAACCGTTTTTTCGGGCTTTTACCGG 9723 30 96.7 36 T............................. ACAAGAATTTCCGATGGTTTGTTATGACTGTAACAC 9789 30 100.0 35 .............................. CATGATGCTATGATGCATGACATCGAAGCGAAAGT 9854 30 100.0 34 .............................. AATGCGTTTGGTGATGTTGACGGCATCCCAAACC 9918 30 100.0 36 .............................. GTACATCTTCAACGGTAGTTTCCCTAAACTCTCGGA 9984 30 100.0 36 .............................. AGACGGGGTGGCGTTTTATTATGCTCAAAATCGAGG 10050 30 100.0 37 .............................. GGTCTCAATTTCAATAGGTTGTATAGCTCTTCTCGAG 10117 30 100.0 35 .............................. TCAGTTCATCCAGGCTTACATTAAACGCCTGGCTG 10182 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 18 30 99.8 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AACGTTCGACGGAAGAAAGAAAACGCAATTTTTTGACCCCGATGATGAGGTGTTCCCCCACCTGATTGAATTGAATTTCCGTCATAAATATGAAGCGTACTACGGCGTTCCGCCGACGGAAAGACTGTTGATCGAGCCGGTTCACGTTCATCATCGTCATCGTGTGGTGACAATGTTCAAGAATATGTATATTACAGGGTGGCTTGGCTATTACCGCCTCTGTTCTTCACCAGAACAGCTGACATTTTTATATCATGTCGGCCTAGGCAGCCGAAATTCACAAGGATTCGGCATGTTTCGCCTTAAAAGCGAATAAACGGGTCAAGAGATTGTCGTCGACCTCCAATCGTGCTAAAACCCCGGGGGATCGACGACAATGGTTTTTAGCGCCTCAAGCCTACAGCCATCAAGGTTGAAAGCCGTTGACAGAATTTTTGAAACGTGGTATGCTGAAAACAGCTCCAAACCGAAAAGCTTGATGGAACAAGCATTTTTGGGGG # Right flank : TCGCCGGGTGT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 4326-6557 **** Predicted by CRISPRDetect 2.4 *** >NZ_BASG01000065.1 Geobacillus kaustophilus GBlys, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 4326 30 100.0 36 .............................. TCGCGAAGATGTTGAGAAGTATAAACAGCAAGTCGA 4392 30 100.0 37 .............................. GACGGGGGAAGTTTCGCCCACACGAAGCACGAAAAAG 4459 30 100.0 37 .............................. CAAGAAGCGATCGAGGACAAAGCAGAAAACATCGCCA 4526 30 100.0 35 .............................. TCGCTGAAACAGCTGACTCGGTACAGTGAAGCCGA 4591 30 100.0 36 .............................. ACACAACGGTACGGACATATCAGCTGACGCCGGAGC 4657 30 100.0 35 .............................. TCCACGCTTGTAGTGAAAACAACAGCCGGAACTAC 4722 30 100.0 40 .............................. GCCGAGGCCGAGGCGAAAGCGTTGGTGAAACTATTGCCCA 4792 30 100.0 39 .............................. GCATCTCGTTCCGGATGCGTGTCAGCACATTCAGCACAT 4861 30 100.0 36 .............................. AGGCTCGCTATGGCTACGACAACATCAGTGGAATAC 4927 30 100.0 36 .............................. TTATATCATCATTTGGTGATTTGTAAACATCTTTTC 4993 30 100.0 35 .............................. CAATCTCAAAAACTCGGTTGCGATCATCGAGCGAT 5058 30 100.0 38 .............................. CGTTTCCCAGCTCGAAAAAGTGGCGCAGAAGCAACAAA 5126 30 100.0 38 .............................. CTATTTCCCCAAGCGTGTGCTGGCACGCTGCAAGCATA 5194 30 100.0 38 .............................. CATTCGATATATGGACGACGTCATTGTACTGCACGAAA 5262 30 100.0 37 .............................. ACCAAACAACTCAACCAATTTTTTAAAACTAATTCCC 5329 30 100.0 36 .............................. ACCGTCTACCCATTCAACAAGAAAGGCTGTTTTTCT 5395 30 100.0 35 .............................. TAAGCGTCTGTCAATGTTTCTTGACGTTCGCTTTC 5460 30 100.0 40 .............................. TCTATGAAACCCTTCGTACCGAAGAGAAACAGCGGTACTA 5530 30 100.0 39 .............................. TGATCGCTCTGGCCGCAGTTAACTTATTAAATTTATCGA 5599 30 100.0 34 .............................. TGAAAATCAGCAGATATTGCAAAAGCTCGAGGAA 5663 30 100.0 35 .............................. TCAAAGGTTGGCGTGATTACTAACGCTGTGAGAAA 5728 30 100.0 35 .............................. TTCAGTCACTCCTTGTTCTGTAGATTCGTTTTGGC 5793 30 100.0 35 .............................. CCTCAACCACTTTAAGTGTCTTTTGAGGTCGCCCC 5858 30 100.0 39 .............................. CGGGTTTTGTTGGTTCCGGAAAGTCGTACAATGCTACAC 5927 30 100.0 38 .............................. AAATTTTTCAATATCCCCCTAATATAGCTCCATCTCCG 5995 30 100.0 38 .............................. AAGATATTGCGATCAACGAGGCGGTCGAACTGGATAAG 6063 30 100.0 40 .............................. ACGGACGAGATGCCCGTAAACAAACCTGTTTTGGCTTTCA 6133 30 100.0 38 .............................. TCTTGTCCGGCTTCGAAGCCGAAAACCAGCCAAGATTC 6201 30 100.0 36 .............................. TCTCTAGAAATAGAGGTGAAGGAAATTGCAAAACGT 6267 30 100.0 34 .............................. GCTCGAGATTTTCGATATGGTCAATCAAGTTCAT 6331 30 100.0 36 .............................. ACCTTTAGCTCCTTCGCTGTGTCTCGGAAATTTGTC 6397 30 100.0 37 .............................. CCGTTTGACCTTTATAATATTTTGGCTGTTATCAATG 6464 30 96.7 35 ................C............. CGGAGTCGGCCGCTTTCTCCACGCGTTTCCGCCCA 6529 29 73.3 0 ......G...CG.....A..A.-GC..... | ========== ====== ====== ====== ============================== ======================================== ================== 34 30 99.1 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTGATGATTGTGGAATTGAACTTGACAGAGATCGAAACGACAGTATCAATCTTTCGAGATATCCTGCATAGCGACTGGTACCGTGAGTTGCACGGGAAGTGAAGCCTTCGGAGCGTCAATCAAACGAGAGCAGTTTCGGCGAAATCGGACAAGGATCAAGCAGGGAATGAAGCATGGGATTGAACAAGGACGCCAAAAAGGATCGAGGAAGGGAAACCCGACATCGCGAAGGAAATGTTGATGAAAGGGTAGGATATCGACACGATCCACGAACTGACCGGGCTGCCGGCGGAAAAGATCGAACAGCCGAAGAAGTCAACCCGCCTTTGCATTGTCGTCGACCTCCAATCATGCAAAAAACCCGGGGGATCGACGACAATGGTTTTTGACGCTCCAAGCCTACAGCCATCACGATTGAAAGTCATTGACAGAATTTTTGAAACGTGCTATGCTGAAAATAGCTCCAAACCGAAAAGCTTGATGGAACAAGCCTTTTTGGG # Right flank : CCCTCTTCAATGTCACGCCATCGTATGAACGTCTTCCGTTTGAAGAAACCGGATGGCTGCACTTCCCCGATCGACCGCTTCGTTTTGCTTCGGCTGCTCATTCTTGCGCCGCTTGCTTTGCAGGAAGCCGCTTTTTTGTTTCGCACATGGAGAACGTTTTGGCATCTGCTTTTTTTGTATGGCCCCATTGATCCACCAGGCATGGTTGTTCACCGCCTTTCTTTGCCGCTGCTGCATTTCCTCAGTCCGATGCGATATACTTGACATGGGAACAATCACGCTTCTTTCTCGTTCACCGTCGTGTCGGCGGACATGCTGCGTTGGCGTTGGACGGTTTGAAAGAAGGCGGAGAAAAGCGACAGGGGTGGGATGGATGCGCCGCAAACTTCGCGATCTTGGTTTTTCCATCGGCACGCTTCCGACAGGGGAGCGCAATCAAGTCACCGATGTGCCTGGGGTGCGGGTCGGTCATGTGACGATTCGGGAAGATATGAATGAGC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 21613-22375 **** Predicted by CRISPRDetect 2.4 *** >NZ_BASG01000050.1 Geobacillus kaustophilus GBlys, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 21613 30 100.0 35 .............................. TCCTTTCTTGCTGAAGCTACTGGCGTGCATAAACA 21678 30 100.0 37 .............................. TTTCATTCATCATTCTACGTACTTAGACGACGAAAAG 21745 30 100.0 36 .............................. ACATGGGCAGTCGGCAACGCGGTGACACGAAAAGAC 21811 30 100.0 39 .............................. CAACAAAGAGTCCGACGACGATACGCTTGAGATCATCGT 21880 30 100.0 36 .............................. CTTTTTGCAACGTCCGGGACCGCAAAAACGATAGGT 21946 30 100.0 34 .............................. GCAATACCTTTGAATCCAACCTTGCTGGATAAAG 22010 30 100.0 39 .............................. TTTGGTCCATGATCGAAAAGATAATAAACGGCGCCGACT 22079 30 100.0 36 .............................. TTCGTTGGATGACGTCGAGATTGTCACGGTTCCGTC 22145 30 100.0 38 .............................. GGTTCTTGTGACAGAATGCCAACTTGTACAGCGGCATT 22213 30 100.0 35 .............................. GCAGCGCCGGTTGTCGAGGTGTACCTTGCGATTGA 22278 30 100.0 38 .............................. CGGCGACAACGGGAAACGAATCATTACGGACATAATCC 22346 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 12 30 100.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AAGAGGAGGAAGCAAAACGGCGAAACGAGGTGAGCCAAATGGAAACGAAGGAAGCAAAGCGTGTGATGGAGCTCATCGTCTCATACGAACAGCGGGGGCTGGAAAAGGGAATCCAACAAGGAATCGAACAGGGGATAAAGCAAGGGATGAAGCAAGGGATGAAGCAAGGACGCCAAGAAGGGATCGAGGAAGGGAAGCTCGACGTGGTGAAGAGAATGCTGGCGAAAGGATACGATGTCGACACGATCCACGAACTGACCGGACTGCCGGTTGAGAAGATCGAACGGGTGAAGGGGTAAGCAGAGCAGACTCTTCGCCGTCGAGCCTCACATTGTCGTCGACCCCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTTTTTTGCGCAAAAATCCTACAGCCATCACGGCTGAACCATATTGACAGAATTTTTGGAATGTGGTATTCTGGAAACAACCCAAAGGGAAAAAGCTTGATTTGATGCGCATGGTTTGGG # Right flank : CACTTGTAGAGCTAGAAGGTTCCCTTCGGAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 35401-36368 **** Predicted by CRISPRDetect 2.4 *** >NZ_BASG01000021.1 Geobacillus kaustophilus GBlys, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 35401 30 100.0 40 .............................. AAGCGTGGCGCGCCGGCACGTTGGCTCAGACGGCGGCACA 35471 30 100.0 35 .............................. ACGTCAAATCCAGCTAAACGTTGTAAGTCGTATAA 35536 30 100.0 39 .............................. TACGAAGTTTCTTTTGAATTTCGATGCTTTCATGCTTGT 35605 30 100.0 39 .............................. AAATTACATTTTCATCGGGATTCATTCCCTTTTTACACC 35674 30 100.0 39 .............................. AAATTACATTTTCATCGGGATTCATTCCCTTTTTACACC 35743 30 100.0 36 .............................. CGTAAATGAAAAATAACGTTCCCATTCTTTTAGTTG 35809 30 100.0 35 .............................. AGAAGATGCGTTCCATTGAGTCGACTTCGATGTAC 35874 30 100.0 36 .............................. TCTAGGGCGAAAACCCTTTCCACTTGGCCGCTTACT 35940 30 100.0 37 .............................. CAAGGCCAATTGCCTGAAAATGCCGAGCCTATTAATC 36007 30 100.0 35 .............................. TTGAGTGTGACGGTTTGGGACTGAAATATATTTTC 36072 30 100.0 35 .............................. CCAACTCCATACTTTCATCGGCTCGGTATATTGCA 36137 30 100.0 39 .............................. TCCAAGTCACCGACAGACCGTACAAGCCGATCCAATTTG 36206 30 100.0 36 .............................. TATAGCGATCAATGGCCAAAAATACGCGCCGACGCC 36272 30 100.0 37 .............................. ATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 36339 30 86.7 0 ...............G..G....C....G. | ========== ====== ====== ====== ============================== ======================================== ================== 15 30 99.1 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CCAACCCGTCCCTTTCCGACGATATCGTCCGTGTCGCCCGTTCGCCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCTCCGGCGACGCAATACTGCACACTATTTGGCAGCGTTCCTGCTGGTCTCGCCAAAGGAATTGCCGCGCTGTTGCGCTTTGATGATGCGAGCGATGCAGAAGCCGCCGCTCTGCAACAAACGATCGCACACCACGGAATCGAAGGAGCGCTTCGGCAATACGCGGGGCTTGAGAGTGCGCACCCGCTTGTGGCCGCGGTGAGGGAAGAGTACGGGAGAATGGAGAAAAACAAAAGCTGACCGCCTTTCAAATGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATATTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCAACAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGAATGGTTTGG # Right flank : CGCTATACAGTACGGTACAACTTTTTCTGTCCCCGATGCAGGATTTTCACCCCCTGCTTGCGAATGGATAGAATTGAACACGTTCAAAGAGGGGTGATGGAATGGCTATTGACCACGACCGGTTGTTTAAAGAACTGATCCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTTCCCGACATGCATGAACACATTGATTTCAGCCATTTGTCCTTTCTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGTGAAAAATACCGCGTCGATCTATTAGTCGAGACGAAGCTGAAAGGGGAGGATGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCCATGACACCCTCCGCGAAGAACCGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 1126-433 **** Predicted by CRISPRDetect 2.4 *** >NZ_BASG01000117.1 Geobacillus kaustophilus GBlys, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1125 30 100.0 39 .............................. TCGCCGGGGTGTTCACCGGCGACTGGAAAACGGCTTTTG 1056 30 100.0 34 .............................. TCAAGAGGAATTGCCTAGACTGTTGGAACGACTG 992 30 100.0 36 .............................. CTCGGAATGGAAGGTATATTCCCGGTTATCACTTTT 926 30 100.0 38 .............................. ATCTGGAAAAAATAAAACAGTTACAAAATGAAATCATC 858 30 100.0 37 .............................. CGGAAACAAGCGGAGGGACAGATTGGGAAGATAATGA 791 30 100.0 36 .............................. AGCCGCTCATAAAGAGTTTGCTTCGGATACTTGTCC 725 30 100.0 38 .............................. TTGCCGTCTTTACCCATGGATTTCGGGATACGGACGAA 657 30 100.0 36 .............................. AATAACGGAATCGGGCGGTGCGAATTGCCTTGACGA 591 30 100.0 36 .............................. GAAACAGATCCCGATGTGTCGACGAACACGCATACG 525 30 96.7 33 .............T................ TTTTCGCTTGCGGCGGTCAAGCCAATCTATGAT 462 30 76.7 0 ............T.C.CA...A.C....C. | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 97.6 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TCAGGCTTCATCATTTAAACGCCTGGCT # Right flank : CCTCTCCATCTTCGCGCGCAGGTGTGATGGGGGGCTCGTTGTTATCGCAGAGTTAGTTTAGACCACATCTCTCATGTGCTTCGTTTGCGGAGATGAAGCGTTGTGCGCAACGGATGGGCGCCTGCGGAACAGGCAGCACAGCATTCTAAGTTGGGCAAAGGCATTTCTAGTCTCACAGGTTGCCTTTCCAAGAGGCGGGAGAAAAAATAAGATGGCGGCGATTTATGTCGGCGGCATCTTTCGATCGAGGGAATCCCTTTTGAGCAGGGGATTCTTTTTTTGTGTTTCGTCCTCCGACGTTGTTTTGTGTCACTCCTTAAGAGGGGGGTGAAACAGTTAATAAATTTCTATAATTTTTTATAAAACTCTCTACAAAAATAATAAATTTTATGGTGTTATTTATGTAGGGAGTTGATTGTTGTGAAGTACTGTA # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //