Array 1 2265-3331 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QFUQ01000016.1 Klebsiella pneumoniae strain P008E S1 scaffold_000017, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
      2265	    29	  96.6	    32	............................A	AATACAGGACCAATATTTTGATATATATAATC 	
      2326	    29	 100.0	    32	.............................	GAGATTCTGGCAATACTGGCACTTCCGTTTTG 	
      2387	    29	  96.6	    32	............G................	GGCGGTTAACTGGTCCTGTGCGGATATGCGCT 	
      2448	    29	 100.0	    32	.............................	ATGTGGAAAGGCGAGCTGAGGGTGGCCTACGC 	
      2509	    29	 100.0	    32	.............................	GCTGAGGAAATTGCTAAACCCTCGCAGGATCC 	
      2570	    29	 100.0	    32	.............................	TTGCCGGTACAGCTCCAGCATTAATCCCCACC 	
      2631	    29	 100.0	    32	.............................	TTGCGACGTGGTGCGCGCTCGAGCACAACGTT 	
      2692	    29	 100.0	    32	.............................	ATGTAAACCCCTCGCGCATCGAGTCAAATGTC 	
      2753	    29	 100.0	    32	.............................	CCGGTGATTGCCTGTCCGTCGTGATACTGTGA 	
      2814	    29	 100.0	    32	.............................	CCACCTCAGCCTGCGCGCCCGCTGAATATTCC 	
      2875	    29	  96.6	    32	...........T.................	GGACGCGTTCCATCAGGGCGGGTCCAGGGAAT 	
      2936	    29	 100.0	    32	.............................	CAGGCGGCGCAGTGGCGCATGAATCCGTTCGC 	
      2997	    29	 100.0	    32	.............................	GAGTTTGTGAATTTAACAGAATTCCGCGCCCG 	
      3058	    29	 100.0	    32	.............................	TTCTTGCGGGCGTTGCAAATATTCTCCACGTA 	
      3119	    29	 100.0	    32	.............................	GTAATTAAATGTGGCAATCGTACACAGAAAGC 	
      3180	    29	 100.0	    33	.............................	GAACACCTACGCTAACGAGCAGTGGCTGAAAGG	
      3242	    29	  96.6	    32	............................A	GCCAATTGCCATATATGCCATCGCCAGCAGCC 	
      3303	    29	  96.6	     0	............................A	|                                	
==========	======	======	======	=============================	=================================	==================
        18	    29	  99.1	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   TGGATGAGCTATTAGCAACGCTGACCGATGATAAACCACGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACTCGTTTGTGCATTGAAACCTGCATTGCGCGTAACTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCATCCATCTTGCCCATCCTGAACTAATCATTATCATTCTCTACAAATTCTGTGGCGTTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
# Right flank :  ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCTGTACTTGTAATAAGCAACATATCCACATAACACCTCATGTTCAAAATAGTTCCCCATGCCAGATAAGTTCACAATTATCGATACAAAAAATCAAATTTAATCAAAGTGTTATTTGTATAATCCTTAAACCGTTAAGAAATTTTAATATATTATTTTTTTAATATTAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTGTATTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.24,0.41   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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