Array 1 99970-98357 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPOF01000008.1 Gordonibacter urolithinfaciens strain ResAG-26 ResAG26_contig_008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 99969 36 100.0 30 .................................... TGCATGTAAAGAATAATTTCGGAGTCATTG 99903 36 100.0 30 .................................... CCAGCACGCCGGACGCCAGCGCGTCCTGGC 99837 36 100.0 30 .................................... CAGCGCCGACGAGAAGGAGCTCACGGACAC 99771 36 100.0 30 .................................... AACCGTCGTGCCCCTTGAACACGATGATGG 99705 36 100.0 30 .................................... CATGGTGGGCAACGACCTCGTGCTGGGCCG 99639 36 100.0 29 .................................... TAGGCGAGACGGTGTACGCGCTGCAAGGC 99574 36 100.0 29 .................................... TTGGAATATGCACAAATGCCGATCAACAT 99509 36 100.0 30 .................................... CCTTGGCCGCAAGGCCAAACGCATCGGATA 99443 36 100.0 29 .................................... TTGCGCAGTAAGGCACACCGCTGGTCCCG 99378 36 100.0 30 .................................... GATACCCTTTGCTGGGATGATTATATATGG 99312 36 100.0 30 .................................... CTTCCTCGGCATCGAGAATGCGAACACCGA 99246 36 100.0 30 .................................... CTTCCTCGGCATCGAGAATGCGAACACCGA 99180 36 100.0 30 .................................... GGCAGAGAAGTACACGACAACGGTCAGTGC 99114 36 100.0 29 .................................... AGATCGACGAGGGTCGCCGCTGGATCTAC 99049 36 100.0 29 .................................... TCAAAAACGGAATCGTCCCTGTCGTGAAG 98984 36 100.0 30 .................................... GCCGGGGCGGCAGCTTCGGCCTTTTCTATT 98918 36 100.0 30 .................................... CCCGACCGAAAGGCCCAGTACATTCAGGCG 98852 36 97.2 29 ..........G......................... CCGAAAAGCTCCGGCTTATTGCACGAGGC 98787 36 97.2 30 .........T.......................... TAAACGGTTTGAAGGACGGCATCATGAGCG 98721 36 100.0 30 .................................... AAGCTCGCAAAGCTCGTCAGCGGAATCGCA 98655 36 100.0 30 .................................... GCCCGAGTTCTACGCCAACCGCTACAAAGA 98589 36 97.2 29 ...................T................ CCTCGCGCACGTACTCTCGCCTGTCAATG 98524 36 91.7 30 ..............G.......G.....G....... AAGCGGCTGATGCGCTCGTCGTATGTGCTG 98458 36 75.0 29 ..A..A.TA.G.....G...C.....T.......G. TCATCTTGGGCGCGTAGCCTTCGGTAGCC 98393 36 77.8 0 ..........G...G.TGG.G.........A....A | T [98359] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 97.4 30 GTTTTGGAGCAGTGACAAACTGACTGGTAGTCAAAC # Left flank : CGCTTATCGGCGAGGTGCTTGAGCGTTTGGAGGACATGGTTTTGTCCGAGGACGAGGTGCGCCAAGAAATCGAGGCGGCGGGCTTGGCTTTGTCGAACCGGGTGGCATCGCTCGGCCTGCGGCTTCAGTCGGACTACGCTTTTGAAGTACAATGGGAAATGCGAAAATACCTGAAGGCCTTCGATTTCGGCGTCGAGATCGATCCTTCCGACAAGCTCCTTGACAACTTGATAAAGTTCTTGAAGTTTGCGTCGGACGCTGCGTTCGAAAAGCAGTTGGTTTTCGTGAATTTGAAAAATTTTCTGACCGGGGAAGAGGTCGAAGAGTTCTATCGGCAAGCGATATTTTCGAAGTTGCACGTGCTGCTGCTTGAGAACGCGCCCGATGACGCAACGTATGAGATTGAGAGGAAAATGCGCATTGACGTGCATTTTCTGCAATCATGAAAAGTTATGCCAGCCGGTTGTCCGTTCTTCTGCAGAAAGAATTTTGCCCCAACG # Right flank : CGAATAGGGTGATCGACTCGCGGGCATCACTTTATTTCGGGGCGATTGCCTGTACCATAATAGGGATAGATAGTTTATACTCGCACGTAGGGATTGCAAGCGAACCTGTTGCGAGGAGGAACCATGGCCGTCAACCGTCAGAAGCTCAAGCTGCTGTATCTCATGCGGATGCTCGAGGAGGAGACCGACGCCGAGCAGGGCCTCACGATGTCGCAGATCCTCGAGCGGCTGGAGGCGCAGGGCATCACGGCCGAGCGCAAAGGCATCTACCGCGACATCGAGGCGCTGCGCGAGTTCGGCCTGGACGTGCGCACCTACCAGCGCGCGCCGGTGGAGTATGCGCTGGAACGGCGCGACTTCGCCTTCCATGAGCTGTTGCTGCTGGTGGATGCCGTGCAGAGCTCGCGCTTCCTCACGCAGCGCAAGAGCGACGCGTTGGTCGAGGCCGTGAAGAGGCTCGCGTCCGCCCGCCAGCGCGCGCTGCTCGACAAGCGCCTGCA # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGAGCAGTGACAAACTGACTGGTAGTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [24-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 59177-60396 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPOF01000007.1 Gordonibacter urolithinfaciens strain ResAG-26 ResAG26_contig_007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 59177 32 100.0 34 ................................ ATCGACCACATCTATCAGGCGTCCGCGCAGACGC 59243 32 100.0 34 ................................ CTGGACCGGGTGCTGCTGCACGAGGCGGCGCACT 59309 32 100.0 34 ................................ TCCATGTGCCGCGCCACGCGCAGCAGGGCCGAGT 59375 32 100.0 34 ................................ ATCGACCACATCTATCAGGCGTCCGCGCAGACGC 59441 32 100.0 33 ................................ CTCTTGAGGATCGAGCGGTAGGTCGAGCCGTGC 59506 32 100.0 34 ................................ TTCTTCGATATGCTGGCCAAGACCGCCCACAAAC 59572 32 100.0 33 ................................ ATTTCGCCCTCTCCGTTTCCTCGTGTCACGCCG 59637 32 100.0 33 ................................ TCCGTGTCGTACCGCTTGCCGTTTATGGTCTTG 59702 32 100.0 33 ................................ CAATGGACTCGTACTTTGATAATCACGCCGGAC 59767 32 100.0 36 ................................ AACGAAGCGGTTGACGCCGTTGTAGTTAACGGGGAT 59835 32 100.0 34 ................................ CACAGGCTGGAGCGGCCTGCGGTGAACTCCTTGG 59901 32 100.0 33 ................................ TCTCTGCTCGAAGCGGGTGCCCAGGGCGGCGCG 59966 32 100.0 35 ................................ TCCTTGGTGGCCGCAGGAATTGCCGCCGGCTGGAT 60033 32 100.0 34 ................................ TCCATGGTGACATGTTGGTGACACCGGGTAGGCA 60099 32 100.0 35 ................................ CACCAGCCCGTGCGCTCGCCCGACGAGGTGGCGCG 60166 32 100.0 34 ................................ AAAAAAGTATCAATACGGAGAAGGTTACACATGG 60232 32 100.0 34 ................................ CGCGGTATCGGCGTCTACGTGGACGAGGGCCTCG 60298 32 81.2 34 ......T..TCGC..................C TCGAAAGAGAGCGCCGAGTGGTAGCCTGAGCCGT T [60304] 60365 32 81.2 0 ..T..A...TTCG................... | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 98.0 34 GTCGCGCCCCATAGGGGCGCGTGGGTTGAAAT # Left flank : GGTCCCTGCATCGGCTCGGTCGGGCTCATCCCCGACCCGCAGCGGCGCAACGTCGATGCCCTCATGCTGGGGTACTCCCTGGCGAAGCCCGCCTGGGGCCGGGGCTACATGACGGAGGCGTCGCGCGAGGTTATCCGCTACGGTTTCGAGGAGCTGGCCCTCGGCCTGATCTCCTGCACGCATTACCTGTTCAACGATCGCTCTCGACGCGTCATCGAGAAGTGCGGCTTCGAACGCGAGGGCGTCATCCATCGCGCCGAGCCCGCTCCCGACGGCACCATGCAGGACCTGGCGACGTACTATCTGACGCGCGCGTCATGGGAGGAGGTCTCGCGCGAGAGCGCGCGAAACGGCGCGAACCCGAAGCTCTGGCAGTCCACTCAAGAGGTTCGCGCAGAATGACACGCCCAGAGGGATAGCTTGCTGGTTGCGCAAGGTGCTACGCATCTTGAAAAATGAATACTATAAGTGAAAAATGCACTATCCTGCATAAACTGCCA # Right flank : TGCCGCTGCGCTAGCTTCCGATAAAACGAGTGATAGGCCTCGGCCTCTGCGAAGCTACCTGATTTGTCACTGCTGCAGTTGCGAAAGGGCTGTGAATTGGGTGCGCACCGTAGCGGTATCGCGCTCTTAGCACCGGTTTCGACAGACATTTGCGTCCCCATGCTACAATGCGCTCATGATGCGCGAGAGCGACATATACGAGCTGCGGCTGTTCGATCGGATCCTGATCGTCTTTCGCATGTCGCGCGGCGAATACGGTGATCTTTCAGTTGAGGTTCTCTCGGCAGACTCGTCGGCAAGTAGCCTTCTTCCGTTGTCGTTCGATGGAGAGCCAACCGACGAGCGTCTCTTCGAATGGATTCGTCGACGGCGCATCCCGAAGAATCGCGCCTATGTTGACGAGATACTCAAGTCGTGCGGCATCGAGTCCGACGATGCGAAATCGATCATCGATGTGAGCAAGGGCCTTTCGCTCAACGATTCCTATTGGGTTGTTCCTC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCATAGGGGCGCGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.30,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 69951-71475 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPOF01000007.1 Gordonibacter urolithinfaciens strain ResAG-26 ResAG26_contig_007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 69951 31 100.0 34 ............................... CCGCAATCGCACCGACAACGCCAAACGACGGAGC 70016 31 100.0 33 ............................... ATCAGCACGGTGCACCCCATGCACTACCGCGTG 70080 31 100.0 32 ............................... TCCGTGGACTCCTACGCCGACGTTGTCGAGGC 70143 31 100.0 35 ............................... TCCATGTGCCGCGCCACGCGCAGCAGGGCCGAGTG 70209 31 100.0 35 ............................... TCCTTGGTCGCGCCGAGGATCAGGTTGAGGCCGCG 70275 31 100.0 33 ............................... TCCTCCAGCACCGACTCCTGCAGCGACCCGTCG 70339 31 100.0 35 ............................... CCTGGAGCCACTCCCACAGGTCGTACACCCCCTTC 70405 31 100.0 33 ............................... ATAATCGTCCGCAACGCCGGGATGGTGGTCGTG 70469 31 100.0 33 ............................... CTCTCGCAGAATCCCACGCGTTTTCGCGTGGTA 70533 31 100.0 34 ............................... CATGTCACGATCGACGTGAGCATACTCGCCGTCC 70598 31 100.0 34 ............................... CTCGAAGCAATACGTTTTCGCGCGAAGGGCCTTG 70663 31 100.0 33 ............................... GGTACACCAACACATGGCTCGTGACCGAGGAGA 70727 31 100.0 33 ............................... TTGATATCGCAGATGCCCGTGGGCACCCATATG 70791 31 100.0 35 ............................... CCGAGCTGGCCGCGCTCTCGCGCGAGGAGGTGCTG 70857 31 100.0 33 ............................... AAGCGCAACGGCGTGCCGAGCCGCTACGCATCG 70921 31 96.8 36 ..........T.................... AAGAAGGGGCAGCAGGTGGACGCTCCGCCCGCTCTG 70988 31 100.0 33 ............................... TGAAAATAACCCTTTACCAGAGTCAATACCTTG 71052 31 100.0 37 ............................... TGGACGTATGTCGAGCTCTCCAGACCGAGCCCGGCGC 71120 31 100.0 33 ............................... ACGGACGGCGACGATTACATGGACGCCGTGGGG 71184 31 100.0 34 ............................... TTCGTCTCTTACGTTTGCGCGTAGCCTTCGGTAT 71249 31 100.0 35 ............................... GTCATCACCCGCAACGCCGGGATGGTGGTCGTGTC 71315 31 100.0 35 ............................... CAAAGCTGCTTTTCCGGTGCCACGAACTCGCCGCC 71381 31 100.0 33 ............................... CTCGTAGTGGCGCCGGATGTGACACATGGCGTC 71445 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ===================================== ================== 24 31 99.9 34 GTCGAGCCCTCACGGGCTCGCGGGTTGAAAC # Left flank : GTTCATTTGGAGGTAGCGATGTACGTGCTCGTTACGTACGATGTGGAAACGGCAAGCCCGCAGGGATCTCGCCGGTTGCGCCGGGTTGCGAAGATTTGCGTGCAGTATGGCCAACGCGTGCAGAACTCGGTGTTCGAATGTTCGCTCGATCCGGCGCAGTTTGAGACAATGAAGAGCGAGCTGATGAAGGCGGCCGACCTGACGCGTGACAGCCTACGGTTCTACAATCTCGGGAAGAACTGGAAGCGAAAAGTCGAGCACGTGGGAGCAAAGGAGGCTTATGACCCGGAAGGGCTCCTATGCGTGTGAGAGGAAATGCGCACCTTGACAATGTAGAAGCTCTATTGCGTGCTGCGCGAACCCCAAGCGATGGCGCGCCATTCGGGAGGTTCGCGCAGGTTTTAAGCTTCATAAGCCCGCTGATAGCTGTTCATGGGGCGGACTGATTGTCTAATGTGAATATGATAATCAGAATATACGTATATATGCATATCCTGACA # Right flank : CCTCATGGGGGCAGCAGCCGGCATCGACCAGCTGTGTACGCCCGCCCGACTCCGCGCACATGCTATGTCGCACCCCTCGACGGGCGGTAGCGACGAGCGGCGAGCCGGCTAGCGCAATCCCGGCTACCTGCAAGGAGGCTCGGCGAAGGTTGGAGCTTGCGGCGATCTCCAAGCAGTTGGTCTATAATTCTCGTTCGTAGAAAAACGGGAGAAGGGGATCCATGGCGTCGGTGAAGCAGCAGGCAGGGCGCGCCTTAAGGCGGTTGGCGCGGAAGAACCCGCTTGCCGCCCTCGCCATTGCGGCCGTGCTCGTGATCGGTGCCGCGCTTGGATGGTTCGGCGCTGCGGGCGGCGGGGTCGCGGAGGATGCCGCGCCGGGCCGAGACGGCCAAGCGACTATCGCCCCCGTAGGGGACGGTCTCCAGCAAGCCCAGGTCGTGCGCGTGGTCGACGGCGACACGCTCAAGGTGAGCGTGCCTGGCGAAGCGGACGCCACGGTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGCCCTCACGGGCTCGCGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //