Array 1 6439409-6440534 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KQ031391.1 Frankia sp. DC12 FraDC12DRAFT_scaffold1.1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
   6439409	    28	 100.0	    33	............................	ACCGCGTGGTGGTACTCATCCTCTGTGAAAACG	
   6439470	    28	  92.9	    33	.......T......G.............	GAAGGCAGCCACGACGCCCTCTCACTCGATCAG	
   6439531	    28	 100.0	    33	............................	CGCTGGCCGGTCACACCCGACAGGCCGACTCCG	
   6439592	    28	 100.0	    33	............................	GCAGGCGCCGACGACGGTGACCGGTGACAGTGC	
   6439653	    28	 100.0	    33	............................	CCGGCCGCGACGTCGGCGACCGCGGTCCCGGTG	
   6439714	    28	 100.0	    33	............................	GCGCCCACGTCTACGCCCCCCGGCAGCTCACCG	
   6439775	    28	 100.0	    33	............................	CATGTCCAGACCAAGGGCCAGGAGAATGGTTTC	
   6439836	    28	 100.0	    33	............................	GGAGCCCACTGGCTGAACTCATTGCCGACTGAG	
   6439897	    28	 100.0	    33	............................	TCGATCTCACCAAGCAGATACTCCCGTTCGCCC	
   6439958	    28	 100.0	    33	............................	AGCCACGTAGAGAGAGTCCAAAACAGTTCTGGA	
   6440019	    28	 100.0	    33	............................	GTACGCACTCATGATCTCTTTTGCCCCCGGAAA	
   6440080	    28	 100.0	    33	............................	CCTGTGGCGCCTACTAAGGCAGCTAGCTCACTC	
   6440141	    28	 100.0	    33	............................	GGAACCGCGAAGAGTAGTCAGAGCATGGCCCCC	
   6440202	    28	 100.0	    33	............................	GCGGAAGTCTCGGCGACCATCTTCTCTGATGGC	
   6440263	    28	  96.4	    33	.A..........................	AATACCAGGAAGCGGATACCGCAACCCGCCGAC	
   6440324	    28	 100.0	    33	............................	AGCCCGTGACACCATGCCCGGCCGCAATGACGT	
   6440385	    28	 100.0	    33	............................	TCGCACAACGAATACAGCATGTCAGCAGACCTC	
   6440446	    28	 100.0	    33	............................	TAGAGCAGAGAGCCCTGAGGCGAGGAGCTGTAG	
   6440507	    28	 100.0	     0	............................	|                                	
==========	======	======	======	============================	=================================	==================
        19	    28	  99.4	    33	GGAAGATCCCCGCGCGGGCGGGGACGAC	                                 	       

# Left flank :   TAGAATTGGGTGTGGTTGGTACCCTGTTACCTGTGGCACCCACACCCAGTTTAAAGTCCAAGGGCGGTAAGTTGAATTTCACTGAGGCATCAGAGGCTGTCCTTCGGCGGCGAAATCAGATAGCTGATCGAGTTTGCAGCGAGCTCCAACTGGCCGGGATACCGGCGTTCCGCATTGAGCAGAATCTAGAACTTGCGGGCGCGGAGGTGCATGTCGACGCTGGCGATGACCCGTCGGGTGGCGTATTCATAGAATGGCGCGCGAGTGCTATGCTAATGAATTCTATTGCCGAAAGTGCTCGCAACAAGGACTTTGGCGCCGACGCCATTAGGCACATGGGTGTAGTGGCGGCTCGTATGTGCGATGCGATTGTGGCGATTCTCTGTTCGGTTGGATTGCGCGCATTCCCTGCGGACGATGAAATGCGGCCGTTCGCCGTACGCGTCGAGGAGTGAGGTTTTCCGGACACCTGCCGGGCGGCAACGGCGCCCGGCCCGGGG
# Right flank :  CACTTGCTGAGCTGCGAGTTTATCGCTTGAGGGCGGGAATGCGTATCGGTCCGTCGGCGCGGATCTCGCGCGTTCGGTCGGACTGCGCTGTGGCTCCGTTGTTGGTGGCGCTCGGCGATGTGCAGGCTGAGCCGTCAGGGCCTGGTCGGGTGGGCGGGTGCTTCCTTCGGTTGGCCATCGTAGGCGCCCTGCTCGGTGGTCGGGCCGTCGAATGAGTCCTCGTTGTCGGCATGGCGGCCTGCGGCAGGTGGTCCGGGCTCGTGTCGCTCGGGCGATGGCCTCAGCGAGGGCGGACCTGCTGAGGGTTTTCCACAGCCGTTCGCGTGGGCTGGTGTACTTCGGGCTCGTGATGTTGGACTGAAGGTCGCGCAGGTGGCCCGAACGGAGGTGCGGTGATGGATCGGGACGAGGCGCGGTTCGAATCGATGGCTGATGTCGATCTTCTCGGCGCTTTGGATGTCGCCTGGTGGCGTGGGGTGTCGACGGAGTTGATGGCCGGG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GGAAGATCCCCGCGCGGGCGGGGACGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,1] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-13.00,-12.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [23.3-38.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.74,0.68   Confidence: LOW] 

# Array family : NA
//